RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 PNNQ9H307 717 aaKnown RBP11.22□□□□□ -0.61
SPIRE1-211ENST00000498803 FMN2Q9NZ56 1722 aa11.22□□□□□ -0.61
SPIRE1-211ENST00000498803 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
SPIRE1-211ENST00000498803 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
SPIRE1-211ENST00000498803 AKAP12Q02952 1782 aa11.21□□□□□ -0.61
SPIRE1-211ENST00000498803 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
SPIRE1-211ENST00000498803 KIF20BQ96Q89 1820 aa11.21□□□□□ -0.62
SPIRE1-211ENST00000498803 SSH2Q76I76 1423 aa11.2□□□□□ -0.62
SPIRE1-211ENST00000498803 ATF3P18847 181 aa11.2□□□□□ -0.62
SPIRE1-211ENST00000498803 NCBP3Q53F19 620 aaKnown RBP11.2□□□□□ -0.62
SPIRE1-211ENST00000498803 NME9Q86XW9 330 aa11.2□□□□□ -0.62
SPIRE1-211ENST00000498803 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
SPIRE1-211ENST00000498803 USP31Q70CQ4 1352 aa11.19□□□□□ -0.62
SPIRE1-211ENST00000498803 PNPLA6Q8IY17 1366 aa11.19□□□□□ -0.62
SPIRE1-211ENST00000498803 CADPS2Q86UW7 1296 aa11.19□□□□□ -0.62
SPIRE1-211ENST00000498803 NALCNQ8IZF0 1738 aa11.18□□□□□ -0.62
SPIRE1-211ENST00000498803 TMEM94Q12767 1356 aa11.18□□□□□ -0.62
SPIRE1-211ENST00000498803 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
SPIRE1-211ENST00000498803 SMG6Q86US8 1419 aaKnown RBP11.18□□□□□ -0.62
SPIRE1-211ENST00000498803 MSH6P52701 1360 aa11.17□□□□□ -0.62
SPIRE1-211ENST00000498803 DIAPH1O60610 1272 aaKnown RBP11.17□□□□□ -0.62
SPIRE1-211ENST00000498803 PSME1Q06323 249 aa11.17□□□□□ -0.62
SPIRE1-211ENST00000498803 RUNDC1Q96C34 613 aa11.17□□□□□ -0.62
SPIRE1-211ENST00000498803 POLKQ9UBT6 870 aa11.17□□□□□ -0.62
SPIRE1-211ENST00000498803 OVOS2A0A0J9YW53 1432 aa11.17□□□□□ -0.62
SPIRE1-211ENST00000498803 OVOS2Q6IE36 1432 aa11.17□□□□□ -0.62
SPIRE1-211ENST00000498803 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
SPIRE1-211ENST00000498803 NEFLP07196 543 aa11.16□□□□□ -0.62
SPIRE1-211ENST00000498803 CDK12Q9NYV4 1490 aaPredicted RBP11.15□□□□□ -0.62
SPIRE1-211ENST00000498803 NEFMP07197 916 aa11.15□□□□□ -0.62
SPIRE1-211ENST00000498803 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
SPIRE1-211ENST00000498803 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
SPIRE1-211ENST00000498803 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
SPIRE1-211ENST00000498803 KIF24Q5T7B8 1368 aa11.15□□□□□ -0.63
SPIRE1-211ENST00000498803 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
SPIRE1-211ENST00000498803 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
SPIRE1-211ENST00000498803 NLRP6P59044 892 aa11.14□□□□□ -0.63
SPIRE1-211ENST00000498803 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
SPIRE1-211ENST00000498803 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
SPIRE1-211ENST00000498803 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
SPIRE1-211ENST00000498803 U2SURPO15042 1029 aaKnown RBP11.13□□□□□ -0.63
SPIRE1-211ENST00000498803 PPM1GO15355 546 aaPredicted RBP11.13□□□□□ -0.63
SPIRE1-211ENST00000498803 FCHSD2O94868 740 aa11.13□□□□□ -0.63
SPIRE1-211ENST00000498803 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
SPIRE1-211ENST00000498803 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
SPIRE1-211ENST00000498803 APAF1O14727 1248 aa11.12□□□□□ -0.63
SPIRE1-211ENST00000498803 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
SPIRE1-211ENST00000498803 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
SPIRE1-211ENST00000498803 KCNH5Q8NCM2 988 aa11.12□□□□□ -0.63
SPIRE1-211ENST00000498803 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
SPIRE1-211ENST00000498803 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
SPIRE1-211ENST00000498803 MST1RQ04912 1400 aa11.11□□□□□ -0.63
SPIRE1-211ENST00000498803 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
SPIRE1-211ENST00000498803 ORAI2Q96SN7 254 aa11.11□□□□□ -0.63
SPIRE1-211ENST00000498803 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
SPIRE1-211ENST00000498803 SBNO1A3KN83 1393 aa11.11□□□□□ -0.63
SPIRE1-211ENST00000498803 NPHP3Q7Z494 1330 aa11.1□□□□□ -0.63
SPIRE1-211ENST00000498803 FOXO3O43524 673 aa11.1□□□□□ -0.63
SPIRE1-211ENST00000498803 CCDC146Q8IYE0 955 aa11.1□□□□□ -0.63
SPIRE1-211ENST00000498803 SHPRHQ149N8 1683 aa11.1□□□□□ -0.63
SPIRE1-211ENST00000498803 RGPD8O14715 1765 aaPredicted RBP11.1□□□□□ -0.63
SPIRE1-211ENST00000498803 ZNF521Q96K83 1311 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 USP54Q70EL1 1684 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 FLT4P35916 1363 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 E9PSI1 815 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 IL13P35225 146 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 AMPHP49418 695 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 RRS1Q15050 365 aaKnown RBP11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 KRT28Q7Z3Y7 464 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 WDR63Q8IWG1 891 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 TCP11L2Q8N4U5 519 aa11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
SPIRE1-211ENST00000498803 RTL1A6NKG5 1358 aa11.08□□□□□ -0.64
SPIRE1-211ENST00000498803 STRCP1A6NGW2 1772 aa11.08□□□□□ -0.64
SPIRE1-211ENST00000498803 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
SPIRE1-211ENST00000498803 PLEKHF1Q96S99 279 aa11.07□□□□□ -0.64
SPIRE1-211ENST00000498803 PHF23Q9BUL5 403 aaPredicted RBP11.07□□□□□ -0.64
SPIRE1-211ENST00000498803 PIK3C2AO00443 1686 aa11.07□□□□□ -0.64
SPIRE1-211ENST00000498803 MAP2P11137 1827 aaKnown RBP11.07□□□□□ -0.64
SPIRE1-211ENST00000498803 FBLN1P23142 703 aa11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 CALD1Q05682 793 aaKnown RBP11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 WWC1Q8IX03 1113 aa11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 SLAIN2Q9P270 581 aa11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 SUPT16HQ9Y5B9 1047 aaKnown RBP11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 IQSEC2Q5JU85 1478 aa11.06□□□□□ -0.64
SPIRE1-211ENST00000498803 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
SPIRE1-211ENST00000498803 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
SPIRE1-211ENST00000498803 EIF4A2Q14240 407 aaKnown RBP11.05□□□□□ -0.64
SPIRE1-211ENST00000498803 MYH16Q9H6N6 1097 aa11.05□□□□□ -0.64
SPIRE1-211ENST00000498803 USP19O94966 1318 aa11.05□□□□□ -0.64
SPIRE1-211ENST00000498803 IL16Q14005 1332 aa11.05□□□□□ -0.64
SPIRE1-211ENST00000498803 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
SPIRE1-211ENST00000498803 SOX12O15370 315 aa11.04□□□□□ -0.64
SPIRE1-211ENST00000498803 PRKAR2BP31323 418 aa11.04□□□□□ -0.64
SPIRE1-211ENST00000498803 HSP90AB2PQ58FF8 381 aa11.04□□□□□ -0.64
SPIRE1-211ENST00000498803 TRMT2AQ8IZ69 625 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms