RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 U2SURPO15042 1029 aaKnown RBP25.15■■□□□ 1.62
NKX2-1-202ENST00000498187 COL3A1P02461 1466 aaPredicted RBP25.15■■□□□ 1.62
NKX2-1-202ENST00000498187 ANKRD26Q9UPS8 1709 aa25.15■■□□□ 1.62
NKX2-1-202ENST00000498187 MINK1Q8N4C8 1332 aaPredicted RBP25.14■■□□□ 1.62
NKX2-1-202ENST00000498187 ATAD2Q6PL18 1390 aa25.14■■□□□ 1.62
NKX2-1-202ENST00000498187 TSR2Q969E8 191 aaKnown RBP25.14■■□□□ 1.61
NKX2-1-202ENST00000498187 PLEKHF1Q96S99 279 aa25.14■■□□□ 1.61
NKX2-1-202ENST00000498187 ZMYM3Q14202 1370 aa25.13■■□□□ 1.61
NKX2-1-202ENST00000498187 ZKSCAN2Q63HK3 967 aa25.13■■□□□ 1.61
NKX2-1-202ENST00000498187 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
NKX2-1-202ENST00000498187 MVPQ14764 893 aaKnown RBP25.12■■□□□ 1.61
NKX2-1-202ENST00000498187 PDZRN3Q9UPQ7 1066 aa25.12■■□□□ 1.61
NKX2-1-202ENST00000498187 CLTCQ00610 1675 aaKnown RBP25.12■■□□□ 1.61
NKX2-1-202ENST00000498187 RWDD1Q9H446 243 aaPredicted RBP25.12■■□□□ 1.61
NKX2-1-202ENST00000498187 UPF2Q9HAU5 1272 aaKnown RBP25.12■■□□□ 1.61
NKX2-1-202ENST00000498187 TERF2IPQ9NYB0 399 aa25.12■■□□□ 1.61
NKX2-1-202ENST00000498187 FYB1O15117 783 aa25.11■■□□□ 1.61
NKX2-1-202ENST00000498187 TMPOP42166 694 aaKnown RBP25.11■■□□□ 1.61
NKX2-1-202ENST00000498187 CD163L1Q9NR16 1453 aa25.11■■□□□ 1.61
NKX2-1-202ENST00000498187 YTHDC2Q9H6S0 1430 aaKnown RBP25.11■■□□□ 1.61
NKX2-1-202ENST00000498187 CT47B1P0C2W7 299 aaPredicted RBP25.11■■□□□ 1.61
NKX2-1-202ENST00000498187 POGKQ9P215 609 aa25.11■■□□□ 1.61
NKX2-1-202ENST00000498187 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
NKX2-1-202ENST00000498187 AGLP35573 1532 aa25.1■■□□□ 1.61
NKX2-1-202ENST00000498187 NLRP1Q9C000 1473 aa25.1■■□□□ 1.61
NKX2-1-202ENST00000498187 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
NKX2-1-202ENST00000498187 TRIM35Q9UPQ4 493 aa25.09■■□□□ 1.61
NKX2-1-202ENST00000498187 MED14O60244 1454 aa25.09■■□□□ 1.61
NKX2-1-202ENST00000498187 EXOSC9Q06265 439 aaKnown RBP25.09■■□□□ 1.61
NKX2-1-202ENST00000498187 DZIP1LQ8IYY4 767 aaKnown RBP25.09■■□□□ 1.61
NKX2-1-202ENST00000498187 SMC4Q9NTJ3 1288 aa25.08■■□□□ 1.61
NKX2-1-202ENST00000498187 TRHP20396 242 aaPredicted RBP25.07■■□□□ 1.6
NKX2-1-202ENST00000498187 ALKQ9UM73 1620 aa25.04■■□□□ 1.6
NKX2-1-202ENST00000498187 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
NKX2-1-202ENST00000498187 HDGFL2Q7Z4V5 671 aaPredicted RBP25.03■■□□□ 1.6
NKX2-1-202ENST00000498187 SSH1Q8WYL5 1049 aa25.03■■□□□ 1.6
NKX2-1-202ENST00000498187 KIF20BQ96Q89 1820 aa25.03■■□□□ 1.6
NKX2-1-202ENST00000498187 DIAPH1O60610 1272 aaKnown RBP25.02■■□□□ 1.6
NKX2-1-202ENST00000498187 TRIM27P14373 513 aa25.02■■□□□ 1.6
NKX2-1-202ENST00000498187 CDK19Q9BWU1 502 aa25.02■■□□□ 1.6
NKX2-1-202ENST00000498187 IL16Q14005 1332 aa25.02■■□□□ 1.6
NKX2-1-202ENST00000498187 RIPK4P57078 832 aa25.02■■□□□ 1.6
NKX2-1-202ENST00000498187 TBC1D32Q96NH3 1257 aa25.02■■□□□ 1.6
NKX2-1-202ENST00000498187 SLKQ9H2G2 1235 aaPredicted RBP25.01■■□□□ 1.59
NKX2-1-202ENST00000498187 ARHGEF40Q8TER5 1519 aa25.01■■□□□ 1.59
NKX2-1-202ENST00000498187 FAM43AQ8N2R8 423 aa25■■□□□ 1.59
NKX2-1-202ENST00000498187 CABP1Q9NZU7 370 aa25■■□□□ 1.59
NKX2-1-202ENST00000498187 PNPLA6Q8IY17 1366 aa24.99■■□□□ 1.59
NKX2-1-202ENST00000498187 ATF7IPQ6VMQ6 1270 aa24.99■■□□□ 1.59
NKX2-1-202ENST00000498187 ANTXR1Q9H6X2 564 aa24.99■■□□□ 1.59
NKX2-1-202ENST00000498187 ITPRIPQ8IWB1 547 aa24.98■■□□□ 1.59
NKX2-1-202ENST00000498187 NOB1Q9ULX3 412 aaKnown RBP24.97■■□□□ 1.59
NKX2-1-202ENST00000498187 DDX19BQ9UMR2 479 aa24.97■■□□□ 1.59
NKX2-1-202ENST00000498187 PNNQ9H307 717 aaKnown RBP24.97■■□□□ 1.59
NKX2-1-202ENST00000498187 STAG3Q9UJ98 1225 aa24.97■■□□□ 1.59
NKX2-1-202ENST00000498187 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.96■■□□□ 1.59
NKX2-1-202ENST00000498187 L1TD1Q5T7N2 865 aaKnown RBP24.95■■□□□ 1.58
NKX2-1-202ENST00000498187 HDAC1Q13547 482 aaPredicted RBP24.95■■□□□ 1.58
NKX2-1-202ENST00000498187 LRRC7Q96NW7 1537 aa24.94■■□□□ 1.58
NKX2-1-202ENST00000498187 TBC1D2Q9BYX2 928 aa24.94■■□□□ 1.58
NKX2-1-202ENST00000498187 CDC42BPGQ6DT37 1551 aa24.94■■□□□ 1.58
NKX2-1-202ENST00000498187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.92■■□□□ 1.58
NKX2-1-202ENST00000498187 TMEM57Q8N5G2 664 aa24.92■■□□□ 1.58
NKX2-1-202ENST00000498187 FCHSD2O94868 740 aa24.92■■□□□ 1.58
NKX2-1-202ENST00000498187 KIF16BQ96L93 1317 aa24.91■■□□□ 1.58
NKX2-1-202ENST00000498187 SPATA31D1Q6ZQQ2 1576 aa24.91■■□□□ 1.58
NKX2-1-202ENST00000498187 FBLN1P23142 703 aa24.9■■□□□ 1.58
NKX2-1-202ENST00000498187 PRKAR2BP31323 418 aa24.89■■□□□ 1.58
NKX2-1-202ENST00000498187 FAM135BQ49AJ0 1406 aa24.89■■□□□ 1.58
NKX2-1-202ENST00000498187 WAPLQ7Z5K2 1190 aa24.89■■□□□ 1.58
NKX2-1-202ENST00000498187 DLC1Q96QB1 1528 aa24.89■■□□□ 1.57
NKX2-1-202ENST00000498187 ATP7BP35670 1465 aa24.89■■□□□ 1.57
NKX2-1-202ENST00000498187 IPO8O15397 1037 aaKnown RBP24.89■■□□□ 1.57
NKX2-1-202ENST00000498187 RSPH6AQ9H0K4 717 aa24.89■■□□□ 1.57
NKX2-1-202ENST00000498187 POLKQ9UBT6 870 aa24.89■■□□□ 1.57
NKX2-1-202ENST00000498187 ZBTB40Q9NUA8 1239 aa24.87■■□□□ 1.57
NKX2-1-202ENST00000498187 ALDH1L2Q3SY69 923 aa24.87■■□□□ 1.57
NKX2-1-202ENST00000498187 SMC5Q8IY18 1101 aa24.87■■□□□ 1.57
NKX2-1-202ENST00000498187 MAP2P11137 1827 aaKnown RBP24.86■■□□□ 1.57
NKX2-1-202ENST00000498187 SETD1AO15047 1707 aaKnown RBP24.86■■□□□ 1.57
NKX2-1-202ENST00000498187 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
NKX2-1-202ENST00000498187 RIMS2Q9UQ26 1411 aa24.83■■□□□ 1.57
NKX2-1-202ENST00000498187 C22orf23Q9BZE7 217 aa24.83■■□□□ 1.57
NKX2-1-202ENST00000498187 HMOX1P09601 288 aa24.82■■□□□ 1.56
NKX2-1-202ENST00000498187 MFAP1P55081 439 aaKnown RBP24.82■■□□□ 1.56
NKX2-1-202ENST00000498187 PHACTR3Q96KR7 559 aa24.82■■□□□ 1.56
NKX2-1-202ENST00000498187 NFE2L2Q16236 605 aa24.81■■□□□ 1.56
NKX2-1-202ENST00000498187 PPIP5K1Q6PFW1 1433 aa24.81■■□□□ 1.56
NKX2-1-202ENST00000498187 MCM4P33991 863 aa24.8■■□□□ 1.56
NKX2-1-202ENST00000498187 CHMP5Q9NZZ3 219 aa24.8■■□□□ 1.56
NKX2-1-202ENST00000498187 EMILIN1Q9Y6C2 1016 aa24.79■■□□□ 1.56
NKX2-1-202ENST00000498187 ZNF428Q96B54 188 aa24.79■■□□□ 1.56
NKX2-1-202ENST00000498187 THUMPD2Q9BTF0 503 aaKnown RBP24.79■■□□□ 1.56
NKX2-1-202ENST00000498187 BRPF1P55201 1214 aaPredicted RBP24.78■■□□□ 1.56
NKX2-1-202ENST00000498187 CPSF1Q10570 1443 aaKnown RBP24.77■■□□□ 1.56
NKX2-1-202ENST00000498187 EDC4Q6P2E9 1401 aaKnown RBP24.77■■□□□ 1.56
NKX2-1-202ENST00000498187 GOLGA6L3A6NEY3 463 aa24.77■■□□□ 1.56
NKX2-1-202ENST00000498187 NUCB1Q02818 461 aa24.77■■□□□ 1.56
NKX2-1-202ENST00000498187 NME9Q86XW9 330 aa24.77■■□□□ 1.56
NKX2-1-202ENST00000498187 WASLO00401 505 aaPredicted RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms