RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 PSME1Q06323 249 aa21.38■■□□□ 1.01
GAPDHP40-201ENST00000505218 COL16A1Q07092 1604 aaPredicted RBP21.37■■□□□ 1.01
GAPDHP40-201ENST00000505218 SPATA31A3Q5VYP0 1347 aa21.36■■□□□ 1.01
GAPDHP40-201ENST00000505218 TTC21AQ8NDW8 1320 aa21.35■■□□□ 1.01
GAPDHP40-201ENST00000505218 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
GAPDHP40-201ENST00000505218 TNS3Q68CZ2 1445 aa21.34■■□□□ 1.01
GAPDHP40-201ENST00000505218 NSD3Q9BZ95 1437 aa21.34■■□□□ 1.01
GAPDHP40-201ENST00000505218 USP31Q70CQ4 1352 aa21.34■■□□□ 1.01
GAPDHP40-201ENST00000505218 DDX10Q13206 875 aaKnown RBP21.33■■□□□ 1.01
GAPDHP40-201ENST00000505218 AMER1Q5JTC6 1135 aaPredicted RBP21.33■■□□□ 1.01
GAPDHP40-201ENST00000505218 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
GAPDHP40-201ENST00000505218 ALS2Q96Q42 1657 aa21.32■■□□□ 1
GAPDHP40-201ENST00000505218 LRRC59Q96AG4 307 aaKnown RBP21.32■■□□□ 1
GAPDHP40-201ENST00000505218 NPC1L1Q9UHC9 1359 aa21.32■■□□□ 1
GAPDHP40-201ENST00000505218 FYB1O15117 783 aa21.31■■□□□ 1
GAPDHP40-201ENST00000505218 HSPA1LP34931 641 aa21.31■■□□□ 1
GAPDHP40-201ENST00000505218 PHLPP1O60346 1717 aa21.29■■□□□ 1
GAPDHP40-201ENST00000505218 USP54Q70EL1 1684 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 ARHGEF10O15013 1369 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 PNPLA6Q8IY17 1366 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 OVOS2A0A0J9YW53 1432 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 OVOS2Q6IE36 1432 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 USP19O94966 1318 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 PIK3C2AO00443 1686 aa21.28■■□□□ 1
GAPDHP40-201ENST00000505218 MED1Q15648 1581 aaPredicted RBP21.27■■□□□ 1
GAPDHP40-201ENST00000505218 NME9Q86XW9 330 aa21.27■■□□□ 1
GAPDHP40-201ENST00000505218 KNSTRNQ9Y448 316 aa21.27■■□□□ 1
GAPDHP40-201ENST00000505218 NSD2O96028 1365 aa21.26■□□□□ 0.99
GAPDHP40-201ENST00000505218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.26■□□□□ 0.99
GAPDHP40-201ENST00000505218 ABTB2Q8N961 1025 aa21.25■□□□□ 0.99
GAPDHP40-201ENST00000505218 ZRANB1Q9UGI0 708 aa21.25■□□□□ 0.99
GAPDHP40-201ENST00000505218 COL22A1Q8NFW1 1626 aaPredicted RBP21.25■□□□□ 0.99
GAPDHP40-201ENST00000505218 PAK3O75914 559 aaPredicted RBP21.24■□□□□ 0.99
GAPDHP40-201ENST00000505218 JCADQ9P266 1359 aa21.23■□□□□ 0.99
GAPDHP40-201ENST00000505218 MARF1Q9Y4F3 1742 aaKnown RBP21.23■□□□□ 0.99
GAPDHP40-201ENST00000505218 SLIT3O75094 1523 aa21.23■□□□□ 0.99
GAPDHP40-201ENST00000505218 NLRP13Q86W25 1043 aa21.22■□□□□ 0.99
GAPDHP40-201ENST00000505218 NLRP6P59044 892 aa21.21■□□□□ 0.99
GAPDHP40-201ENST00000505218 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
GAPDHP40-201ENST00000505218 CRYBG1Q9Y4K1 1723 aa21.21■□□□□ 0.99
GAPDHP40-201ENST00000505218 SHPRHQ149N8 1683 aa21.2■□□□□ 0.98
GAPDHP40-201ENST00000505218 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
GAPDHP40-201ENST00000505218 COG3Q96JB2 828 aa21.17■□□□□ 0.98
GAPDHP40-201ENST00000505218 KIF20BQ96Q89 1820 aa21.17■□□□□ 0.98
GAPDHP40-201ENST00000505218 NFAT5O94916 1531 aa21.16■□□□□ 0.98
GAPDHP40-201ENST00000505218 AATKQ6ZMQ8 1374 aa21.16■□□□□ 0.98
GAPDHP40-201ENST00000505218 GCP02774 474 aa21.16■□□□□ 0.98
GAPDHP40-201ENST00000505218 PARD3Q8TEW0 1356 aa21.15■□□□□ 0.98
GAPDHP40-201ENST00000505218 SPATA31A6Q5VVP1 1343 aa21.15■□□□□ 0.98
GAPDHP40-201ENST00000505218 LMOD2Q6P5Q4 547 aa21.15■□□□□ 0.98
GAPDHP40-201ENST00000505218 CABLES1Q8TDN4 633 aa21.14■□□□□ 0.97
GAPDHP40-201ENST00000505218 ANKRD26Q9UPS8 1709 aa21.14■□□□□ 0.97
GAPDHP40-201ENST00000505218 CPDO75976 1380 aa21.13■□□□□ 0.97
GAPDHP40-201ENST00000505218 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
GAPDHP40-201ENST00000505218 PHRF1Q9P1Y6 1649 aaKnown RBP21.13■□□□□ 0.97
GAPDHP40-201ENST00000505218 ABCA3Q99758 1704 aa21.12■□□□□ 0.97
GAPDHP40-201ENST00000505218 CC2D1BQ5T0F9 858 aaKnown RBP21.12■□□□□ 0.97
GAPDHP40-201ENST00000505218 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
GAPDHP40-201ENST00000505218 ARHGEF25Q86VW2 580 aa21.11■□□□□ 0.97
GAPDHP40-201ENST00000505218 ILDR1Q86SU0 546 aaPredicted RBP21.1■□□□□ 0.97
GAPDHP40-201ENST00000505218 LRP6O75581 1613 aa21.09■□□□□ 0.97
GAPDHP40-201ENST00000505218 PRKRIP1Q9H875 184 aaPredicted RBP21.09■□□□□ 0.97
GAPDHP40-201ENST00000505218 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
GAPDHP40-201ENST00000505218 FBLN1P23142 703 aa21.08■□□□□ 0.97
GAPDHP40-201ENST00000505218 RALBP1Q15311 655 aa21.08■□□□□ 0.97
GAPDHP40-201ENST00000505218 POLKQ9UBT6 870 aa21.07■□□□□ 0.96
GAPDHP40-201ENST00000505218 KIF24Q5T7B8 1368 aa21.06■□□□□ 0.96
GAPDHP40-201ENST00000505218 MAP3K19Q56UN5 1328 aa21.05■□□□□ 0.96
GAPDHP40-201ENST00000505218 KIAA0232Q92628 1395 aa21.05■□□□□ 0.96
GAPDHP40-201ENST00000505218 ABCC6O95255 1503 aa21.04■□□□□ 0.96
GAPDHP40-201ENST00000505218 INSRP06213 1382 aa21.04■□□□□ 0.96
GAPDHP40-201ENST00000505218 FAM83GA6ND36 823 aa21.03■□□□□ 0.96
GAPDHP40-201ENST00000505218 PPP2R1AP30153 589 aa21.03■□□□□ 0.96
GAPDHP40-201ENST00000505218 ZC3H6P61129 1189 aaKnown RBP21.03■□□□□ 0.96
GAPDHP40-201ENST00000505218 RTL1A6NKG5 1358 aa21.02■□□□□ 0.96
GAPDHP40-201ENST00000505218 RRS1Q15050 365 aaKnown RBP21.02■□□□□ 0.96
GAPDHP40-201ENST00000505218 COL18A1P39060 1754 aa21.02■□□□□ 0.96
GAPDHP40-201ENST00000505218 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
GAPDHP40-201ENST00000505218 IP6K1Q92551 441 aa21.01■□□□□ 0.95
GAPDHP40-201ENST00000505218 EMILIN1Q9Y6C2 1016 aa21.01■□□□□ 0.95
GAPDHP40-201ENST00000505218 LMO7Q8WWI1 1683 aa21.01■□□□□ 0.95
GAPDHP40-201ENST00000505218 TNNT2P45379 298 aaPredicted RBP21■□□□□ 0.95
GAPDHP40-201ENST00000505218 SLIT2O94813 1529 aa20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 PEAK1Q9H792 1746 aa20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 NUTM2BA6NNL0 878 aaPredicted RBP20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 NUTM2EB1AL46 878 aaPredicted RBP20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 SOX12O15370 315 aa20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 NUTM2AQ8IVF1 878 aaPredicted RBP20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 AXIN2Q9Y2T1 843 aa20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 MYBBP1AQ9BQG0 1328 aaKnown RBP20.99■□□□□ 0.95
GAPDHP40-201ENST00000505218 PLEKHG5O94827 1062 aa20.98■□□□□ 0.95
GAPDHP40-201ENST00000505218 HOXC9P31274 260 aa20.98■□□□□ 0.95
GAPDHP40-201ENST00000505218 MTHFSP49914 203 aa20.98■□□□□ 0.95
GAPDHP40-201ENST00000505218 FNBP4Q8N3X1 1017 aaPredicted RBP20.98■□□□□ 0.95
GAPDHP40-201ENST00000505218 FLT4P35916 1363 aa20.97■□□□□ 0.95
GAPDHP40-201ENST00000505218 CDK12Q9NYV4 1490 aaPredicted RBP20.97■□□□□ 0.95
GAPDHP40-201ENST00000505218 ANP32CO43423 234 aa20.97■□□□□ 0.95
GAPDHP40-201ENST00000505218 ADAMTS2O95450 1211 aa20.97■□□□□ 0.95
GAPDHP40-201ENST00000505218 HAP1P54257 671 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms