RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 NLRP13Q86W25 1043 aa17.57■□□□□ 0.4
TMEM39B-209ENST00000498613 NUTM2BA6NNL0 878 aaPredicted RBP17.56■□□□□ 0.4
TMEM39B-209ENST00000498613 NUTM2EB1AL46 878 aaPredicted RBP17.56■□□□□ 0.4
TMEM39B-209ENST00000498613 MEX3CQ5U5Q3 659 aaKnown RBP17.56■□□□□ 0.4
TMEM39B-209ENST00000498613 NUTM2AQ8IVF1 878 aaPredicted RBP17.56■□□□□ 0.4
TMEM39B-209ENST00000498613 UPF1Q92900 1129 aaKnown RBP eCLIP17.56■□□□□ 0.4
TMEM39B-209ENST00000498613 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
TMEM39B-209ENST00000498613 TTC21AQ8NDW8 1320 aa17.55■□□□□ 0.4
TMEM39B-209ENST00000498613 PXDNQ92626 1479 aa17.54■□□□□ 0.4
TMEM39B-209ENST00000498613 NLRP6P59044 892 aa17.53■□□□□ 0.4
TMEM39B-209ENST00000498613 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
TMEM39B-209ENST00000498613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.53■□□□□ 0.4
TMEM39B-209ENST00000498613 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
TMEM39B-209ENST00000498613 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
TMEM39B-209ENST00000498613 PLEKHG5O94827 1062 aa17.52■□□□□ 0.4
TMEM39B-209ENST00000498613 USP6P35125 1406 aa17.52■□□□□ 0.4
TMEM39B-209ENST00000498613 ANKRD36BQ8N2N9 1353 aa17.52■□□□□ 0.39
TMEM39B-209ENST00000498613 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
TMEM39B-209ENST00000498613 CPSF1Q10570 1443 aaKnown RBP17.51■□□□□ 0.39
TMEM39B-209ENST00000498613 SRCAPQ6ZRS2 3230 aa17.51■□□□□ 0.39
TMEM39B-209ENST00000498613 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
TMEM39B-209ENST00000498613 KIF7Q2M1P5 1343 aa17.5■□□□□ 0.39
TMEM39B-209ENST00000498613 TOPAZ1Q8N9V7 1692 aa17.5■□□□□ 0.39
TMEM39B-209ENST00000498613 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
TMEM39B-209ENST00000498613 NUTM2GQ5VZR2 741 aa17.49■□□□□ 0.39
TMEM39B-209ENST00000498613 KCNH5Q8NCM2 988 aa17.49■□□□□ 0.39
TMEM39B-209ENST00000498613 PANK3Q9H999 370 aa17.49■□□□□ 0.39
TMEM39B-209ENST00000498613 KNSTRNQ9Y448 316 aa17.49■□□□□ 0.39
TMEM39B-209ENST00000498613 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
TMEM39B-209ENST00000498613 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
TMEM39B-209ENST00000498613 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
TMEM39B-209ENST00000498613 NGLY1Q96IV0 654 aa17.47■□□□□ 0.39
TMEM39B-209ENST00000498613 COG3Q96JB2 828 aa17.47■□□□□ 0.39
TMEM39B-209ENST00000498613 CCDC7Q96M83 1385 aa17.46■□□□□ 0.39
TMEM39B-209ENST00000498613 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.39
TMEM39B-209ENST00000498613 CGNL1Q0VF96 1302 aa17.46■□□□□ 0.38
TMEM39B-209ENST00000498613 RXRBP28702 533 aa17.45■□□□□ 0.38
TMEM39B-209ENST00000498613 WASHC2AQ641Q2 1341 aa17.45■□□□□ 0.38
TMEM39B-209ENST00000498613 GCP02774 474 aa17.43■□□□□ 0.38
TMEM39B-209ENST00000498613 NME9Q86XW9 330 aa17.43■□□□□ 0.38
TMEM39B-209ENST00000498613 C8orf37Q96NL8 207 aa17.43■□□□□ 0.38
TMEM39B-209ENST00000498613 SSH2Q76I76 1423 aa17.43■□□□□ 0.38
TMEM39B-209ENST00000498613 CARD14Q9BXL6 1004 aa17.42■□□□□ 0.38
TMEM39B-209ENST00000498613 CD163L1Q9NR16 1453 aa17.42■□□□□ 0.38
TMEM39B-209ENST00000498613 FYB1O15117 783 aa17.41■□□□□ 0.38
TMEM39B-209ENST00000498613 PRDM11Q9NQV5 511 aa17.41■□□□□ 0.38
TMEM39B-209ENST00000498613 AFF2P51816 1311 aa17.41■□□□□ 0.38
TMEM39B-209ENST00000498613 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
TMEM39B-209ENST00000498613 RGS12O14924 1447 aa17.4■□□□□ 0.38
TMEM39B-209ENST00000498613 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
TMEM39B-209ENST00000498613 ZC3H6P61129 1189 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-209ENST00000498613 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
TMEM39B-209ENST00000498613 TRPM3Q9HCF6 1732 aaPredicted RBP17.39■□□□□ 0.37
TMEM39B-209ENST00000498613 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
TMEM39B-209ENST00000498613 GGNBP2Q9H3C7 697 aa17.39■□□□□ 0.37
TMEM39B-209ENST00000498613 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
TMEM39B-209ENST00000498613 SOX12O15370 315 aa17.38■□□□□ 0.37
TMEM39B-209ENST00000498613 USP19O94966 1318 aa17.38■□□□□ 0.37
TMEM39B-209ENST00000498613 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
TMEM39B-209ENST00000498613 EVA1CP58658 441 aa17.37■□□□□ 0.37
TMEM39B-209ENST00000498613 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
TMEM39B-209ENST00000498613 MON2Q7Z3U7 1717 aa17.36■□□□□ 0.37
TMEM39B-209ENST00000498613 FAM83GA6ND36 823 aa17.36■□□□□ 0.37
TMEM39B-209ENST00000498613 MORC1Q86VD1 984 aa17.36■□□□□ 0.37
TMEM39B-209ENST00000498613 USP21Q9UK80 565 aa17.36■□□□□ 0.37
TMEM39B-209ENST00000498613 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
TMEM39B-209ENST00000498613 EP400Q96L91 3159 aa17.34■□□□□ 0.37
TMEM39B-209ENST00000498613 NSD2O96028 1365 aa17.34■□□□□ 0.37
TMEM39B-209ENST00000498613 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
TMEM39B-209ENST00000498613 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
TMEM39B-209ENST00000498613 AMPHP49418 695 aa17.33■□□□□ 0.36
TMEM39B-209ENST00000498613 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
TMEM39B-209ENST00000498613 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
TMEM39B-209ENST00000498613 RBM6P78332 1123 aaKnown RBP17.32■□□□□ 0.36
TMEM39B-209ENST00000498613 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
TMEM39B-209ENST00000498613 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
TMEM39B-209ENST00000498613 BTG4Q9NY30 223 aa17.32■□□□□ 0.36
TMEM39B-209ENST00000498613 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
TMEM39B-209ENST00000498613 CPDO75976 1380 aa17.31■□□□□ 0.36
TMEM39B-209ENST00000498613 CHRNA2Q15822 529 aa17.31■□□□□ 0.36
TMEM39B-209ENST00000498613 QTRT2Q9H974 415 aaKnown RBP17.31■□□□□ 0.36
TMEM39B-209ENST00000498613 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
TMEM39B-209ENST00000498613 MYOM1P52179 1685 aa17.31■□□□□ 0.36
TMEM39B-209ENST00000498613 CC2D1BQ5T0F9 858 aaKnown RBP17.29■□□□□ 0.36
TMEM39B-209ENST00000498613 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 STRN4Q9NRL3 753 aa17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 PIK3C2AO00443 1686 aa17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
TMEM39B-209ENST00000498613 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
TMEM39B-209ENST00000498613 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
TMEM39B-209ENST00000498613 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
TMEM39B-209ENST00000498613 IP6K1Q92551 441 aa17.26■□□□□ 0.35
TMEM39B-209ENST00000498613 SLIT3O75094 1523 aa17.26■□□□□ 0.35
TMEM39B-209ENST00000498613 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
TMEM39B-209ENST00000498613 VPS72Q15906 364 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms