RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
USP46-203ENST00000502443 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
USP46-203ENST00000502443 PUS7Q96PZ0 661 aaKnown RBP10.22□□□□□ -0.77
USP46-203ENST00000502443 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
USP46-203ENST00000502443 SLC12A5Q9H2X9 1139 aa10.22□□□□□ -0.77
USP46-203ENST00000502443 NUTM2GQ5VZR2 741 aa10.21□□□□□ -0.77
USP46-203ENST00000502443 USP6P35125 1406 aa10.21□□□□□ -0.78
USP46-203ENST00000502443 BRD4O60885 1362 aaPredicted RBP10.2□□□□□ -0.78
USP46-203ENST00000502443 HSPA5P11021 654 aaKnown RBP10.2□□□□□ -0.78
USP46-203ENST00000502443 AFF2P51816 1311 aa10.2□□□□□ -0.78
USP46-203ENST00000502443 AKAP12Q02952 1782 aa10.2□□□□□ -0.78
USP46-203ENST00000502443 CDCA8Q53HL2 280 aa10.2□□□□□ -0.78
USP46-203ENST00000502443 ZNF772Q68DY9 489 aaPredicted RBP10.2□□□□□ -0.78
USP46-203ENST00000502443 ILDR2Q71H61 639 aa10.2□□□□□ -0.78
USP46-203ENST00000502443 HDGFL2Q7Z4V5 671 aaPredicted RBP10.2□□□□□ -0.78
USP46-203ENST00000502443 KTN1Q86UP2 1357 aaKnown RBP10.2□□□□□ -0.78
USP46-203ENST00000502443 MARF1Q9Y4F3 1742 aaKnown RBP10.2□□□□□ -0.78
USP46-203ENST00000502443 CPSF1Q10570 1443 aaKnown RBP10.19□□□□□ -0.78
USP46-203ENST00000502443 POTEAQ6S8J7 498 aa10.19□□□□□ -0.78
USP46-203ENST00000502443 TERF2IPQ9NYB0 399 aa10.19□□□□□ -0.78
USP46-203ENST00000502443 ABCA3Q99758 1704 aa10.19□□□□□ -0.78
USP46-203ENST00000502443 NINLQ9Y2I6 1382 aa10.18□□□□□ -0.78
USP46-203ENST00000502443 NLRP6P59044 892 aa10.18□□□□□ -0.78
USP46-203ENST00000502443 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
USP46-203ENST00000502443 USP21Q9UK80 565 aa10.18□□□□□ -0.78
USP46-203ENST00000502443 CD163L1Q9NR16 1453 aa10.17□□□□□ -0.78
USP46-203ENST00000502443 SSH2Q76I76 1423 aa10.17□□□□□ -0.78
USP46-203ENST00000502443 TTC21BQ7Z4L5 1316 aa10.17□□□□□ -0.78
USP46-203ENST00000502443 MON2Q7Z3U7 1717 aa10.17□□□□□ -0.78
USP46-203ENST00000502443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.17□□□□□ -0.78
USP46-203ENST00000502443 FNBP4Q8N3X1 1017 aaPredicted RBP10.17□□□□□ -0.78
USP46-203ENST00000502443 POLR3GLQ9BT43 218 aa10.17□□□□□ -0.78
USP46-203ENST00000502443 CRYBG1Q9Y4K1 1723 aa10.16□□□□□ -0.78
USP46-203ENST00000502443 A0A1W2PP64 1363 aa10.16□□□□□ -0.78
USP46-203ENST00000502443 TTC21AQ8NDW8 1320 aa10.16□□□□□ -0.78
USP46-203ENST00000502443 FAM83GA6ND36 823 aa10.16□□□□□ -0.78
USP46-203ENST00000502443 QTRT2Q9H974 415 aaKnown RBP10.16□□□□□ -0.78
USP46-203ENST00000502443 PIK3C2AO00443 1686 aa10.15□□□□□ -0.78
USP46-203ENST00000502443 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.78
USP46-203ENST00000502443 NRKQ7Z2Y5 1582 aa10.15□□□□□ -0.78
USP46-203ENST00000502443 ZC3H6P61129 1189 aaKnown RBP10.15□□□□□ -0.78
USP46-203ENST00000502443 PRDM11Q9NQV5 511 aa10.15□□□□□ -0.78
USP46-203ENST00000502443 EDC4Q6P2E9 1401 aaKnown RBP10.15□□□□□ -0.79
USP46-203ENST00000502443 USP19O94966 1318 aa10.14□□□□□ -0.79
USP46-203ENST00000502443 GCP02774 474 aa10.14□□□□□ -0.79
USP46-203ENST00000502443 RXRBP28702 533 aa10.14□□□□□ -0.79
USP46-203ENST00000502443 NME9Q86XW9 330 aa10.14□□□□□ -0.79
USP46-203ENST00000502443 TRPC5Q9UL62 973 aaPredicted RBP10.14□□□□□ -0.79
USP46-203ENST00000502443 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
USP46-203ENST00000502443 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
USP46-203ENST00000502443 KIAA0232Q92628 1395 aa10.14□□□□□ -0.79
USP46-203ENST00000502443 SLIT2O94813 1529 aa10.13□□□□□ -0.79
USP46-203ENST00000502443 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
USP46-203ENST00000502443 CHRNA2Q15822 529 aa10.13□□□□□ -0.79
USP46-203ENST00000502443 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
USP46-203ENST00000502443 BTG4Q9NY30 223 aa10.13□□□□□ -0.79
USP46-203ENST00000502443 ZRANB1Q9UGI0 708 aa10.13□□□□□ -0.79
USP46-203ENST00000502443 COL14A1Q05707 1796 aaKnown RBP10.13□□□□□ -0.79
USP46-203ENST00000502443 MYOM1P52179 1685 aa10.12□□□□□ -0.79
USP46-203ENST00000502443 ZBTB7CA1YPR0 619 aa10.12□□□□□ -0.79
USP46-203ENST00000502443 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
USP46-203ENST00000502443 SOX12O15370 315 aa10.12□□□□□ -0.79
USP46-203ENST00000502443 RBM6P78332 1123 aaKnown RBP10.12□□□□□ -0.79
USP46-203ENST00000502443 NWD2Q9ULI1 1742 aa10.12□□□□□ -0.79
USP46-203ENST00000502443 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.11□□□□□ -0.79
USP46-203ENST00000502443 ATRNO75882 1429 aa10.11□□□□□ -0.79
USP46-203ENST00000502443 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
USP46-203ENST00000502443 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
USP46-203ENST00000502443 SLIT3O75094 1523 aa10.11□□□□□ -0.79
USP46-203ENST00000502443 CPDO75976 1380 aa10.11□□□□□ -0.79
USP46-203ENST00000502443 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
USP46-203ENST00000502443 CARD14Q9BXL6 1004 aa10.1□□□□□ -0.79
USP46-203ENST00000502443 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
USP46-203ENST00000502443 EVA1CP58658 441 aa10.09□□□□□ -0.79
USP46-203ENST00000502443 VPS72Q15906 364 aa10.09□□□□□ -0.79
USP46-203ENST00000502443 COG3Q96JB2 828 aa10.09□□□□□ -0.79
USP46-203ENST00000502443 STRN4Q9NRL3 753 aa10.09□□□□□ -0.79
USP46-203ENST00000502443 KIF7Q2M1P5 1343 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 NSD3Q9BZ95 1437 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 FYB1O15117 783 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 ARHGEF25Q86VW2 580 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 GGNBP2Q9H3C7 697 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 PANK3Q9H999 370 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
USP46-203ENST00000502443 OVOS2A0A0J9YW53 1432 aa10.07□□□□□ -0.8
USP46-203ENST00000502443 OVOS2Q6IE36 1432 aa10.07□□□□□ -0.8
USP46-203ENST00000502443 CAMTA1Q9Y6Y1 1673 aa10.07□□□□□ -0.8
USP46-203ENST00000502443 CDK12Q9NYV4 1490 aaPredicted RBP10.07□□□□□ -0.8
USP46-203ENST00000502443 AATKQ6ZMQ8 1374 aa10.07□□□□□ -0.8
USP46-203ENST00000502443 SOCS7O14512 581 aa10.07□□□□□ -0.8
USP46-203ENST00000502443 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
USP46-203ENST00000502443 NFAT5O94916 1531 aa10.07□□□□□ -0.8
USP46-203ENST00000502443 LMO7Q8WWI1 1683 aa10.06□□□□□ -0.8
USP46-203ENST00000502443 GLI3P10071 1580 aa10.06□□□□□ -0.8
USP46-203ENST00000502443 RGS12O14924 1447 aa10.06□□□□□ -0.8
USP46-203ENST00000502443 LTN1O94822 1766 aa10.06□□□□□ -0.8
USP46-203ENST00000502443 CGNL1Q0VF96 1302 aa10.06□□□□□ -0.8
USP46-203ENST00000502443 A0A0G2JS52 829 aa10.05□□□□□ -0.8
USP46-203ENST00000502443 MYT1Q01538 1121 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms