RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 CD163L1Q9NR16 1453 aa20.38■□□□□ 0.85
SGCA-204ENST00000504073 ESCO1Q5FWF5 840 aa20.38■□□□□ 0.85
SGCA-204ENST00000504073 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
SGCA-204ENST00000504073 MON2Q7Z3U7 1717 aa20.38■□□□□ 0.85
SGCA-204ENST00000504073 POLR3AO14802 1390 aaPredicted RBP20.37■□□□□ 0.85
SGCA-204ENST00000504073 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
SGCA-204ENST00000504073 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
SGCA-204ENST00000504073 TTC21AQ8NDW8 1320 aa20.36■□□□□ 0.85
SGCA-204ENST00000504073 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
SGCA-204ENST00000504073 PMFBP1Q8TBY8 1022 aa20.36■□□□□ 0.85
SGCA-204ENST00000504073 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.85
SGCA-204ENST00000504073 RGPD8O14715 1765 aaPredicted RBP20.36■□□□□ 0.85
SGCA-204ENST00000504073 USP6P35125 1406 aa20.35■□□□□ 0.85
SGCA-204ENST00000504073 KIF20BQ96Q89 1820 aa20.34■□□□□ 0.85
SGCA-204ENST00000504073 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
SGCA-204ENST00000504073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.33■□□□□ 0.85
SGCA-204ENST00000504073 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
SGCA-204ENST00000504073 PSME1Q06323 249 aa20.32■□□□□ 0.84
SGCA-204ENST00000504073 MST1RQ04912 1400 aa20.32■□□□□ 0.84
SGCA-204ENST00000504073 ANKRD26Q9UPS8 1709 aa20.31■□□□□ 0.84
SGCA-204ENST00000504073 COG3Q96JB2 828 aa20.31■□□□□ 0.84
SGCA-204ENST00000504073 TTC21BQ7Z4L5 1316 aa20.3■□□□□ 0.84
SGCA-204ENST00000504073 FYB1O15117 783 aa20.29■□□□□ 0.84
SGCA-204ENST00000504073 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
SGCA-204ENST00000504073 PPP2R1AP30153 589 aa20.27■□□□□ 0.84
SGCA-204ENST00000504073 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
SGCA-204ENST00000504073 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.83
SGCA-204ENST00000504073 NRKQ7Z2Y5 1582 aa20.26■□□□□ 0.83
SGCA-204ENST00000504073 ORAI2Q96SN7 254 aa20.26■□□□□ 0.83
SGCA-204ENST00000504073 SLAIN2Q9P270 581 aa20.26■□□□□ 0.83
SGCA-204ENST00000504073 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
SGCA-204ENST00000504073 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
SGCA-204ENST00000504073 SSH2Q76I76 1423 aa20.24■□□□□ 0.83
SGCA-204ENST00000504073 JCADQ9P266 1359 aa20.23■□□□□ 0.83
SGCA-204ENST00000504073 FOXO3O43524 673 aa20.23■□□□□ 0.83
SGCA-204ENST00000504073 NME9Q86XW9 330 aa20.23■□□□□ 0.83
SGCA-204ENST00000504073 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
SGCA-204ENST00000504073 ABTB2Q8N961 1025 aa20.22■□□□□ 0.83
SGCA-204ENST00000504073 LRP6O75581 1613 aa20.21■□□□□ 0.83
SGCA-204ENST00000504073 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
SGCA-204ENST00000504073 USP31Q70CQ4 1352 aa20.21■□□□□ 0.83
SGCA-204ENST00000504073 NLRP6P59044 892 aa20.19■□□□□ 0.82
SGCA-204ENST00000504073 AATKQ6ZMQ8 1374 aa20.19■□□□□ 0.82
SGCA-204ENST00000504073 WDR43Q15061 677 aaKnown RBP eCLIP20.18■□□□□ 0.82
SGCA-204ENST00000504073 SBNO1A3KN83 1393 aa20.18■□□□□ 0.82
SGCA-204ENST00000504073 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
SGCA-204ENST00000504073 OVOS2A0A0J9YW53 1432 aa20.17■□□□□ 0.82
SGCA-204ENST00000504073 OVOS2Q6IE36 1432 aa20.17■□□□□ 0.82
SGCA-204ENST00000504073 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
SGCA-204ENST00000504073 MEX3CQ5U5Q3 659 aaKnown RBP20.16■□□□□ 0.82
SGCA-204ENST00000504073 ZNF772Q68DY9 489 aaPredicted RBP20.16■□□□□ 0.82
SGCA-204ENST00000504073 KCNH5Q8NCM2 988 aa20.16■□□□□ 0.82
SGCA-204ENST00000504073 MTHFSP49914 203 aa20.15■□□□□ 0.82
SGCA-204ENST00000504073 LMOD2Q6P5Q4 547 aa20.15■□□□□ 0.82
SGCA-204ENST00000504073 FAM9BQ8IZU0 186 aa20.15■□□□□ 0.82
SGCA-204ENST00000504073 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
SGCA-204ENST00000504073 USP54Q70EL1 1684 aa20.14■□□□□ 0.81
SGCA-204ENST00000504073 ARHGEF10O15013 1369 aa20.14■□□□□ 0.81
SGCA-204ENST00000504073 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
SGCA-204ENST00000504073 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
SGCA-204ENST00000504073 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
SGCA-204ENST00000504073 RXRBP28702 533 aa20.11■□□□□ 0.81
SGCA-204ENST00000504073 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
SGCA-204ENST00000504073 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
SGCA-204ENST00000504073 TNS3Q68CZ2 1445 aa20.1■□□□□ 0.81
SGCA-204ENST00000504073 INSRP06213 1382 aa20.1■□□□□ 0.81
SGCA-204ENST00000504073 KIF24Q5T7B8 1368 aa20.1■□□□□ 0.81
SGCA-204ENST00000504073 SPATA31A6Q5VVP1 1343 aa20.1■□□□□ 0.81
SGCA-204ENST00000504073 YTHDC1Q96MU7 727 aaKnown RBP20.1■□□□□ 0.81
SGCA-204ENST00000504073 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
SGCA-204ENST00000504073 MAP2P11137 1827 aaKnown RBP20.09■□□□□ 0.81
SGCA-204ENST00000504073 PPM1GO15355 546 aaPredicted RBP20.09■□□□□ 0.81
SGCA-204ENST00000504073 SOS2Q07890 1332 aaPredicted RBP20.08■□□□□ 0.81
SGCA-204ENST00000504073 PXDNQ92626 1479 aa20.08■□□□□ 0.81
SGCA-204ENST00000504073 CDK12Q9NYV4 1490 aaPredicted RBP20.08■□□□□ 0.81
SGCA-204ENST00000504073 POLKQ9UBT6 870 aa20.08■□□□□ 0.81
SGCA-204ENST00000504073 SMG6Q86US8 1419 aaKnown RBP20.08■□□□□ 0.8
SGCA-204ENST00000504073 SPATA31A3Q5VYP0 1347 aa20.07■□□□□ 0.8
SGCA-204ENST00000504073 NHSL1Q5SYE7 1610 aa20.07■□□□□ 0.8
SGCA-204ENST00000504073 NUTM2GQ5VZR2 741 aa20.07■□□□□ 0.8
SGCA-204ENST00000504073 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
SGCA-204ENST00000504073 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
SGCA-204ENST00000504073 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
SGCA-204ENST00000504073 AMPHP49418 695 aa20.06■□□□□ 0.8
SGCA-204ENST00000504073 SOX12O15370 315 aa20.05■□□□□ 0.8
SGCA-204ENST00000504073 ALS2Q96Q42 1657 aa20.05■□□□□ 0.8
SGCA-204ENST00000504073 SHPRHQ149N8 1683 aa20.04■□□□□ 0.8
SGCA-204ENST00000504073 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
SGCA-204ENST00000504073 RTL1A6NKG5 1358 aa20.04■□□□□ 0.8
SGCA-204ENST00000504073 FLT4P35916 1363 aa20.04■□□□□ 0.8
SGCA-204ENST00000504073 USP19O94966 1318 aa20.03■□□□□ 0.8
SGCA-204ENST00000504073 NEFMP07197 916 aa20.03■□□□□ 0.8
SGCA-204ENST00000504073 RRS1Q15050 365 aaKnown RBP20.03■□□□□ 0.8
SGCA-204ENST00000504073 PNPLA6Q8IY17 1366 aa20.03■□□□□ 0.8
SGCA-204ENST00000504073 SLIT3O75094 1523 aa20.02■□□□□ 0.8
SGCA-204ENST00000504073 AHDC1Q5TGY3 1603 aaPredicted RBP20.02■□□□□ 0.8
SGCA-204ENST00000504073 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.8
SGCA-204ENST00000504073 HNRNPUQ00839 825 aaKnown RBP eCLIP20.02■□□□□ 0.8
SGCA-204ENST00000504073 DDX17Q92841 729 aaKnown RBP20.02■□□□□ 0.8
SGCA-204ENST00000504073 EMILIN1Q9Y6C2 1016 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms