RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 MAPK8IP3Q9UPT6 1336 aa21.33■■□□□ 1
VCAN-204ENST00000502527 PNNQ9H307 717 aaKnown RBP21.32■■□□□ 1
VCAN-204ENST00000502527 TMPOP42166 694 aaKnown RBP21.32■■□□□ 1
VCAN-204ENST00000502527 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
VCAN-204ENST00000502527 PNPLA6Q8IY17 1366 aa21.3■■□□□ 1
VCAN-204ENST00000502527 PMFBP1Q8TBY8 1022 aa21.3■■□□□ 1
VCAN-204ENST00000502527 IL16Q14005 1332 aa21.29■■□□□ 1
VCAN-204ENST00000502527 MLECQ14165 292 aa21.28■■□□□ 1
VCAN-204ENST00000502527 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.28■■□□□ 1
VCAN-204ENST00000502527 ATP7BP35670 1465 aa21.28■■□□□ 1
VCAN-204ENST00000502527 WAPLQ7Z5K2 1190 aa21.28■■□□□ 1
VCAN-204ENST00000502527 BCL2L13Q9BXK5 485 aa21.28■■□□□ 1
VCAN-204ENST00000502527 RTL5Q5HYW3 569 aaPredicted RBP21.27■■□□□ 1
VCAN-204ENST00000502527 TRIM35Q9UPQ4 493 aa21.27■■□□□ 1
VCAN-204ENST00000502527 RLBP1P12271 317 aa21.27■□□□□ 0.99
VCAN-204ENST00000502527 KIF20BQ96Q89 1820 aa21.25■□□□□ 0.99
VCAN-204ENST00000502527 ZKSCAN2Q63HK3 967 aa21.25■□□□□ 0.99
VCAN-204ENST00000502527 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
VCAN-204ENST00000502527 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
VCAN-204ENST00000502527 TSR2Q969E8 191 aaKnown RBP21.24■□□□□ 0.99
VCAN-204ENST00000502527 FCHSD2O94868 740 aa21.24■□□□□ 0.99
VCAN-204ENST00000502527 RIPK4P57078 832 aa21.24■□□□□ 0.99
VCAN-204ENST00000502527 EXOSC9Q06265 439 aaKnown RBP21.23■□□□□ 0.99
VCAN-204ENST00000502527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.23■□□□□ 0.99
VCAN-204ENST00000502527 TNNQ9UQP3 1299 aa21.23■□□□□ 0.99
VCAN-204ENST00000502527 HDGFP51858 240 aaKnown RBP21.22■□□□□ 0.99
VCAN-204ENST00000502527 PPM1GO15355 546 aaPredicted RBP21.22■□□□□ 0.99
VCAN-204ENST00000502527 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
VCAN-204ENST00000502527 DZIP1LQ8IYY4 767 aaKnown RBP21.22■□□□□ 0.99
VCAN-204ENST00000502527 PCDHB15Q9Y5E8 787 aa21.22■□□□□ 0.99
VCAN-204ENST00000502527 ZMYM3Q14202 1370 aa21.21■□□□□ 0.99
VCAN-204ENST00000502527 WASLO00401 505 aaPredicted RBP21.21■□□□□ 0.99
VCAN-204ENST00000502527 DEKP35659 375 aaKnown RBP21.21■□□□□ 0.99
VCAN-204ENST00000502527 FTSJ3Q8IY81 847 aaKnown RBP21.21■□□□□ 0.99
VCAN-204ENST00000502527 RWDD1Q9H446 243 aaPredicted RBP21.21■□□□□ 0.99
VCAN-204ENST00000502527 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
VCAN-204ENST00000502527 SMC4Q9NTJ3 1288 aa21.2■□□□□ 0.99
VCAN-204ENST00000502527 POLKQ9UBT6 870 aa21.2■□□□□ 0.99
VCAN-204ENST00000502527 DAXXQ9UER7 740 aaPredicted RBP21.2■□□□□ 0.99
VCAN-204ENST00000502527 SIRT1Q96EB6 747 aa21.2■□□□□ 0.98
VCAN-204ENST00000502527 NEFMP07197 916 aa21.19■□□□□ 0.98
VCAN-204ENST00000502527 METP08581 1390 aa21.19■□□□□ 0.98
VCAN-204ENST00000502527 EDC4Q6P2E9 1401 aaKnown RBP21.19■□□□□ 0.98
VCAN-204ENST00000502527 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
VCAN-204ENST00000502527 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
VCAN-204ENST00000502527 CPSF1Q10570 1443 aaKnown RBP21.18■□□□□ 0.98
VCAN-204ENST00000502527 USP35Q9P2H5 1018 aa21.18■□□□□ 0.98
VCAN-204ENST00000502527 PPIP5K1Q6PFW1 1433 aa21.18■□□□□ 0.98
VCAN-204ENST00000502527 FAM135BQ49AJ0 1406 aa21.17■□□□□ 0.98
VCAN-204ENST00000502527 SSH1Q8WYL5 1049 aa21.17■□□□□ 0.98
VCAN-204ENST00000502527 RSPH6AQ9H0K4 717 aa21.17■□□□□ 0.98
VCAN-204ENST00000502527 TXNDC2Q86VQ3 553 aa21.16■□□□□ 0.98
VCAN-204ENST00000502527 PRKAR2BP31323 418 aa21.15■□□□□ 0.98
VCAN-204ENST00000502527 LRRC7Q96NW7 1537 aa21.15■□□□□ 0.98
VCAN-204ENST00000502527 TECPR2O15040 1411 aa21.14■□□□□ 0.98
VCAN-204ENST00000502527 TRIM27P14373 513 aa21.14■□□□□ 0.97
VCAN-204ENST00000502527 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.97
VCAN-204ENST00000502527 NUDT16Q96DE0 195 aaKnown RBP21.14■□□□□ 0.97
VCAN-204ENST00000502527 TNRQ92752 1358 aa21.13■□□□□ 0.97
VCAN-204ENST00000502527 DDX19BQ9UMR2 479 aa21.13■□□□□ 0.97
VCAN-204ENST00000502527 PDZRN3Q9UPQ7 1066 aa21.13■□□□□ 0.97
VCAN-204ENST00000502527 CCDC61Q9Y6R9 512 aa21.13■□□□□ 0.97
VCAN-204ENST00000502527 AATKQ6ZMQ8 1374 aa21.12■□□□□ 0.97
VCAN-204ENST00000502527 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
VCAN-204ENST00000502527 FBLN1P23142 703 aa21.12■□□□□ 0.97
VCAN-204ENST00000502527 KIF16BQ96L93 1317 aa21.11■□□□□ 0.97
VCAN-204ENST00000502527 ALDH1L2Q3SY69 923 aa21.11■□□□□ 0.97
VCAN-204ENST00000502527 NME9Q86XW9 330 aa21.11■□□□□ 0.97
VCAN-204ENST00000502527 KNDC1Q76NI1 1749 aa21.11■□□□□ 0.97
VCAN-204ENST00000502527 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
VCAN-204ENST00000502527 NFE2L2Q16236 605 aa21.11■□□□□ 0.97
VCAN-204ENST00000502527 NOB1Q9ULX3 412 aaKnown RBP21.11■□□□□ 0.97
VCAN-204ENST00000502527 CDK12Q9NYV4 1490 aaPredicted RBP21.1■□□□□ 0.97
VCAN-204ENST00000502527 ZNF428Q96B54 188 aa21.1■□□□□ 0.97
VCAN-204ENST00000502527 COG3Q96JB2 828 aa21.1■□□□□ 0.97
VCAN-204ENST00000502527 EMILIN1Q9Y6C2 1016 aa21.1■□□□□ 0.97
VCAN-204ENST00000502527 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
VCAN-204ENST00000502527 IL13P35225 146 aa21.09■□□□□ 0.97
VCAN-204ENST00000502527 TMEM2Q9UHN6 1383 aa21.09■□□□□ 0.97
VCAN-204ENST00000502527 CPS1P31327 1500 aa21.09■□□□□ 0.97
VCAN-204ENST00000502527 SLC4A3P48751 1232 aa21.09■□□□□ 0.97
VCAN-204ENST00000502527 ITPRIPQ8IWB1 547 aa21.09■□□□□ 0.97
VCAN-204ENST00000502527 ZNF692Q9BU19 519 aaPredicted RBP21.09■□□□□ 0.97
VCAN-204ENST00000502527 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
VCAN-204ENST00000502527 KIF13AQ9H1H9 1805 aa21.08■□□□□ 0.96
VCAN-204ENST00000502527 HMOX1P09601 288 aa21.08■□□□□ 0.96
VCAN-204ENST00000502527 PHACTR3Q96KR7 559 aa21.07■□□□□ 0.96
VCAN-204ENST00000502527 USP19O94966 1318 aa21.07■□□□□ 0.96
VCAN-204ENST00000502527 MAP2P11137 1827 aaKnown RBP21.06■□□□□ 0.96
VCAN-204ENST00000502527 BRPF1P55201 1214 aaPredicted RBP21.05■□□□□ 0.96
VCAN-204ENST00000502527 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
VCAN-204ENST00000502527 ZRANB1Q9UGI0 708 aa21.05■□□□□ 0.96
VCAN-204ENST00000502527 TMEM57Q8N5G2 664 aa21.05■□□□□ 0.96
VCAN-204ENST00000502527 SEC24BO95487 1268 aa21.04■□□□□ 0.96
VCAN-204ENST00000502527 NCKAP5LQ9HCH0 1330 aa21.04■□□□□ 0.96
VCAN-204ENST00000502527 MON2Q7Z3U7 1717 aa21.04■□□□□ 0.96
VCAN-204ENST00000502527 GNAI1P63096 354 aa21.03■□□□□ 0.96
VCAN-204ENST00000502527 LMOD3Q0VAK6 560 aa21.03■□□□□ 0.96
VCAN-204ENST00000502527 UPF2Q9HAU5 1272 aaKnown RBP21.03■□□□□ 0.96
VCAN-204ENST00000502527 IFT57Q9NWB7 429 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms