RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 A0A1W2PP64 1363 aa29.56■■■□□ 2.32
SNF8-202ENST00000502492 NFKBIBQ15653 356 aa29.55■■■□□ 2.32
SNF8-202ENST00000502492 USP19O94966 1318 aa29.55■■■□□ 2.32
SNF8-202ENST00000502492 KDM4FA0A1W2PPD8 638 aa29.54■■■□□ 2.32
SNF8-202ENST00000502492 PCDHB15Q9Y5E8 787 aa29.54■■■□□ 2.32
SNF8-202ENST00000502492 UBR1Q8IWV7 1749 aa29.53■■■□□ 2.32
SNF8-202ENST00000502492 TNNQ9UQP3 1299 aa29.53■■■□□ 2.32
SNF8-202ENST00000502492 SAFB2Q14151 953 aaKnown RBP eCLIP29.51■■■□□ 2.31
SNF8-202ENST00000502492 BCL2L13Q9BXK5 485 aa29.51■■■□□ 2.31
SNF8-202ENST00000502492 COL3A1P02461 1466 aaPredicted RBP29.5■■■□□ 2.31
SNF8-202ENST00000502492 CT47B1P0C2W7 299 aaPredicted RBP29.5■■■□□ 2.31
SNF8-202ENST00000502492 PLEKHF1Q96S99 279 aa29.5■■■□□ 2.31
SNF8-202ENST00000502492 RIMS2Q9UQ26 1411 aa29.49■■■□□ 2.31
SNF8-202ENST00000502492 MED14O60244 1454 aa29.49■■■□□ 2.31
SNF8-202ENST00000502492 ATAD2Q6PL18 1390 aa29.49■■■□□ 2.31
SNF8-202ENST00000502492 SRPK2P78362 688 aaKnown RBP29.48■■■□□ 2.31
SNF8-202ENST00000502492 STK26Q9P289 416 aa29.48■■■□□ 2.31
SNF8-202ENST00000502492 TMEM2Q9UHN6 1383 aa29.47■■■□□ 2.31
SNF8-202ENST00000502492 CEP170BQ9Y4F5 1589 aaPredicted RBP29.46■■■□□ 2.31
SNF8-202ENST00000502492 ANKRD26Q9UPS8 1709 aa29.46■■■□□ 2.31
SNF8-202ENST00000502492 SETD1BQ9UPS6 1966 aaKnown RBP29.46■■■□□ 2.31
SNF8-202ENST00000502492 SEC24BO95487 1268 aa29.45■■■□□ 2.31
SNF8-202ENST00000502492 CD163L1Q9NR16 1453 aa29.45■■■□□ 2.31
SNF8-202ENST00000502492 GGNBP2Q9H3C7 697 aa29.45■■■□□ 2.3
SNF8-202ENST00000502492 MVPQ14764 893 aaKnown RBP29.44■■■□□ 2.3
SNF8-202ENST00000502492 RWDD1Q9H446 243 aaPredicted RBP29.44■■■□□ 2.3
SNF8-202ENST00000502492 TERF2IPQ9NYB0 399 aa29.44■■■□□ 2.3
SNF8-202ENST00000502492 FYB1O15117 783 aa29.44■■■□□ 2.3
SNF8-202ENST00000502492 ZKSCAN2Q63HK3 967 aa29.44■■■□□ 2.3
SNF8-202ENST00000502492 TMPOP42166 694 aaKnown RBP29.43■■■□□ 2.3
SNF8-202ENST00000502492 THEMISQ8N1K5 641 aaPredicted RBP29.43■■■□□ 2.3
SNF8-202ENST00000502492 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.43■■■□□ 2.3
SNF8-202ENST00000502492 YTHDC2Q9H6S0 1430 aaKnown RBP29.43■■■□□ 2.3
SNF8-202ENST00000502492 HDGFP51858 240 aaKnown RBP29.42■■■□□ 2.3
SNF8-202ENST00000502492 TRIM35Q9UPQ4 493 aa29.42■■■□□ 2.3
SNF8-202ENST00000502492 PDZRN3Q9UPQ7 1066 aa29.42■■■□□ 2.3
SNF8-202ENST00000502492 PRAM1Q96QH2 718 aa29.41■■■□□ 2.3
SNF8-202ENST00000502492 ZNF142P52746 1687 aaPredicted RBP29.41■■■□□ 2.3
SNF8-202ENST00000502492 U2SURPO15042 1029 aaKnown RBP29.4■■■□□ 2.3
SNF8-202ENST00000502492 TSR2Q969E8 191 aaKnown RBP29.4■■■□□ 2.3
SNF8-202ENST00000502492 GSE1Q14687 1217 aa29.39■■■□□ 2.3
SNF8-202ENST00000502492 DZIP1LQ8IYY4 767 aaKnown RBP29.39■■■□□ 2.3
SNF8-202ENST00000502492 IL16Q14005 1332 aa29.39■■■□□ 2.3
SNF8-202ENST00000502492 MINK1Q8N4C8 1332 aaPredicted RBP29.39■■■□□ 2.3
SNF8-202ENST00000502492 SLIT1O75093 1534 aa29.39■■■□□ 2.3
SNF8-202ENST00000502492 ARHGAP23Q9P227 1491 aa29.39■■■□□ 2.29
SNF8-202ENST00000502492 EXOSC9Q06265 439 aaKnown RBP29.37■■■□□ 2.29
SNF8-202ENST00000502492 PNPLA6Q8IY17 1366 aa29.37■■■□□ 2.29
SNF8-202ENST00000502492 POGKQ9P215 609 aa29.37■■■□□ 2.29
SNF8-202ENST00000502492 FTSJ3Q8IY81 847 aaKnown RBP29.36■■■□□ 2.29
SNF8-202ENST00000502492 ALKQ9UM73 1620 aa29.35■■■□□ 2.29
SNF8-202ENST00000502492 LTKP29376 864 aa29.34■■■□□ 2.29
SNF8-202ENST00000502492 SMC4Q9NTJ3 1288 aa29.34■■■□□ 2.29
SNF8-202ENST00000502492 TXNDC2Q86VQ3 553 aa29.33■■■□□ 2.29
SNF8-202ENST00000502492 SENP3Q9H4L4 574 aaPredicted RBP29.33■■■□□ 2.29
SNF8-202ENST00000502492 EID1Q9Y6B2 187 aa29.33■■■□□ 2.29
SNF8-202ENST00000502492 HDGFL2Q7Z4V5 671 aaPredicted RBP29.32■■■□□ 2.28
SNF8-202ENST00000502492 SSH1Q8WYL5 1049 aa29.32■■■□□ 2.28
SNF8-202ENST00000502492 TRIM27P14373 513 aa29.32■■■□□ 2.28
SNF8-202ENST00000502492 DIAPH1O60610 1272 aaKnown RBP29.31■■■□□ 2.28
SNF8-202ENST00000502492 BECN1Q14457 450 aa29.31■■■□□ 2.28
SNF8-202ENST00000502492 FRAT2O75474 233 aaPredicted RBP29.31■■■□□ 2.28
SNF8-202ENST00000502492 CDK19Q9BWU1 502 aa29.31■■■□□ 2.28
SNF8-202ENST00000502492 PNNQ9H307 717 aaKnown RBP29.3■■■□□ 2.28
SNF8-202ENST00000502492 TBC1D32Q96NH3 1257 aa29.29■■■□□ 2.28
SNF8-202ENST00000502492 RIPK4P57078 832 aa29.29■■■□□ 2.28
SNF8-202ENST00000502492 HDAC1Q13547 482 aaPredicted RBP29.28■■■□□ 2.28
SNF8-202ENST00000502492 ATF7IPQ6VMQ6 1270 aa29.28■■■□□ 2.28
SNF8-202ENST00000502492 KIF20BQ96Q89 1820 aa29.28■■■□□ 2.28
SNF8-202ENST00000502492 CDC42BPGQ6DT37 1551 aa29.28■■■□□ 2.28
SNF8-202ENST00000502492 UPF2Q9HAU5 1272 aaKnown RBP29.28■■■□□ 2.28
SNF8-202ENST00000502492 DDX19BQ9UMR2 479 aa29.28■■■□□ 2.28
SNF8-202ENST00000502492 PLEKHG1Q9ULL1 1385 aa29.27■■■□□ 2.28
SNF8-202ENST00000502492 CABP1Q9NZU7 370 aa29.27■■■□□ 2.28
SNF8-202ENST00000502492 NRXN3Q9Y4C0 1643 aa29.25■■■□□ 2.27
SNF8-202ENST00000502492 FCHSD2O94868 740 aa29.24■■■□□ 2.27
SNF8-202ENST00000502492 NOB1Q9ULX3 412 aaKnown RBP29.23■■■□□ 2.27
SNF8-202ENST00000502492 DLC1Q96QB1 1528 aa29.23■■■□□ 2.27
SNF8-202ENST00000502492 ANKLE2Q86XL3 938 aa29.22■■■□□ 2.27
SNF8-202ENST00000502492 ITPRIPQ8IWB1 547 aa29.22■■■□□ 2.27
SNF8-202ENST00000502492 IL27Q8NEV9 243 aa29.22■■■□□ 2.27
SNF8-202ENST00000502492 KIF16BQ96L93 1317 aa29.2■■■□□ 2.27
SNF8-202ENST00000502492 LRRC7Q96NW7 1537 aa29.2■■■□□ 2.27
SNF8-202ENST00000502492 ATP7BP35670 1465 aa29.2■■■□□ 2.27
SNF8-202ENST00000502492 ALDH1L2Q3SY69 923 aa29.19■■■□□ 2.26
SNF8-202ENST00000502492 ADAMTS13Q76LX8 1427 aa29.19■■■□□ 2.26
SNF8-202ENST00000502492 SMC5Q8IY18 1101 aa29.19■■■□□ 2.26
SNF8-202ENST00000502492 ZBTB40Q9NUA8 1239 aa29.19■■■□□ 2.26
SNF8-202ENST00000502492 FAM135BQ49AJ0 1406 aa29.18■■■□□ 2.26
SNF8-202ENST00000502492 IPO8O15397 1037 aaKnown RBP29.18■■■□□ 2.26
SNF8-202ENST00000502492 TMEM57Q8N5G2 664 aa29.17■■■□□ 2.26
SNF8-202ENST00000502492 RSPH6AQ9H0K4 717 aa29.17■■■□□ 2.26
SNF8-202ENST00000502492 ANTXR1Q9H6X2 564 aa29.17■■■□□ 2.26
SNF8-202ENST00000502492 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
SNF8-202ENST00000502492 POLKQ9UBT6 870 aa29.17■■■□□ 2.26
SNF8-202ENST00000502492 PPIP5K1Q6PFW1 1433 aa29.16■■■□□ 2.26
SNF8-202ENST00000502492 BRPF1P55201 1214 aaPredicted RBP29.15■■■□□ 2.26
SNF8-202ENST00000502492 METP08581 1390 aa29.14■■■□□ 2.26
SNF8-202ENST00000502492 ZNF428Q96B54 188 aa29.14■■■□□ 2.26
SNF8-202ENST00000502492 TBC1D2Q9BYX2 928 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms