RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SEPT12Q8IYM1 358 aa12.84□□□□□ -0.35
TPM3-218ENST00000505010 ITSN1Q15811 1721 aa12.84□□□□□ -0.35
TPM3-218ENST00000505010 LRP5O75197 1615 aa12.84□□□□□ -0.35
TPM3-218ENST00000505010 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
TPM3-218ENST00000505010 XPCQ01831 940 aaPredicted RBP12.83□□□□□ -0.36
TPM3-218ENST00000505010 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
TPM3-218ENST00000505010 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
TPM3-218ENST00000505010 PANK3Q9H999 370 aa12.82□□□□□ -0.36
TPM3-218ENST00000505010 FMN2Q9NZ56 1722 aa12.82□□□□□ -0.36
TPM3-218ENST00000505010 BAG6P46379 1132 aa12.81□□□□□ -0.36
TPM3-218ENST00000505010 KRT27Q7Z3Y8 459 aa12.81□□□□□ -0.36
TPM3-218ENST00000505010 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
TPM3-218ENST00000505010 CDK19Q9BWU1 502 aa12.81□□□□□ -0.36
TPM3-218ENST00000505010 RGPD8O14715 1765 aaPredicted RBP12.8□□□□□ -0.36
TPM3-218ENST00000505010 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
TPM3-218ENST00000505010 CCDC9Q9Y3X0 531 aaKnown RBP12.8□□□□□ -0.36
TPM3-218ENST00000505010 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
TPM3-218ENST00000505010 NINLQ9Y2I6 1382 aa12.8□□□□□ -0.36
TPM3-218ENST00000505010 PXDNQ92626 1479 aa12.79□□□□□ -0.36
TPM3-218ENST00000505010 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
TPM3-218ENST00000505010 SLIT2O94813 1529 aa12.79□□□□□ -0.36
TPM3-218ENST00000505010 GLI3P10071 1580 aa12.79□□□□□ -0.36
TPM3-218ENST00000505010 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
TPM3-218ENST00000505010 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
TPM3-218ENST00000505010 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
TPM3-218ENST00000505010 CNGB1Q14028 1251 aaPredicted RBP12.79□□□□□ -0.36
TPM3-218ENST00000505010 VPS72Q15906 364 aa12.79□□□□□ -0.36
TPM3-218ENST00000505010 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
TPM3-218ENST00000505010 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
TPM3-218ENST00000505010 ATP7BP35670 1465 aa12.78□□□□□ -0.36
TPM3-218ENST00000505010 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
TPM3-218ENST00000505010 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
TPM3-218ENST00000505010 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.36
TPM3-218ENST00000505010 NUTM2FA1L443 756 aa12.77□□□□□ -0.37
TPM3-218ENST00000505010 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.37
TPM3-218ENST00000505010 BRWD3Q6RI45 1802 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 A0A0G2JS52 829 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 MYT1Q01538 1121 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 SLC12A5Q9H2X9 1139 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
TPM3-218ENST00000505010 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 ANKRD36BQ8N2N9 1353 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 PPIP5K1Q6PFW1 1433 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
TPM3-218ENST00000505010 EN1Q05925 392 aaPredicted RBP12.75□□□□□ -0.37
TPM3-218ENST00000505010 R3HDM1Q15032 1099 aaKnown RBP12.75□□□□□ -0.37
TPM3-218ENST00000505010 KNSTRNQ9Y448 316 aa12.75□□□□□ -0.37
TPM3-218ENST00000505010 CD163L1Q9NR16 1453 aa12.74□□□□□ -0.37
TPM3-218ENST00000505010 A0A1W2PP64 1363 aa12.74□□□□□ -0.37
TPM3-218ENST00000505010 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
TPM3-218ENST00000505010 YY1P25490 414 aa12.74□□□□□ -0.37
TPM3-218ENST00000505010 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
TPM3-218ENST00000505010 PRR36Q9H6K5 1346 aa12.73□□□□□ -0.37
TPM3-218ENST00000505010 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
TPM3-218ENST00000505010 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
TPM3-218ENST00000505010 NUDT16Q96DE0 195 aaKnown RBP12.73□□□□□ -0.37
TPM3-218ENST00000505010 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
TPM3-218ENST00000505010 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
TPM3-218ENST00000505010 CABLES1Q8TDN4 633 aa12.72□□□□□ -0.37
TPM3-218ENST00000505010 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
TPM3-218ENST00000505010 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
TPM3-218ENST00000505010 NRKQ7Z2Y5 1582 aa12.72□□□□□ -0.37
TPM3-218ENST00000505010 ANKARQ7Z5J8 1434 aa12.71□□□□□ -0.37
TPM3-218ENST00000505010 PSME1Q06323 249 aa12.71□□□□□ -0.37
TPM3-218ENST00000505010 RALBP1Q15311 655 aa12.71□□□□□ -0.37
TPM3-218ENST00000505010 FAM98CQ17RN3 349 aaKnown RBP12.71□□□□□ -0.37
TPM3-218ENST00000505010 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
TPM3-218ENST00000505010 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.37
TPM3-218ENST00000505010 NPC1L1Q9UHC9 1359 aa12.7□□□□□ -0.38
TPM3-218ENST00000505010 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
TPM3-218ENST00000505010 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
TPM3-218ENST00000505010 FAM83GA6ND36 823 aa12.69□□□□□ -0.38
TPM3-218ENST00000505010 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
TPM3-218ENST00000505010 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
TPM3-218ENST00000505010 MYBBP1AQ9BQG0 1328 aaKnown RBP12.68□□□□□ -0.38
TPM3-218ENST00000505010 CPSF1Q10570 1443 aaKnown RBP12.68□□□□□ -0.38
TPM3-218ENST00000505010 NSD2O96028 1365 aa12.68□□□□□ -0.38
TPM3-218ENST00000505010 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
TPM3-218ENST00000505010 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
TPM3-218ENST00000505010 EZH2Q15910 746 aaKnown RBP12.67□□□□□ -0.38
TPM3-218ENST00000505010 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
TPM3-218ENST00000505010 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
TPM3-218ENST00000505010 TNS3Q68CZ2 1445 aa12.66□□□□□ -0.38
TPM3-218ENST00000505010 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
TPM3-218ENST00000505010 MRS2Q9HD23 443 aa12.66□□□□□ -0.38
TPM3-218ENST00000505010 BTG4Q9NY30 223 aa12.66□□□□□ -0.38
TPM3-218ENST00000505010 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
TPM3-218ENST00000505010 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
TPM3-218ENST00000505010 ACEP12821 1306 aa12.64□□□□□ -0.39
TPM3-218ENST00000505010 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
TPM3-218ENST00000505010 ARHGEF10O15013 1369 aa12.64□□□□□ -0.39
TPM3-218ENST00000505010 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
TPM3-218ENST00000505010 PLCH1Q4KWH8 1693 aa12.64□□□□□ -0.39
TPM3-218ENST00000505010 DISP2A7MBM2 1401 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 USP6P35125 1406 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 MORC1Q86VD1 984 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 NLRP13Q86W25 1043 aa12.63□□□□□ -0.39
TPM3-218ENST00000505010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms