RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 COG3Q96JB2 828 aa20.77■□□□□ 0.92
HMGXB3-201ENST00000502717 IGHDP01880 384 aa20.76■□□□□ 0.91
HMGXB3-201ENST00000502717 ATF3P18847 181 aa20.76■□□□□ 0.91
HMGXB3-201ENST00000502717 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
HMGXB3-201ENST00000502717 MCM5P33992 734 aa20.75■□□□□ 0.91
HMGXB3-201ENST00000502717 HOMER1Q86YM7 354 aa20.75■□□□□ 0.91
HMGXB3-201ENST00000502717 PTPRKQ15262 1439 aa20.75■□□□□ 0.91
HMGXB3-201ENST00000502717 ERC2O15083 957 aa20.74■□□□□ 0.91
HMGXB3-201ENST00000502717 GTF2E1P29083 439 aaPredicted RBP20.74■□□□□ 0.91
HMGXB3-201ENST00000502717 TPD52L1Q16890 204 aaPredicted RBP20.74■□□□□ 0.91
HMGXB3-201ENST00000502717 GGNBP2Q9H3C7 697 aa20.74■□□□□ 0.91
HMGXB3-201ENST00000502717 WDR33Q9C0J8 1336 aaKnown RBP20.74■□□□□ 0.91
HMGXB3-201ENST00000502717 G3V3G9 751 aa20.74■□□□□ 0.91
HMGXB3-201ENST00000502717 DCAF8Q5TAQ9 597 aa20.74■□□□□ 0.91
HMGXB3-201ENST00000502717 ZNF428Q96B54 188 aa20.73■□□□□ 0.91
HMGXB3-201ENST00000502717 C1orf115Q9H7X2 142 aa20.73■□□□□ 0.91
HMGXB3-201ENST00000502717 RNF20Q5VTR2 975 aa20.73■□□□□ 0.91
HMGXB3-201ENST00000502717 TRIM5Q9C035 493 aa20.73■□□□□ 0.91
HMGXB3-201ENST00000502717 TMEM132EQ6IEE7 984 aa20.72■□□□□ 0.91
HMGXB3-201ENST00000502717 CCAR2Q8N163 923 aaKnown RBP20.71■□□□□ 0.91
HMGXB3-201ENST00000502717 PANK2Q9BZ23 570 aa20.71■□□□□ 0.91
HMGXB3-201ENST00000502717 SYCE3A1L190 88 aa20.7■□□□□ 0.9
HMGXB3-201ENST00000502717 XPCQ01831 940 aaPredicted RBP20.7■□□□□ 0.9
HMGXB3-201ENST00000502717 MNS1Q8NEH6 495 aa20.7■□□□□ 0.9
HMGXB3-201ENST00000502717 KLHL40Q2TBA0 621 aa20.69■□□□□ 0.9
HMGXB3-201ENST00000502717 CCDC192P0DO97 292 aa20.69■□□□□ 0.9
HMGXB3-201ENST00000502717 UGGT2Q9NYU1 1516 aa20.69■□□□□ 0.9
HMGXB3-201ENST00000502717 SSFA2P28290 1259 aa20.69■□□□□ 0.9
HMGXB3-201ENST00000502717 HSP90AB4PQ58FF6 505 aa20.69■□□□□ 0.9
HMGXB3-201ENST00000502717 TAF3Q5VWG9 929 aa20.69■□□□□ 0.9
HMGXB3-201ENST00000502717 TMEM57Q8N5G2 664 aa20.69■□□□□ 0.9
HMGXB3-201ENST00000502717 DYNC1I1O14576 645 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 HMOX1P09601 288 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 TWISTNBQ3B726 338 aaPredicted RBP20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 CCDC73Q6ZRK6 1079 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 DHX29Q7Z478 1369 aaKnown RBP20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 CTTNBP2Q8WZ74 1663 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 GPRASP1Q5JY77 1395 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 PARD3Q8TEW0 1356 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 PDCL2Q8N4E4 241 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 SLC12A5Q9H2X9 1139 aa20.68■□□□□ 0.9
HMGXB3-201ENST00000502717 FKBP5Q13451 457 aaPredicted RBP20.67■□□□□ 0.9
HMGXB3-201ENST00000502717 SLC52A1Q9NWF4 448 aa20.67■□□□□ 0.9
HMGXB3-201ENST00000502717 FIBPO43427 364 aa20.67■□□□□ 0.9
HMGXB3-201ENST00000502717 CCDC112Q8NEF3 446 aa20.67■□□□□ 0.9
HMGXB3-201ENST00000502717 PDCP20941 246 aa20.66■□□□□ 0.9
HMGXB3-201ENST00000502717 SPC24Q8NBT2 197 aa20.66■□□□□ 0.9
HMGXB3-201ENST00000502717 IFIT2P09913 472 aaKnown RBP20.66■□□□□ 0.9
HMGXB3-201ENST00000502717 CCDC27Q2M243 656 aa20.66■□□□□ 0.9
HMGXB3-201ENST00000502717 GPATCH8Q9UKJ3 1502 aaKnown RBP20.66■□□□□ 0.9
HMGXB3-201ENST00000502717 PRKAR2BP31323 418 aa20.65■□□□□ 0.9
HMGXB3-201ENST00000502717 NAT10Q9H0A0 1025 aaKnown RBP20.65■□□□□ 0.9
HMGXB3-201ENST00000502717 MPNDQ8N594 471 aa20.65■□□□□ 0.9
HMGXB3-201ENST00000502717 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
HMGXB3-201ENST00000502717 LTV1Q96GA3 475 aaPredicted RBP20.64■□□□□ 0.9
HMGXB3-201ENST00000502717 RALGAPBQ86X10 1494 aa20.64■□□□□ 0.9
HMGXB3-201ENST00000502717 GNAI3P08754 354 aa20.64■□□□□ 0.89
HMGXB3-201ENST00000502717 SETQ01105 290 aaPredicted RBP20.64■□□□□ 0.89
HMGXB3-201ENST00000502717 RRAGDQ9NQL2 400 aaPredicted RBP20.64■□□□□ 0.89
HMGXB3-201ENST00000502717 RPGRIP1LQ68CZ1 1315 aa20.64■□□□□ 0.89
HMGXB3-201ENST00000502717 NOM1Q5C9Z4 860 aaKnown RBP20.64■□□□□ 0.89
HMGXB3-201ENST00000502717 RAPGEF6Q8TEU7 1601 aa20.64■□□□□ 0.89
HMGXB3-201ENST00000502717 BAG4O95429 457 aaKnown RBP20.63■□□□□ 0.89
HMGXB3-201ENST00000502717 CWC15Q9P013 229 aaKnown RBP20.63■□□□□ 0.89
HMGXB3-201ENST00000502717 PSME1Q06323 249 aa20.62■□□□□ 0.89
HMGXB3-201ENST00000502717 BMP2KLQ5H9B9 411 aa20.62■□□□□ 0.89
HMGXB3-201ENST00000502717 CNTROBQ8N137 903 aa20.62■□□□□ 0.89
HMGXB3-201ENST00000502717 GORABQ5T7V8 394 aa20.62■□□□□ 0.89
HMGXB3-201ENST00000502717 PSMA5P28066 241 aa20.62■□□□□ 0.89
HMGXB3-201ENST00000502717 SSH1Q8WYL5 1049 aa20.61■□□□□ 0.89
HMGXB3-201ENST00000502717 NUP153P49790 1475 aaKnown RBP20.61■□□□□ 0.89
HMGXB3-201ENST00000502717 TPM1P09493 284 aa20.61■□□□□ 0.89
HMGXB3-201ENST00000502717 AEBP1Q8IUX7 1158 aa20.61■□□□□ 0.89
HMGXB3-201ENST00000502717 RAPGEF3O95398 923 aa20.6■□□□□ 0.89
HMGXB3-201ENST00000502717 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
HMGXB3-201ENST00000502717 TAF7LQ5H9L4 462 aa20.6■□□□□ 0.89
HMGXB3-201ENST00000502717 RPAP2Q8IXW5 612 aaPredicted RBP20.6■□□□□ 0.89
HMGXB3-201ENST00000502717 SNX21Q969T3 373 aa20.6■□□□□ 0.89
HMGXB3-201ENST00000502717 TSPYL4Q9UJ04 414 aa20.6■□□□□ 0.89
HMGXB3-201ENST00000502717 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
HMGXB3-201ENST00000502717 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
HMGXB3-201ENST00000502717 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
HMGXB3-201ENST00000502717 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
HMGXB3-201ENST00000502717 HS1BP3Q53T59 392 aa20.58■□□□□ 0.89
HMGXB3-201ENST00000502717 C9orf78Q9NZ63 289 aaPredicted RBP20.58■□□□□ 0.89
HMGXB3-201ENST00000502717 CBX1P83916 185 aa20.58■□□□□ 0.88
HMGXB3-201ENST00000502717 UBTFL1P0CB47 393 aaPredicted RBP20.58■□□□□ 0.88
HMGXB3-201ENST00000502717 TULP1O00294 542 aaPredicted RBP20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 CCP110O43303 1012 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 HDAC1Q13547 482 aaPredicted RBP20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 DHX8Q14562 1220 aaKnown RBP20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 CFAP43Q8NDM7 1665 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 PRIMPOLQ96LW4 560 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 OFD1O75665 1012 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 GNAI2P04899 355 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 ACBD3Q9H3P7 528 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 PCDHB15Q9Y5E8 787 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 POGZQ7Z3K3 1410 aa20.57■□□□□ 0.88
HMGXB3-201ENST00000502717 ABCC11Q96J66 1382 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms