RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 AKAP12Q02952 1782 aa25.16■■□□□ 1.62
DDR1-254ENST00000504679 ANKRD36BQ8N2N9 1353 aa25.15■■□□□ 1.62
DDR1-254ENST00000504679 CD163L1Q9NR16 1453 aa25.15■■□□□ 1.62
DDR1-254ENST00000504679 TRPM3Q9HCF6 1732 aaPredicted RBP25.15■■□□□ 1.62
DDR1-254ENST00000504679 TTC21BQ7Z4L5 1316 aa25.14■■□□□ 1.62
DDR1-254ENST00000504679 A0A1W2PP64 1363 aa25.14■■□□□ 1.61
DDR1-254ENST00000504679 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
DDR1-254ENST00000504679 NUTM2BA6NNL0 878 aaPredicted RBP25.13■■□□□ 1.61
DDR1-254ENST00000504679 NUTM2EB1AL46 878 aaPredicted RBP25.13■■□□□ 1.61
DDR1-254ENST00000504679 NUTM2AQ8IVF1 878 aaPredicted RBP25.13■■□□□ 1.61
DDR1-254ENST00000504679 TTC21AQ8NDW8 1320 aa25.12■■□□□ 1.61
DDR1-254ENST00000504679 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
DDR1-254ENST00000504679 NLRP13Q86W25 1043 aa25.11■■□□□ 1.61
DDR1-254ENST00000504679 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.11■■□□□ 1.61
DDR1-254ENST00000504679 CCDC7Q96M83 1385 aa25.1■■□□□ 1.61
DDR1-254ENST00000504679 PLEKHG5O94827 1062 aa25.1■■□□□ 1.61
DDR1-254ENST00000504679 HAP1P54257 671 aaPredicted RBP25.1■■□□□ 1.61
DDR1-254ENST00000504679 WASHC2AQ641Q2 1341 aa25.1■■□□□ 1.61
DDR1-254ENST00000504679 NLRP6P59044 892 aa25.09■■□□□ 1.61
DDR1-254ENST00000504679 NUTM2GQ5VZR2 741 aa25.09■■□□□ 1.61
DDR1-254ENST00000504679 PANK3Q9H999 370 aa25.09■■□□□ 1.61
DDR1-254ENST00000504679 EDC4Q6P2E9 1401 aaKnown RBP25.09■■□□□ 1.61
DDR1-254ENST00000504679 ALS2Q96Q42 1657 aa25.08■■□□□ 1.61
DDR1-254ENST00000504679 MON2Q7Z3U7 1717 aa25.08■■□□□ 1.61
DDR1-254ENST00000504679 CABLES1Q8TDN4 633 aa25.07■■□□□ 1.6
DDR1-254ENST00000504679 COL22A1Q8NFW1 1626 aaPredicted RBP25.07■■□□□ 1.6
DDR1-254ENST00000504679 MYOM1P52179 1685 aa25.07■■□□□ 1.6
DDR1-254ENST00000504679 CARD14Q9BXL6 1004 aa25.06■■□□□ 1.6
DDR1-254ENST00000504679 MEX3CQ5U5Q3 659 aaKnown RBP25.05■■□□□ 1.6
DDR1-254ENST00000504679 ADAMTS2O95450 1211 aa25.03■■□□□ 1.6
DDR1-254ENST00000504679 NME9Q86XW9 330 aa25.03■■□□□ 1.6
DDR1-254ENST00000504679 NRKQ7Z2Y5 1582 aa25.01■■□□□ 1.59
DDR1-254ENST00000504679 FYB1O15117 783 aa24.99■■□□□ 1.59
DDR1-254ENST00000504679 ZRANB1Q9UGI0 708 aa24.99■■□□□ 1.59
DDR1-254ENST00000504679 NSD3Q9BZ95 1437 aa24.98■■□□□ 1.59
DDR1-254ENST00000504679 USP31Q70CQ4 1352 aa24.98■■□□□ 1.59
DDR1-254ENST00000504679 CGNL1Q0VF96 1302 aa24.98■■□□□ 1.59
DDR1-254ENST00000504679 GCP02774 474 aa24.98■■□□□ 1.59
DDR1-254ENST00000504679 COG3Q96JB2 828 aa24.98■■□□□ 1.59
DDR1-254ENST00000504679 KNSTRNQ9Y448 316 aa24.98■■□□□ 1.59
DDR1-254ENST00000504679 MED1Q15648 1581 aaPredicted RBP24.97■■□□□ 1.59
DDR1-254ENST00000504679 USP19O94966 1318 aa24.97■■□□□ 1.59
DDR1-254ENST00000504679 KCNH5Q8NCM2 988 aa24.97■■□□□ 1.59
DDR1-254ENST00000504679 PIK3C2AO00443 1686 aa24.97■■□□□ 1.59
DDR1-254ENST00000504679 NGLY1Q96IV0 654 aa24.96■■□□□ 1.59
DDR1-254ENST00000504679 LRP6O75581 1613 aa24.96■■□□□ 1.59
DDR1-254ENST00000504679 C8orf37Q96NL8 207 aa24.95■■□□□ 1.58
DDR1-254ENST00000504679 GGNBP2Q9H3C7 697 aa24.95■■□□□ 1.58
DDR1-254ENST00000504679 ZC3H6P61129 1189 aaKnown RBP24.94■■□□□ 1.58
DDR1-254ENST00000504679 ZNF316A6NFI3 1004 aaPredicted RBP24.93■■□□□ 1.58
DDR1-254ENST00000504679 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
DDR1-254ENST00000504679 FAM83GA6ND36 823 aa24.91■■□□□ 1.58
DDR1-254ENST00000504679 SOX12O15370 315 aa24.91■■□□□ 1.58
DDR1-254ENST00000504679 PER1O15534 1290 aaPredicted RBP24.91■■□□□ 1.58
DDR1-254ENST00000504679 PRDM11Q9NQV5 511 aa24.9■■□□□ 1.58
DDR1-254ENST00000504679 ABCA3Q99758 1704 aa24.89■■□□□ 1.58
DDR1-254ENST00000504679 CRYBG1Q9Y4K1 1723 aa24.89■■□□□ 1.58
DDR1-254ENST00000504679 MARF1Q9Y4F3 1742 aaKnown RBP24.89■■□□□ 1.57
DDR1-254ENST00000504679 SLIT3O75094 1523 aa24.88■■□□□ 1.57
DDR1-254ENST00000504679 PHRF1Q9P1Y6 1649 aaKnown RBP24.88■■□□□ 1.57
DDR1-254ENST00000504679 FNBP4Q8N3X1 1017 aaPredicted RBP24.87■■□□□ 1.57
DDR1-254ENST00000504679 KIAA0232Q92628 1395 aa24.87■■□□□ 1.57
DDR1-254ENST00000504679 AFF2P51816 1311 aa24.86■■□□□ 1.57
DDR1-254ENST00000504679 OVOS2A0A0J9YW53 1432 aa24.86■■□□□ 1.57
DDR1-254ENST00000504679 OVOS2Q6IE36 1432 aa24.86■■□□□ 1.57
DDR1-254ENST00000504679 KIF20BQ96Q89 1820 aa24.86■■□□□ 1.57
DDR1-254ENST00000504679 ZBTB7CA1YPR0 619 aa24.86■■□□□ 1.57
DDR1-254ENST00000504679 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
DDR1-254ENST00000504679 USP54Q70EL1 1684 aa24.85■■□□□ 1.57
DDR1-254ENST00000504679 CPDO75976 1380 aa24.85■■□□□ 1.57
DDR1-254ENST00000504679 ZNF772Q68DY9 489 aaPredicted RBP24.85■■□□□ 1.57
DDR1-254ENST00000504679 ARHGEF25Q86VW2 580 aa24.85■■□□□ 1.57
DDR1-254ENST00000504679 NSD2O96028 1365 aa24.84■■□□□ 1.57
DDR1-254ENST00000504679 CHRNA2Q15822 529 aa24.84■■□□□ 1.57
DDR1-254ENST00000504679 AMER1Q5JTC6 1135 aaPredicted RBP24.84■■□□□ 1.57
DDR1-254ENST00000504679 USP21Q9UK80 565 aa24.84■■□□□ 1.57
DDR1-254ENST00000504679 MORC1Q86VD1 984 aa24.82■■□□□ 1.56
DDR1-254ENST00000504679 BTG4Q9NY30 223 aa24.82■■□□□ 1.56
DDR1-254ENST00000504679 UNC5CLQ8IV45 518 aa24.8■■□□□ 1.56
DDR1-254ENST00000504679 COL14A1Q05707 1796 aaKnown RBP24.8■■□□□ 1.56
DDR1-254ENST00000504679 FBLN1P23142 703 aa24.79■■□□□ 1.56
DDR1-254ENST00000504679 EVA1CP58658 441 aa24.79■■□□□ 1.56
DDR1-254ENST00000504679 CC2D1BQ5T0F9 858 aaKnown RBP24.79■■□□□ 1.56
DDR1-254ENST00000504679 RGS17Q9UGC6 210 aaPredicted RBP24.79■■□□□ 1.56
DDR1-254ENST00000504679 AATKQ6ZMQ8 1374 aa24.79■■□□□ 1.56
DDR1-254ENST00000504679 NFAT5O94916 1531 aa24.78■■□□□ 1.56
DDR1-254ENST00000504679 QTRT2Q9H974 415 aaKnown RBP24.78■■□□□ 1.56
DDR1-254ENST00000504679 SLIT2O94813 1529 aa24.77■■□□□ 1.56
DDR1-254ENST00000504679 TNNT2P45379 298 aaPredicted RBP24.77■■□□□ 1.56
DDR1-254ENST00000504679 NPC1L1Q9UHC9 1359 aa24.77■■□□□ 1.56
DDR1-254ENST00000504679 AMPHP49418 695 aa24.76■■□□□ 1.55
DDR1-254ENST00000504679 CNGB1Q14028 1251 aaPredicted RBP24.76■■□□□ 1.55
DDR1-254ENST00000504679 TRPC5Q9UL62 973 aaPredicted RBP24.76■■□□□ 1.55
DDR1-254ENST00000504679 BCL9LQ86UU0 1499 aa24.75■■□□□ 1.55
DDR1-254ENST00000504679 ANKRD26Q9UPS8 1709 aa24.75■■□□□ 1.55
DDR1-254ENST00000504679 RRS1Q15050 365 aaKnown RBP24.74■■□□□ 1.55
DDR1-254ENST00000504679 IP6K1Q92551 441 aa24.74■■□□□ 1.55
DDR1-254ENST00000504679 AXIN2Q9Y2T1 843 aa24.74■■□□□ 1.55
DDR1-254ENST00000504679 MAP3K19Q56UN5 1328 aa24.74■■□□□ 1.55
DDR1-254ENST00000504679 NWD2Q9ULI1 1742 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms