RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 NEFLP07196 543 aa13.6□□□□□ -0.23
CDK7-203ENST00000504147 CDC42BPGQ6DT37 1551 aa13.6□□□□□ -0.23
CDK7-203ENST00000504147 SUPT16HQ9Y5B9 1047 aaKnown RBP13.6□□□□□ -0.23
CDK7-203ENST00000504147 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
CDK7-203ENST00000504147 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
CDK7-203ENST00000504147 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
CDK7-203ENST00000504147 COG3Q96JB2 828 aa13.58□□□□□ -0.24
CDK7-203ENST00000504147 ZRANB1Q9UGI0 708 aa13.58□□□□□ -0.24
CDK7-203ENST00000504147 FKBP8Q14318 412 aa13.57□□□□□ -0.24
CDK7-203ENST00000504147 NGDNQ8NEJ9 315 aaKnown RBP13.57□□□□□ -0.24
CDK7-203ENST00000504147 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
CDK7-203ENST00000504147 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
CDK7-203ENST00000504147 APAF1O14727 1248 aa13.56□□□□□ -0.24
CDK7-203ENST00000504147 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
CDK7-203ENST00000504147 PROSER2Q86WR7 435 aaPredicted RBP13.55□□□□□ -0.24
CDK7-203ENST00000504147 NGEFQ8N5V2 710 aa13.55□□□□□ -0.24
CDK7-203ENST00000504147 RUNDC1Q96C34 613 aa13.55□□□□□ -0.24
CDK7-203ENST00000504147 USP6P35125 1406 aa13.55□□□□□ -0.24
CDK7-203ENST00000504147 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
CDK7-203ENST00000504147 U2AF1L5P0DN76 240 aaPredicted RBP13.54□□□□□ -0.24
CDK7-203ENST00000504147 FBLN1P23142 703 aa13.54□□□□□ -0.24
CDK7-203ENST00000504147 HSPA2P54652 639 aa13.54□□□□□ -0.24
CDK7-203ENST00000504147 U2AF1Q01081 240 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDK7-203ENST00000504147 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
CDK7-203ENST00000504147 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
CDK7-203ENST00000504147 PNPLA6Q8IY17 1366 aa13.54□□□□□ -0.24
CDK7-203ENST00000504147 NKTRP30414 1462 aaKnown RBP13.54□□□□□ -0.24
CDK7-203ENST00000504147 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
CDK7-203ENST00000504147 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
CDK7-203ENST00000504147 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
CDK7-203ENST00000504147 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
CDK7-203ENST00000504147 U2SURPO15042 1029 aaKnown RBP13.52□□□□□ -0.25
CDK7-203ENST00000504147 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.25
CDK7-203ENST00000504147 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
CDK7-203ENST00000504147 ZNF521Q96K83 1311 aa13.52□□□□□ -0.25
CDK7-203ENST00000504147 ADGRL3Q9HAR2 1447 aa13.52□□□□□ -0.25
CDK7-203ENST00000504147 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
CDK7-203ENST00000504147 C1QBPQ07021 282 aaKnown RBP13.51□□□□□ -0.25
CDK7-203ENST00000504147 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
CDK7-203ENST00000504147 EMILIN1Q9Y6C2 1016 aa13.51□□□□□ -0.25
CDK7-203ENST00000504147 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
CDK7-203ENST00000504147 TCP11L2Q8N4U5 519 aa13.5□□□□□ -0.25
CDK7-203ENST00000504147 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
CDK7-203ENST00000504147 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
CDK7-203ENST00000504147 KIF20BQ96Q89 1820 aa13.49□□□□□ -0.25
CDK7-203ENST00000504147 AKAP12Q02952 1782 aa13.49□□□□□ -0.25
CDK7-203ENST00000504147 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
CDK7-203ENST00000504147 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
CDK7-203ENST00000504147 RNF123Q5XPI4 1314 aa13.48□□□□□ -0.25
CDK7-203ENST00000504147 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
CDK7-203ENST00000504147 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
CDK7-203ENST00000504147 RRS1Q15050 365 aaKnown RBP13.48□□□□□ -0.25
CDK7-203ENST00000504147 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
CDK7-203ENST00000504147 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
CDK7-203ENST00000504147 C19orf44Q9H6X5 657 aa13.48□□□□□ -0.25
CDK7-203ENST00000504147 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 IL13P35225 146 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 IRX6P78412 446 aaPredicted RBP13.47□□□□□ -0.25
CDK7-203ENST00000504147 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 PLEKHF1Q96S99 279 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 RRP7AQ9Y3A4 280 aaKnown RBP13.47□□□□□ -0.25
CDK7-203ENST00000504147 FMN2Q9NZ56 1722 aa13.47□□□□□ -0.25
CDK7-203ENST00000504147 FCHSD2O94868 740 aa13.46□□□□□ -0.25
CDK7-203ENST00000504147 WWC1Q8IX03 1113 aa13.46□□□□□ -0.25
CDK7-203ENST00000504147 TRMT2AQ8IZ69 625 aaKnown RBP13.46□□□□□ -0.25
CDK7-203ENST00000504147 E9PSI1 815 aa13.45□□□□□ -0.26
CDK7-203ENST00000504147 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
CDK7-203ENST00000504147 NLRP6P59044 892 aa13.45□□□□□ -0.26
CDK7-203ENST00000504147 PSME1Q06323 249 aa13.45□□□□□ -0.26
CDK7-203ENST00000504147 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
CDK7-203ENST00000504147 CCDC27Q2M243 656 aa13.45□□□□□ -0.26
CDK7-203ENST00000504147 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
CDK7-203ENST00000504147 NRKQ7Z2Y5 1582 aa13.45□□□□□ -0.26
CDK7-203ENST00000504147 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
CDK7-203ENST00000504147 LMTK3Q96Q04 1460 aa13.44□□□□□ -0.26
CDK7-203ENST00000504147 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
CDK7-203ENST00000504147 WDR63Q8IWG1 891 aa13.44□□□□□ -0.26
CDK7-203ENST00000504147 ORAI2Q96SN7 254 aa13.44□□□□□ -0.26
CDK7-203ENST00000504147 NCOA3Q9Y6Q9 1424 aa13.44□□□□□ -0.26
CDK7-203ENST00000504147 TMEM94Q12767 1356 aa13.44□□□□□ -0.26
CDK7-203ENST00000504147 MAPK8IP3Q9UPT6 1336 aa13.43□□□□□ -0.26
CDK7-203ENST00000504147 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
CDK7-203ENST00000504147 ATF3P18847 181 aa13.43□□□□□ -0.26
CDK7-203ENST00000504147 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
CDK7-203ENST00000504147 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
CDK7-203ENST00000504147 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
CDK7-203ENST00000504147 SOX12O15370 315 aa13.42□□□□□ -0.26
CDK7-203ENST00000504147 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
CDK7-203ENST00000504147 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
CDK7-203ENST00000504147 RSPH6AQ9H0K4 717 aa13.42□□□□□ -0.26
CDK7-203ENST00000504147 PRKAR2BP31323 418 aa13.41□□□□□ -0.26
CDK7-203ENST00000504147 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
CDK7-203ENST00000504147 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
CDK7-203ENST00000504147 FOXO3O43524 673 aa13.4□□□□□ -0.26
CDK7-203ENST00000504147 NEFMP07197 916 aa13.4□□□□□ -0.26
CDK7-203ENST00000504147 HMOX1P09601 288 aa13.4□□□□□ -0.26
CDK7-203ENST00000504147 RRP1P56182 461 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms