RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 C14orf37Q86TY3 774 aa12.39□□□□□ -0.43
CSF1R-203ENST00000504875 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
CSF1R-203ENST00000504875 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
CSF1R-203ENST00000504875 RRS1Q15050 365 aaKnown RBP12.39□□□□□ -0.43
CSF1R-203ENST00000504875 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
CSF1R-203ENST00000504875 PUS7Q96PZ0 661 aaKnown RBP12.38□□□□□ -0.43
CSF1R-203ENST00000504875 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
CSF1R-203ENST00000504875 RLBP1P12271 317 aa12.38□□□□□ -0.43
CSF1R-203ENST00000504875 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
CSF1R-203ENST00000504875 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
CSF1R-203ENST00000504875 SETBP1Q9Y6X0 1596 aa12.37□□□□□ -0.43
CSF1R-203ENST00000504875 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
CSF1R-203ENST00000504875 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
CSF1R-203ENST00000504875 NUDT16Q96DE0 195 aaKnown RBP12.37□□□□□ -0.43
CSF1R-203ENST00000504875 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
CSF1R-203ENST00000504875 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
CSF1R-203ENST00000504875 ADGRB1O14514 1584 aa12.37□□□□□ -0.43
CSF1R-203ENST00000504875 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
CSF1R-203ENST00000504875 PPLO60437 1756 aa12.36□□□□□ -0.43
CSF1R-203ENST00000504875 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
CSF1R-203ENST00000504875 WASLO00401 505 aaPredicted RBP12.36□□□□□ -0.43
CSF1R-203ENST00000504875 ARHGAP31Q2M1Z3 1444 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 NINLQ9Y2I6 1382 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
CSF1R-203ENST00000504875 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 TULP4Q9NRJ4 1543 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 EID1Q9Y6B2 187 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 ABCC11Q96J66 1382 aa12.35□□□□□ -0.43
CSF1R-203ENST00000504875 PDZRN3Q9UPQ7 1066 aa12.34□□□□□ -0.43
CSF1R-203ENST00000504875 NEURL4Q96JN8 1562 aa12.34□□□□□ -0.43
CSF1R-203ENST00000504875 PCDHB15Q9Y5E8 787 aa12.34□□□□□ -0.43
CSF1R-203ENST00000504875 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
CSF1R-203ENST00000504875 MVPQ14764 893 aaKnown RBP12.33□□□□□ -0.44
CSF1R-203ENST00000504875 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
CSF1R-203ENST00000504875 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
CSF1R-203ENST00000504875 POLKQ9UBT6 870 aa12.33□□□□□ -0.44
CSF1R-203ENST00000504875 FCHSD2O94868 740 aa12.33□□□□□ -0.44
CSF1R-203ENST00000504875 NGDNQ8NEJ9 315 aaKnown RBP12.33□□□□□ -0.44
CSF1R-203ENST00000504875 DDX19BQ9UMR2 479 aa12.32□□□□□ -0.44
CSF1R-203ENST00000504875 IFT172Q9UG01 1749 aa12.32□□□□□ -0.44
CSF1R-203ENST00000504875 ZMYM3Q14202 1370 aa12.32□□□□□ -0.44
CSF1R-203ENST00000504875 PIK3C2BO00750 1634 aa12.32□□□□□ -0.44
CSF1R-203ENST00000504875 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
CSF1R-203ENST00000504875 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
CSF1R-203ENST00000504875 SPRYD3Q8NCJ5 442 aa12.32□□□□□ -0.44
CSF1R-203ENST00000504875 SIGLEC1Q9BZZ2 1709 aa12.31□□□□□ -0.44
CSF1R-203ENST00000504875 BECN1Q14457 450 aa12.31□□□□□ -0.44
CSF1R-203ENST00000504875 C8orf34Q49A92 452 aa12.31□□□□□ -0.44
CSF1R-203ENST00000504875 TRIM27P14373 513 aa12.31□□□□□ -0.44
CSF1R-203ENST00000504875 SLKQ9H2G2 1235 aaPredicted RBP12.31□□□□□ -0.44
CSF1R-203ENST00000504875 TRIM35Q9UPQ4 493 aa12.31□□□□□ -0.44
CSF1R-203ENST00000504875 DCTN1Q14203 1278 aa12.31□□□□□ -0.44
CSF1R-203ENST00000504875 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
CSF1R-203ENST00000504875 MFAP1P55081 439 aaKnown RBP12.3□□□□□ -0.44
CSF1R-203ENST00000504875 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
CSF1R-203ENST00000504875 PHACTR3Q96KR7 559 aa12.3□□□□□ -0.44
CSF1R-203ENST00000504875 ARXQ96QS3 562 aa12.3□□□□□ -0.44
CSF1R-203ENST00000504875 PODXL2Q9NZ53 605 aa12.3□□□□□ -0.44
CSF1R-203ENST00000504875 KIF16BQ96L93 1317 aa12.29□□□□□ -0.44
CSF1R-203ENST00000504875 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
CSF1R-203ENST00000504875 TNRQ92752 1358 aa12.29□□□□□ -0.44
CSF1R-203ENST00000504875 NFE2L2Q16236 605 aa12.29□□□□□ -0.44
CSF1R-203ENST00000504875 NUTM2GQ5VZR2 741 aa12.29□□□□□ -0.44
CSF1R-203ENST00000504875 SULT6B1Q6IMI4 303 aa12.29□□□□□ -0.44
CSF1R-203ENST00000504875 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
CSF1R-203ENST00000504875 METP08581 1390 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 GNAI1P63096 354 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
CSF1R-203ENST00000504875 PLEKHF1Q96S99 279 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 LNPKQ9C0E8 428 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 RICTORQ6R327 1708 aa12.28□□□□□ -0.44
CSF1R-203ENST00000504875 APBB1O00213 710 aa12.27□□□□□ -0.44
CSF1R-203ENST00000504875 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.44
CSF1R-203ENST00000504875 AMPHP49418 695 aa12.27□□□□□ -0.44
CSF1R-203ENST00000504875 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.44
CSF1R-203ENST00000504875 ZC3H13Q5T200 1668 aaKnown RBP12.27□□□□□ -0.44
CSF1R-203ENST00000504875 ALKQ9UM73 1620 aa12.27□□□□□ -0.45
CSF1R-203ENST00000504875 ARHGEF28Q8N1W1 1705 aaKnown RBP12.27□□□□□ -0.45
CSF1R-203ENST00000504875 PTPRMP28827 1452 aa12.27□□□□□ -0.45
CSF1R-203ENST00000504875 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
CSF1R-203ENST00000504875 PREX1Q8TCU6 1659 aa12.26□□□□□ -0.45
CSF1R-203ENST00000504875 AAMPQ13685 434 aa12.26□□□□□ -0.45
CSF1R-203ENST00000504875 GSE1Q14687 1217 aa12.26□□□□□ -0.45
CSF1R-203ENST00000504875 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
CSF1R-203ENST00000504875 TWISTNBQ3B726 338 aaPredicted RBP12.26□□□□□ -0.45
CSF1R-203ENST00000504875 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
CSF1R-203ENST00000504875 ANKRD45Q5TZF3 282 aa12.25□□□□□ -0.45
CSF1R-203ENST00000504875 A2ML1A8K2U0 1454 aa12.25□□□□□ -0.45
CSF1R-203ENST00000504875 RIMBP3CA6NJZ7 1639 aa12.25□□□□□ -0.45
CSF1R-203ENST00000504875 RIMBP3BA6NNM3 1639 aa12.25□□□□□ -0.45
CSF1R-203ENST00000504875 RIMBP3Q9UFD9 1639 aa12.25□□□□□ -0.45
CSF1R-203ENST00000504875 SEC24BO95487 1268 aa12.25□□□□□ -0.45
CSF1R-203ENST00000504875 LMOD2Q6P5Q4 547 aa12.25□□□□□ -0.45
CSF1R-203ENST00000504875 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
CSF1R-203ENST00000504875 ACEP12821 1306 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms