RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-255	ENST00000504927	ZNF772	Q68DY9	489 aa	Predicted RBP	29	■■■□□ 2.23
DDR1-255	ENST00000504927	TMF1	P82094	1093 aa		28.99	■■■□□ 2.23
DDR1-255	ENST00000504927	HAP1	P54257	671 aa	Predicted RBP	28.98	■■■□□ 2.23
DDR1-255	ENST00000504927	NGLY1	Q96IV0	654 aa		28.98	■■■□□ 2.23
DDR1-255	ENST00000504927	ALS2	Q96Q42	1657 aa		28.98	■■■□□ 2.23
DDR1-255	ENST00000504927	ABCA3	Q99758	1704 aa		28.97	■■■□□ 2.23
DDR1-255	ENST00000504927	MARF1	Q9Y4F3	1742 aa	Known RBP	28.97	■■■□□ 2.23
DDR1-255	ENST00000504927	CDCA8	Q53HL2	280 aa		28.96	■■■□□ 2.23
DDR1-255	ENST00000504927	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.94	■■■□□ 2.22
DDR1-255	ENST00000504927	ABTB2	Q8N961	1025 aa		28.94	■■■□□ 2.22
DDR1-255	ENST00000504927	TMC1	Q8TDI8	760 aa		28.94	■■■□□ 2.22
DDR1-255	ENST00000504927	CABLES1	Q8TDN4	633 aa		28.94	■■■□□ 2.22
DDR1-255	ENST00000504927	PLEKHG5	O94827	1062 aa		28.93	■■■□□ 2.22
DDR1-255	ENST00000504927	USP6	P35125	1406 aa		28.92	■■■□□ 2.22
DDR1-255	ENST00000504927	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.91	■■■□□ 2.22
DDR1-255	ENST00000504927	CPSF1	Q10570	1443 aa	Known RBP	28.9	■■■□□ 2.22
DDR1-255	ENST00000504927	SLC12A5	Q9H2X9	1139 aa		28.9	■■■□□ 2.22
DDR1-255	ENST00000504927	NINL	Q9Y2I6	1382 aa		28.89	■■■□□ 2.22
DDR1-255	ENST00000504927	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.89	■■■□□ 2.22
DDR1-255	ENST00000504927	NLRP13	Q86W25	1043 aa		28.89	■■■□□ 2.22
DDR1-255	ENST00000504927	TERF2IP	Q9NYB0	399 aa		28.89	■■■□□ 2.22
DDR1-255	ENST00000504927	CRYBG1	Q9Y4K1	1723 aa		28.88	■■■□□ 2.21
DDR1-255	ENST00000504927	KTN1	Q86UP2	1357 aa	Known RBP	28.87	■■■□□ 2.21
DDR1-255	ENST00000504927	SSH2	Q76I76	1423 aa		28.86	■■■□□ 2.21
DDR1-255	ENST00000504927	USP21	Q9UK80	565 aa		28.86	■■■□□ 2.21
DDR1-255	ENST00000504927	NUTM2G	Q5VZR2	741 aa		28.85	■■■□□ 2.21
DDR1-255	ENST00000504927	TTC21B	Q7Z4L5	1316 aa		28.85	■■■□□ 2.21
DDR1-255	ENST00000504927	TTC21A	Q8NDW8	1320 aa		28.85	■■■□□ 2.21
DDR1-255	ENST00000504927	HSPA5	P11021	654 aa	Known RBP	28.84	■■■□□ 2.21
DDR1-255	ENST00000504927	QTRT2	Q9H974	415 aa	Known RBP	28.84	■■■□□ 2.21
DDR1-255	ENST00000504927	BCL9L	Q86UU0	1499 aa		28.84	■■■□□ 2.21
DDR1-255	ENST00000504927	NLRP6	P59044	892 aa		28.82	■■■□□ 2.2
DDR1-255	ENST00000504927	FAM83G	A6ND36	823 aa		28.81	■■■□□ 2.2
DDR1-255	ENST00000504927	SLIT2	O94813	1529 aa		28.8	■■■□□ 2.2
DDR1-255	ENST00000504927	RXRB	P28702	533 aa		28.8	■■■□□ 2.2
DDR1-255	ENST00000504927	TRPC5	Q9UL62	973 aa	Predicted RBP	28.8	■■■□□ 2.2
DDR1-255	ENST00000504927	PLCH1	Q4KWH8	1693 aa		28.8	■■■□□ 2.2
DDR1-255	ENST00000504927	CD163L1	Q9NR16	1453 aa		28.79	■■■□□ 2.2
DDR1-255	ENST00000504927	ATRN	O75882	1429 aa		28.79	■■■□□ 2.2
DDR1-255	ENST00000504927	USP19	O94966	1318 aa		28.79	■■■□□ 2.2
DDR1-255	ENST00000504927	UNC5CL	Q8IV45	518 aa		28.78	■■■□□ 2.2
DDR1-255	ENST00000504927	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.77	■■■□□ 2.2
DDR1-255	ENST00000504927	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.77	■■■□□ 2.2
DDR1-255	ENST00000504927	AKAP12	Q02952	1782 aa		28.76	■■■□□ 2.19
DDR1-255	ENST00000504927	GC	P02774	474 aa		28.76	■■■□□ 2.19
DDR1-255	ENST00000504927	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.76	■■■□□ 2.19
DDR1-255	ENST00000504927	RGS12	O14924	1447 aa		28.76	■■■□□ 2.19
DDR1-255	ENST00000504927		A0A1W2PP64	1363 aa		28.75	■■■□□ 2.19
DDR1-255	ENST00000504927	RBM6	P78332	1123 aa	Known RBP	28.75	■■■□□ 2.19
DDR1-255	ENST00000504927	PRDM11	Q9NQV5	511 aa		28.75	■■■□□ 2.19
DDR1-255	ENST00000504927	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.74	■■■□□ 2.19
DDR1-255	ENST00000504927	EDC4	Q6P2E9	1401 aa	Known RBP	28.74	■■■□□ 2.19
DDR1-255	ENST00000504927	ZC3H6	P61129	1189 aa	Known RBP	28.73	■■■□□ 2.19
DDR1-255	ENST00000504927	ANKRD36B	Q8N2N9	1353 aa		28.73	■■■□□ 2.19
DDR1-255	ENST00000504927	KCNH5	Q8NCM2	988 aa		28.72	■■■□□ 2.19
DDR1-255	ENST00000504927	NWD2	Q9ULI1	1742 aa		28.72	■■■□□ 2.19
DDR1-255	ENST00000504927	KIAA0232	Q92628	1395 aa		28.71	■■■□□ 2.19
DDR1-255	ENST00000504927	BTG4	Q9NY30	223 aa		28.7	■■■□□ 2.18
DDR1-255	ENST00000504927	NRK	Q7Z2Y5	1582 aa		28.7	■■■□□ 2.18
DDR1-255	ENST00000504927	NRAP	Q86VF7	1730 aa		28.69	■■■□□ 2.18
DDR1-255	ENST00000504927	CPD	O75976	1380 aa		28.69	■■■□□ 2.18
DDR1-255	ENST00000504927	USP31	Q70CQ4	1352 aa		28.69	■■■□□ 2.18
DDR1-255	ENST00000504927	MON2	Q7Z3U7	1717 aa		28.69	■■■□□ 2.18
DDR1-255	ENST00000504927	COL14A1	Q05707	1796 aa	Known RBP	28.68	■■■□□ 2.18
DDR1-255	ENST00000504927	PIK3C2A	O00443	1686 aa		28.68	■■■□□ 2.18
DDR1-255	ENST00000504927	GLI3	P10071	1580 aa		28.68	■■■□□ 2.18
DDR1-255	ENST00000504927	GJD4	Q96KN9	370 aa	Predicted RBP	28.67	■■■□□ 2.18
DDR1-255	ENST00000504927	VPS72	Q15906	364 aa		28.66	■■■□□ 2.18
DDR1-255	ENST00000504927	NME9	Q86XW9	330 aa		28.66	■■■□□ 2.18
DDR1-255	ENST00000504927	POLR3GL	Q9BT43	218 aa		28.65	■■■□□ 2.18
DDR1-255	ENST00000504927	CHRNA2	Q15822	529 aa		28.64	■■■□□ 2.18
DDR1-255	ENST00000504927	SLIT3	O75094	1523 aa		28.64	■■■□□ 2.17
DDR1-255	ENST00000504927	ZRANB1	Q9UGI0	708 aa		28.62	■■■□□ 2.17
DDR1-255	ENST00000504927	EVA1C	P58658	441 aa		28.59	■■■□□ 2.17
DDR1-255	ENST00000504927	ARHGEF25	Q86VW2	580 aa		28.59	■■■□□ 2.17
DDR1-255	ENST00000504927	CCDC9	Q9Y3X0	531 aa	Known RBP	28.59	■■■□□ 2.17
DDR1-255	ENST00000504927	C11orf95	C9JLR9	678 aa	Predicted RBP	28.58	■■■□□ 2.17
DDR1-255	ENST00000504927	COG3	Q96JB2	828 aa		28.58	■■■□□ 2.17
DDR1-255	ENST00000504927	AATK	Q6ZMQ8	1374 aa		28.58	■■■□□ 2.17
DDR1-255	ENST00000504927	CARD14	Q9BXL6	1004 aa		28.57	■■■□□ 2.16
DDR1-255	ENST00000504927	EP400	Q96L91	3159 aa		28.56	■■■□□ 2.16
DDR1-255	ENST00000504927	FYB1	O15117	783 aa		28.56	■■■□□ 2.16
DDR1-255	ENST00000504927	SOX12	O15370	315 aa		28.56	■■■□□ 2.16
DDR1-255	ENST00000504927	ZBTB7C	A1YPR0	619 aa		28.55	■■■□□ 2.16
DDR1-255	ENST00000504927	LMO7	Q8WWI1	1683 aa		28.54	■■■□□ 2.16
DDR1-255	ENST00000504927	STRN4	Q9NRL3	753 aa		28.54	■■■□□ 2.16
DDR1-255	ENST00000504927	ONECUT3	O60422	494 aa	Predicted RBP	28.53	■■■□□ 2.16
DDR1-255	ENST00000504927	OVOS2	A0A0J9YW53	1432 aa		28.52	■■■□□ 2.16
DDR1-255	ENST00000504927	OVOS2	Q6IE36	1432 aa		28.52	■■■□□ 2.16
DDR1-255	ENST00000504927	SPATA31A5	Q5VU36	1347 aa		28.52	■■■□□ 2.16
DDR1-255	ENST00000504927	SPATA31A7	Q8IWB4	1347 aa		28.52	■■■□□ 2.16
DDR1-255	ENST00000504927	USP54	Q70EL1	1684 aa		28.51	■■■□□ 2.16
DDR1-255	ENST00000504927	CAMTA1	Q9Y6Y1	1673 aa		28.51	■■■□□ 2.16
DDR1-255	ENST00000504927	PANK3	Q9H999	370 aa		28.51	■■■□□ 2.15
DDR1-255	ENST00000504927	MYOM1	P52179	1685 aa		28.51	■■■□□ 2.15
DDR1-255	ENST00000504927	KIF7	Q2M1P5	1343 aa		28.5	■■■□□ 2.15
DDR1-255	ENST00000504927	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.5	■■■□□ 2.15
DDR1-255	ENST00000504927	NFAT5	O94916	1531 aa		28.49	■■■□□ 2.15
DDR1-255	ENST00000504927	BRWD3	Q6RI45	1802 aa		28.49	■■■□□ 2.15
DDR1-255	ENST00000504927	GGNBP2	Q9H3C7	697 aa		28.49	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms