RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ANKARQ7Z5J8 1434 aa29.11■■■□□ 2.25
PTPN13-205ENST00000502971 ACEP12821 1306 aa29.1■■■□□ 2.25
PTPN13-205ENST00000502971 ERICH6BQ5W0A0 696 aa29.09■■■□□ 2.25
PTPN13-205ENST00000502971 ZNF521Q96K83 1311 aa29.09■■■□□ 2.25
PTPN13-205ENST00000502971 COL3A1P02461 1466 aaPredicted RBP29.08■■■□□ 2.25
PTPN13-205ENST00000502971 NME9Q86XW9 330 aa29.08■■■□□ 2.25
PTPN13-205ENST00000502971 PNPLA6Q8IY17 1366 aa29.07■■■□□ 2.24
PTPN13-205ENST00000502971 APAF1O14727 1248 aa29.07■■■□□ 2.24
PTPN13-205ENST00000502971 RNF123Q5XPI4 1314 aa29.07■■■□□ 2.24
PTPN13-205ENST00000502971 NRKQ7Z2Y5 1582 aa29.07■■■□□ 2.24
PTPN13-205ENST00000502971 NUTM2FA1L443 756 aa29.06■■■□□ 2.24
PTPN13-205ENST00000502971 RUNDC1Q96C34 613 aa29.06■■■□□ 2.24
PTPN13-205ENST00000502971 USP6P35125 1406 aa29.06■■■□□ 2.24
PTPN13-205ENST00000502971 CDCA7LQ96GN5 454 aa29.06■■■□□ 2.24
PTPN13-205ENST00000502971 COG3Q96JB2 828 aa29.06■■■□□ 2.24
PTPN13-205ENST00000502971 FMN2Q9NZ56 1722 aa29.05■■■□□ 2.24
PTPN13-205ENST00000502971 AATKQ6ZMQ8 1374 aa29.05■■■□□ 2.24
PTPN13-205ENST00000502971 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
PTPN13-205ENST00000502971 TTC21BQ7Z4L5 1316 aa29.04■■■□□ 2.24
PTPN13-205ENST00000502971 NALCNQ8IZF0 1738 aa29.04■■■□□ 2.24
PTPN13-205ENST00000502971 PROSER2Q86WR7 435 aaPredicted RBP29.03■■■□□ 2.24
PTPN13-205ENST00000502971 POLKQ9UBT6 870 aa29.02■■■□□ 2.24
PTPN13-205ENST00000502971 GOLGA2Q08379 1002 aa29.01■■■□□ 2.23
PTPN13-205ENST00000502971 SSH2Q76I76 1423 aa29.01■■■□□ 2.23
PTPN13-205ENST00000502971 U2AF1L5P0DN76 240 aaPredicted RBP29■■■□□ 2.23
PTPN13-205ENST00000502971 U2AF1Q01081 240 aaKnown RBP eCLIP29■■■□□ 2.23
PTPN13-205ENST00000502971 ADGRL3Q9HAR2 1447 aa28.99■■■□□ 2.23
PTPN13-205ENST00000502971 DIAPH1O60610 1272 aaKnown RBP28.99■■■□□ 2.23
PTPN13-205ENST00000502971 NCBP3Q53F19 620 aaKnown RBP28.99■■■□□ 2.23
PTPN13-205ENST00000502971 STRCP1A6NGW2 1772 aa28.99■■■□□ 2.23
PTPN13-205ENST00000502971 IQSEC2Q5JU85 1478 aa28.99■■■□□ 2.23
PTPN13-205ENST00000502971 TTC21AQ8NDW8 1320 aa28.98■■■□□ 2.23
PTPN13-205ENST00000502971 ZRANB1Q9UGI0 708 aa28.98■■■□□ 2.23
PTPN13-205ENST00000502971 RGPD8O14715 1765 aaPredicted RBP28.98■■■□□ 2.23
PTPN13-205ENST00000502971 RCAN3Q9UKA8 241 aa28.97■■■□□ 2.23
PTPN13-205ENST00000502971 MAP2P11137 1827 aaKnown RBP28.96■■■□□ 2.23
PTPN13-205ENST00000502971 ZNF335Q9H4Z2 1342 aaPredicted RBP28.96■■■□□ 2.23
PTPN13-205ENST00000502971 IRX6P78412 446 aaPredicted RBP28.96■■■□□ 2.23
PTPN13-205ENST00000502971 NGDNQ8NEJ9 315 aaKnown RBP28.96■■■□□ 2.23
PTPN13-205ENST00000502971 PMFBP1Q8TBY8 1022 aa28.96■■■□□ 2.23
PTPN13-205ENST00000502971 CDK12Q9NYV4 1490 aaPredicted RBP28.94■■■□□ 2.22
PTPN13-205ENST00000502971 OVOS2A0A0J9YW53 1432 aa28.94■■■□□ 2.22
PTPN13-205ENST00000502971 OVOS2Q6IE36 1432 aa28.94■■■□□ 2.22
PTPN13-205ENST00000502971 U2SURPO15042 1029 aaKnown RBP28.94■■■□□ 2.22
PTPN13-205ENST00000502971 SLFN5Q08AF3 891 aa28.94■■■□□ 2.22
PTPN13-205ENST00000502971 TCP11L2Q8N4U5 519 aa28.94■■■□□ 2.22
PTPN13-205ENST00000502971 TMEM94Q12767 1356 aa28.94■■■□□ 2.22
PTPN13-205ENST00000502971 DUSP27Q5VZP5 1158 aa28.93■■■□□ 2.22
PTPN13-205ENST00000502971 C14orf37Q86TY3 774 aa28.93■■■□□ 2.22
PTPN13-205ENST00000502971 PNNQ9H307 717 aaKnown RBP28.93■■■□□ 2.22
PTPN13-205ENST00000502971 C19orf44Q9H6X5 657 aa28.93■■■□□ 2.22
PTPN13-205ENST00000502971 TRMT2AQ8IZ69 625 aaKnown RBP28.91■■■□□ 2.22
PTPN13-205ENST00000502971 FBLN1P23142 703 aa28.91■■■□□ 2.22
PTPN13-205ENST00000502971 CCDC27Q2M243 656 aa28.91■■■□□ 2.22
PTPN13-205ENST00000502971 E9PSI1 815 aa28.9■■■□□ 2.22
PTPN13-205ENST00000502971 WWC1Q8IX03 1113 aa28.9■■■□□ 2.22
PTPN13-205ENST00000502971 RBM33Q96EV2 1170 aaKnown RBP28.9■■■□□ 2.22
PTPN13-205ENST00000502971 PPM1GO15355 546 aaPredicted RBP28.89■■■□□ 2.22
PTPN13-205ENST00000502971 PHF23Q9BUL5 403 aaPredicted RBP28.89■■■□□ 2.22
PTPN13-205ENST00000502971 EMILIN1Q9Y6C2 1016 aa28.89■■■□□ 2.22
PTPN13-205ENST00000502971 USP31Q70CQ4 1352 aa28.89■■■□□ 2.22
PTPN13-205ENST00000502971 DCCP43146 1447 aa28.89■■■□□ 2.21
PTPN13-205ENST00000502971 PLEKHF1Q96S99 279 aa28.89■■■□□ 2.21
PTPN13-205ENST00000502971 LRRC7Q96NW7 1537 aa28.88■■■□□ 2.21
PTPN13-205ENST00000502971 PELP1Q8IZL8 1130 aaKnown RBP28.87■■■□□ 2.21
PTPN13-205ENST00000502971 RRP1P56182 461 aaKnown RBP28.86■■■□□ 2.21
PTPN13-205ENST00000502971 PPP4R2Q9NY27 417 aa28.86■■■□□ 2.21
PTPN13-205ENST00000502971 FCHSD2O94868 740 aa28.85■■■□□ 2.21
PTPN13-205ENST00000502971 WDR63Q8IWG1 891 aa28.84■■■□□ 2.21
PTPN13-205ENST00000502971 PHF8Q9UPP1 1060 aa28.84■■■□□ 2.21
PTPN13-205ENST00000502971 MSH6P52701 1360 aa28.83■■■□□ 2.21
PTPN13-205ENST00000502971 IL13P35225 146 aa28.83■■■□□ 2.21
PTPN13-205ENST00000502971 MAPK8IP3Q9UPT6 1336 aa28.83■■■□□ 2.21
PTPN13-205ENST00000502971 RRS1Q15050 365 aaKnown RBP28.83■■■□□ 2.21
PTPN13-205ENST00000502971 RRP7AQ9Y3A4 280 aaKnown RBP28.83■■■□□ 2.21
PTPN13-205ENST00000502971 NEUROD2Q15784 382 aa28.82■■■□□ 2.2
PTPN13-205ENST00000502971 CADPS2Q86UW7 1296 aa28.81■■■□□ 2.2
PTPN13-205ENST00000502971 SPINK5Q9NQ38 1064 aaPredicted RBP28.81■■■□□ 2.2
PTPN13-205ENST00000502971 ATF3P18847 181 aa28.8■■■□□ 2.2
PTPN13-205ENST00000502971 PIK3C2AO00443 1686 aa28.8■■■□□ 2.2
PTPN13-205ENST00000502971 USP54Q70EL1 1684 aa28.78■■■□□ 2.2
PTPN13-205ENST00000502971 XIRP1Q702N8 1843 aaKnown RBP28.78■■■□□ 2.2
PTPN13-205ENST00000502971 TMPOP42166 694 aaKnown RBP28.77■■■□□ 2.2
PTPN13-205ENST00000502971 RSPH6AQ9H0K4 717 aa28.77■■■□□ 2.2
PTPN13-205ENST00000502971 LTBP4Q8N2S1 1624 aa28.75■■■□□ 2.19
PTPN13-205ENST00000502971 NEFMP07197 916 aa28.75■■■□□ 2.19
PTPN13-205ENST00000502971 ESCO1Q5FWF5 840 aa28.74■■■□□ 2.19
PTPN13-205ENST00000502971 PRKAR2BP31323 418 aa28.72■■■□□ 2.19
PTPN13-205ENST00000502971 NLRP6P59044 892 aa28.72■■■□□ 2.19
PTPN13-205ENST00000502971 C1orf167Q5SNV9 1468 aa28.71■■■□□ 2.19
PTPN13-205ENST00000502971 PEAK1Q9H792 1746 aa28.7■■■□□ 2.19
PTPN13-205ENST00000502971 MST1RQ04912 1400 aa28.7■■■□□ 2.19
PTPN13-205ENST00000502971 ABTB2Q8N961 1025 aa28.7■■■□□ 2.19
PTPN13-205ENST00000502971 KIF1AQ12756 1690 aa28.69■■■□□ 2.18
PTPN13-205ENST00000502971 SBNO1A3KN83 1393 aa28.69■■■□□ 2.18
PTPN13-205ENST00000502971 MYH16Q9H6N6 1097 aa28.69■■■□□ 2.18
PTPN13-205ENST00000502971 TRIM35Q9UPQ4 493 aa28.69■■■□□ 2.18
PTPN13-205ENST00000502971 PAK3O75914 559 aaPredicted RBP28.68■■■□□ 2.18
PTPN13-205ENST00000502971 HMOX1P09601 288 aa28.68■■■□□ 2.18
PTPN13-205ENST00000502971 RIPK4P57078 832 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms