RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 DDX17Q92841 729 aaKnown RBP18.89■□□□□ 0.61
CYSTM1-202ENST00000504227 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
CYSTM1-202ENST00000504227 NPC1L1Q9UHC9 1359 aa18.88■□□□□ 0.61
CYSTM1-202ENST00000504227 FYB1O15117 783 aa18.87■□□□□ 0.61
CYSTM1-202ENST00000504227 ANP32CO43423 234 aa18.87■□□□□ 0.61
CYSTM1-202ENST00000504227 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
CYSTM1-202ENST00000504227 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
CYSTM1-202ENST00000504227 MON2Q7Z3U7 1717 aa18.86■□□□□ 0.61
CYSTM1-202ENST00000504227 NME9Q86XW9 330 aa18.86■□□□□ 0.61
CYSTM1-202ENST00000504227 NSD2O96028 1365 aa18.85■□□□□ 0.61
CYSTM1-202ENST00000504227 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
CYSTM1-202ENST00000504227 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
CYSTM1-202ENST00000504227 SOS2Q07890 1332 aaPredicted RBP18.84■□□□□ 0.61
CYSTM1-202ENST00000504227 LMOD2Q6P5Q4 547 aa18.84■□□□□ 0.61
CYSTM1-202ENST00000504227 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
CYSTM1-202ENST00000504227 GGNBP2Q9H3C7 697 aa18.84■□□□□ 0.61
CYSTM1-202ENST00000504227 ROBO1Q9Y6N7 1651 aa18.83■□□□□ 0.61
CYSTM1-202ENST00000504227 COG3Q96JB2 828 aa18.83■□□□□ 0.6
CYSTM1-202ENST00000504227 NLRP6P59044 892 aa18.82■□□□□ 0.6
CYSTM1-202ENST00000504227 RALBP1Q15311 655 aa18.82■□□□□ 0.6
CYSTM1-202ENST00000504227 PXDNQ92626 1479 aa18.82■□□□□ 0.6
CYSTM1-202ENST00000504227 NLRP13Q86W25 1043 aa18.81■□□□□ 0.6
CYSTM1-202ENST00000504227 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
CYSTM1-202ENST00000504227 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
CYSTM1-202ENST00000504227 SPATA31A3Q5VYP0 1347 aa18.8■□□□□ 0.6
CYSTM1-202ENST00000504227 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
CYSTM1-202ENST00000504227 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
CYSTM1-202ENST00000504227 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
CYSTM1-202ENST00000504227 USP31Q70CQ4 1352 aa18.8■□□□□ 0.6
CYSTM1-202ENST00000504227 ARHGEF10O15013 1369 aa18.79■□□□□ 0.6
CYSTM1-202ENST00000504227 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
CYSTM1-202ENST00000504227 TNS3Q68CZ2 1445 aa18.78■□□□□ 0.6
CYSTM1-202ENST00000504227 AHDC1Q5TGY3 1603 aaPredicted RBP18.78■□□□□ 0.6
CYSTM1-202ENST00000504227 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
CYSTM1-202ENST00000504227 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
CYSTM1-202ENST00000504227 TRPM3Q9HCF6 1732 aaPredicted RBP18.76■□□□□ 0.59
CYSTM1-202ENST00000504227 KIF20BQ96Q89 1820 aa18.75■□□□□ 0.59
CYSTM1-202ENST00000504227 MIER1Q8N108 512 aa18.74■□□□□ 0.59
CYSTM1-202ENST00000504227 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
CYSTM1-202ENST00000504227 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
CYSTM1-202ENST00000504227 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
CYSTM1-202ENST00000504227 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
CYSTM1-202ENST00000504227 MYBBP1AQ9BQG0 1328 aaKnown RBP18.73■□□□□ 0.59
CYSTM1-202ENST00000504227 PIK3C2AO00443 1686 aa18.73■□□□□ 0.59
CYSTM1-202ENST00000504227 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
CYSTM1-202ENST00000504227 PPP2R1AP30153 589 aa18.72■□□□□ 0.59
CYSTM1-202ENST00000504227 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
CYSTM1-202ENST00000504227 SOX12O15370 315 aa18.71■□□□□ 0.59
CYSTM1-202ENST00000504227 USP19O94966 1318 aa18.71■□□□□ 0.59
CYSTM1-202ENST00000504227 GCP02774 474 aa18.7■□□□□ 0.58
CYSTM1-202ENST00000504227 ANKRD26Q9UPS8 1709 aa18.7■□□□□ 0.58
CYSTM1-202ENST00000504227 HSPA1LP34931 641 aa18.69■□□□□ 0.58
CYSTM1-202ENST00000504227 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
CYSTM1-202ENST00000504227 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
CYSTM1-202ENST00000504227 FBLN1P23142 703 aa18.68■□□□□ 0.58
CYSTM1-202ENST00000504227 CABLES1Q8TDN4 633 aa18.68■□□□□ 0.58
CYSTM1-202ENST00000504227 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
CYSTM1-202ENST00000504227 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
CYSTM1-202ENST00000504227 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
CYSTM1-202ENST00000504227 MTHFSP49914 203 aa18.66■□□□□ 0.58
CYSTM1-202ENST00000504227 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
CYSTM1-202ENST00000504227 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
CYSTM1-202ENST00000504227 USP54Q70EL1 1684 aa18.66■□□□□ 0.58
CYSTM1-202ENST00000504227 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
CYSTM1-202ENST00000504227 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
CYSTM1-202ENST00000504227 JCADQ9P266 1359 aa18.65■□□□□ 0.58
CYSTM1-202ENST00000504227 SLIT3O75094 1523 aa18.64■□□□□ 0.58
CYSTM1-202ENST00000504227 AMPHP49418 695 aa18.64■□□□□ 0.57
CYSTM1-202ENST00000504227 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
CYSTM1-202ENST00000504227 MED1Q15648 1581 aaPredicted RBP18.64■□□□□ 0.57
CYSTM1-202ENST00000504227 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
CYSTM1-202ENST00000504227 ZC3H6P61129 1189 aaKnown RBP18.63■□□□□ 0.57
CYSTM1-202ENST00000504227 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
CYSTM1-202ENST00000504227 MAP3K19Q56UN5 1328 aa18.63■□□□□ 0.57
CYSTM1-202ENST00000504227 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
CYSTM1-202ENST00000504227 MARF1Q9Y4F3 1742 aaKnown RBP18.62■□□□□ 0.57
CYSTM1-202ENST00000504227 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
CYSTM1-202ENST00000504227 NFAT5O94916 1531 aa18.59■□□□□ 0.57
CYSTM1-202ENST00000504227 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
CYSTM1-202ENST00000504227 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
CYSTM1-202ENST00000504227 NUTM2BA6NNL0 878 aaPredicted RBP18.59■□□□□ 0.57
CYSTM1-202ENST00000504227 NUTM2EB1AL46 878 aaPredicted RBP18.59■□□□□ 0.57
CYSTM1-202ENST00000504227 NUTM2AQ8IVF1 878 aaPredicted RBP18.59■□□□□ 0.57
CYSTM1-202ENST00000504227 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
CYSTM1-202ENST00000504227 CPDO75976 1380 aa18.58■□□□□ 0.57
CYSTM1-202ENST00000504227 IP6K1Q92551 441 aa18.58■□□□□ 0.56
CYSTM1-202ENST00000504227 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
CYSTM1-202ENST00000504227 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
CYSTM1-202ENST00000504227 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
CYSTM1-202ENST00000504227 SPATA31A6Q5VVP1 1343 aa18.57■□□□□ 0.56
CYSTM1-202ENST00000504227 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
CYSTM1-202ENST00000504227 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
CYSTM1-202ENST00000504227 INSRP06213 1382 aa18.56■□□□□ 0.56
CYSTM1-202ENST00000504227 FLT4P35916 1363 aa18.56■□□□□ 0.56
CYSTM1-202ENST00000504227 PHRF1Q9P1Y6 1649 aaKnown RBP18.56■□□□□ 0.56
CYSTM1-202ENST00000504227 HOXC9P31274 260 aa18.56■□□□□ 0.56
CYSTM1-202ENST00000504227 SHPRHQ149N8 1683 aa18.56■□□□□ 0.56
CYSTM1-202ENST00000504227 CHRNA2Q15822 529 aa18.55■□□□□ 0.56
CYSTM1-202ENST00000504227 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
CYSTM1-202ENST00000504227 NUDCQ9Y266 331 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms