RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 RPRD2Q5VT52 1461 aaKnown RBP8.54□□□□□ -1.04
SH3TC2-204ENST00000504091 DMTNQ08495 405 aa8.54□□□□□ -1.04
SH3TC2-204ENST00000504091 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
SH3TC2-204ENST00000504091 HS1BP3Q53T59 392 aa8.54□□□□□ -1.04
SH3TC2-204ENST00000504091 CPS1P31327 1500 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 MCM5P33992 734 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 SYAP1Q96A49 352 aaPredicted RBP8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 UTP14CQ5TAP6 766 aaKnown RBP8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 RNF25Q96BH1 459 aaPredicted RBP8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 ZKSCAN5Q9Y2L8 839 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 KIF3AQ9Y496 699 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 USP19O94966 1318 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 PLEKHH2Q8IVE3 1493 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 NOL7Q9UMY1 257 aaKnown RBP8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 NUCB2P80303 420 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 MKRN4PQ13434 485 aaPredicted RBP8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 ITPRIPQ8IWB1 547 aa8.53□□□□□ -1.04
SH3TC2-204ENST00000504091 PDCL2Q8N4E4 241 aa8.52□□□□□ -1.04
SH3TC2-204ENST00000504091 PPP1R9BQ96SB3 815 aa8.52□□□□□ -1.04
SH3TC2-204ENST00000504091 CFDP1Q9UEE9 299 aaPredicted RBP8.52□□□□□ -1.04
SH3TC2-204ENST00000504091 SYNMO15061 1565 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 CCDC66A2RUB6 948 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 SPATA31E1Q6ZUB1 1445 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 KLHL40Q2TBA0 621 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 TMCO4Q5TGY1 634 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 VGLL3A8MV65 326 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 TSPY4P0CV99 314 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 TSPY10P0CW01 314 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 MPNDQ8N594 471 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 DIAPH3Q9NSV4 1193 aa8.52□□□□□ -1.05
SH3TC2-204ENST00000504091 ATP10AO60312 1499 aa8.51□□□□□ -1.05
SH3TC2-204ENST00000504091 TAF7LQ5H9L4 462 aa8.51□□□□□ -1.05
SH3TC2-204ENST00000504091 PRPF40AO75400 957 aaKnown RBP8.51□□□□□ -1.05
SH3TC2-204ENST00000504091 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
SH3TC2-204ENST00000504091 MYO5CQ9NQX4 1742 aa8.51□□□□□ -1.05
SH3TC2-204ENST00000504091 SSFA2P28290 1259 aa8.51□□□□□ -1.05
SH3TC2-204ENST00000504091 RNF216Q9NWF9 866 aaPredicted RBP8.51□□□□□ -1.05
SH3TC2-204ENST00000504091 K7ELQ4 463 aaPredicted RBP8.5□□□□□ -1.05
SH3TC2-204ENST00000504091 SEMA3EO15041 775 aa8.5□□□□□ -1.05
SH3TC2-204ENST00000504091 NUP155O75694 1391 aa8.5□□□□□ -1.05
SH3TC2-204ENST00000504091 ANKRD30AQ9BXX3 1397 aa8.5□□□□□ -1.05
SH3TC2-204ENST00000504091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.5□□□□□ -1.05
SH3TC2-204ENST00000504091 ZNF500O60304 480 aaPredicted RBP8.5□□□□□ -1.05
SH3TC2-204ENST00000504091 PPP2R1AP30153 589 aa8.5□□□□□ -1.05
SH3TC2-204ENST00000504091 ATP10BO94823 1461 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 GTPBP6O43824 516 aaPredicted RBP8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 PHF14O94880 888 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 CWC22Q9HCG8 908 aaKnown RBP8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 RAB3GAP1Q15042 981 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 CASC1Q6TDU7 716 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 NGEFQ8N5V2 710 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 PRIMPOLQ96LW4 560 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 RRP7AQ9Y3A4 280 aaKnown RBP8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 NINLQ9Y2I6 1382 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 ZKSCAN2Q63HK3 967 aa8.49□□□□□ -1.05
SH3TC2-204ENST00000504091 C3P01024 1663 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 SMC4Q9NTJ3 1288 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 PARD3Q8TEW0 1356 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 BAG4O95429 457 aaKnown RBP8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 LNPKQ9C0E8 428 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 KCNJ4P48050 445 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 ZSCAN23Q3MJ62 389 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 HECW1Q76N89 1606 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 MLH3Q9UHC1 1453 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 DZIP1LQ8IYY4 767 aaKnown RBP8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 RGS22Q8NE09 1264 aa8.48□□□□□ -1.05
SH3TC2-204ENST00000504091 NKTRP30414 1462 aaKnown RBP8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 SYCE3A1L190 88 aa8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 SMC5Q8IY18 1101 aa8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 DEPDC5O75140 1603 aa8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 ST18O60284 1047 aa8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 PCDHB15Q9Y5E8 787 aa8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 DRC7Q8IY82 874 aa8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 IPO4Q8TEX9 1081 aaKnown RBP8.47□□□□□ -1.05
SH3TC2-204ENST00000504091 CARNS1A5YM72 827 aa8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 GOLGA6L6A8MZA4 724 aa8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 MEX3CQ5U5Q3 659 aaKnown RBP8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 STAC3Q96MF2 364 aa8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 TSPY26PQ9H489 355 aa8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 PLEKHH1Q9ULM0 1364 aa8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 PRIM1P49642 420 aaKnown RBP8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 MYRIPQ8NFW9 859 aa8.46□□□□□ -1.05
SH3TC2-204ENST00000504091 MBD3O95983 291 aa8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 ANKRD45Q5TZF3 282 aa8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 SNX21Q969T3 373 aa8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 CFAP53Q96M91 514 aa8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 KIF16BQ96L93 1317 aa8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 TSC1Q92574 1164 aa8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 RBSNQ9H1K0 784 aa8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 POLR1AO95602 1720 aaPredicted RBP8.46□□□□□ -1.06
SH3TC2-204ENST00000504091 DDX19BQ9UMR2 479 aa8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 ITSN2Q9NZM3 1697 aa8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 FAM177BA6PVY3 158 aa8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 IPO8O15397 1037 aaKnown RBP8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 FOXD4L6Q3SYB3 417 aaPredicted RBP8.45□□□□□ -1.06
SH3TC2-204ENST00000504091 FOXD4L3Q6VB84 417 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms