RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 NSD2O96028 1365 aa24.08■■□□□ 1.45
CTDSP1-215ENST00000498160 TRPM3Q9HCF6 1732 aaPredicted RBP24.08■■□□□ 1.45
CTDSP1-215ENST00000498160 NSD3Q9BZ95 1437 aa24.08■■□□□ 1.44
CTDSP1-215ENST00000498160 ARHGEF10O15013 1369 aa24.07■■□□□ 1.44
CTDSP1-215ENST00000498160 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
CTDSP1-215ENST00000498160 TNS3Q68CZ2 1445 aa24.07■■□□□ 1.44
CTDSP1-215ENST00000498160 TTC21BQ7Z4L5 1316 aa24.07■■□□□ 1.44
CTDSP1-215ENST00000498160 FBXO41Q8TF61 875 aa24.06■■□□□ 1.44
CTDSP1-215ENST00000498160 LRRC59Q96AG4 307 aaKnown RBP24.06■■□□□ 1.44
CTDSP1-215ENST00000498160 NPC1L1Q9UHC9 1359 aa24.05■■□□□ 1.44
CTDSP1-215ENST00000498160 COL16A1Q07092 1604 aaPredicted RBP24.03■■□□□ 1.44
CTDSP1-215ENST00000498160 PAK3O75914 559 aaPredicted RBP24.03■■□□□ 1.44
CTDSP1-215ENST00000498160 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
CTDSP1-215ENST00000498160 SPATA31A3Q5VYP0 1347 aa24.03■■□□□ 1.44
CTDSP1-215ENST00000498160 PER1O15534 1290 aaPredicted RBP24.02■■□□□ 1.44
CTDSP1-215ENST00000498160 KIF20BQ96Q89 1820 aa24.02■■□□□ 1.44
CTDSP1-215ENST00000498160 ALS2Q96Q42 1657 aa24.02■■□□□ 1.44
CTDSP1-215ENST00000498160 USP54Q70EL1 1684 aa24■■□□□ 1.43
CTDSP1-215ENST00000498160 ABTB2Q8N961 1025 aa24■■□□□ 1.43
CTDSP1-215ENST00000498160 USP31Q70CQ4 1352 aa24■■□□□ 1.43
CTDSP1-215ENST00000498160 XPCQ01831 940 aaPredicted RBP23.99■■□□□ 1.43
CTDSP1-215ENST00000498160 NLRP13Q86W25 1043 aa23.99■■□□□ 1.43
CTDSP1-215ENST00000498160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.99■■□□□ 1.43
CTDSP1-215ENST00000498160 DDX17Q92841 729 aaKnown RBP23.99■■□□□ 1.43
CTDSP1-215ENST00000498160 PIK3C2AO00443 1686 aa23.97■■□□□ 1.43
CTDSP1-215ENST00000498160 MED1Q15648 1581 aaPredicted RBP23.97■■□□□ 1.43
CTDSP1-215ENST00000498160 ANKRD26Q9UPS8 1709 aa23.97■■□□□ 1.43
CTDSP1-215ENST00000498160 COG3Q96JB2 828 aa23.96■■□□□ 1.43
CTDSP1-215ENST00000498160 JCADQ9P266 1359 aa23.95■■□□□ 1.42
CTDSP1-215ENST00000498160 FYB1O15117 783 aa23.95■■□□□ 1.42
CTDSP1-215ENST00000498160 AMER1Q5JTC6 1135 aaPredicted RBP23.95■■□□□ 1.42
CTDSP1-215ENST00000498160 LMOD2Q6P5Q4 547 aa23.95■■□□□ 1.42
CTDSP1-215ENST00000498160 COL22A1Q8NFW1 1626 aaPredicted RBP23.95■■□□□ 1.42
CTDSP1-215ENST00000498160 NLRP6P59044 892 aa23.94■■□□□ 1.42
CTDSP1-215ENST00000498160 SHPRHQ149N8 1683 aa23.94■■□□□ 1.42
CTDSP1-215ENST00000498160 OVOS2A0A0J9YW53 1432 aa23.93■■□□□ 1.42
CTDSP1-215ENST00000498160 OVOS2Q6IE36 1432 aa23.93■■□□□ 1.42
CTDSP1-215ENST00000498160 NME9Q86XW9 330 aa23.93■■□□□ 1.42
CTDSP1-215ENST00000498160 KCNH5Q8NCM2 988 aa23.92■■□□□ 1.42
CTDSP1-215ENST00000498160 PNPLA6Q8IY17 1366 aa23.91■■□□□ 1.42
CTDSP1-215ENST00000498160 USP19O94966 1318 aa23.91■■□□□ 1.42
CTDSP1-215ENST00000498160 HSPA1LP34931 641 aa23.91■■□□□ 1.42
CTDSP1-215ENST00000498160 SLIT3O75094 1523 aa23.89■■□□□ 1.42
CTDSP1-215ENST00000498160 GGNBP2Q9H3C7 697 aa23.89■■□□□ 1.41
CTDSP1-215ENST00000498160 MORC1Q86VD1 984 aa23.88■■□□□ 1.41
CTDSP1-215ENST00000498160 SPATA31A6Q5VVP1 1343 aa23.87■■□□□ 1.41
CTDSP1-215ENST00000498160 RALBP1Q15311 655 aa23.87■■□□□ 1.41
CTDSP1-215ENST00000498160 PHRF1Q9P1Y6 1649 aaKnown RBP23.85■■□□□ 1.41
CTDSP1-215ENST00000498160 MARF1Q9Y4F3 1742 aaKnown RBP23.85■■□□□ 1.41
CTDSP1-215ENST00000498160 CRYBG1Q9Y4K1 1723 aa23.85■■□□□ 1.41
CTDSP1-215ENST00000498160 HAP1P54257 671 aaPredicted RBP23.85■■□□□ 1.41
CTDSP1-215ENST00000498160 CC2D1BQ5T0F9 858 aaKnown RBP23.85■■□□□ 1.41
CTDSP1-215ENST00000498160 AATKQ6ZMQ8 1374 aa23.85■■□□□ 1.41
CTDSP1-215ENST00000498160 ANP32CO43423 234 aa23.84■■□□□ 1.41
CTDSP1-215ENST00000498160 NUTM2GQ5VZR2 741 aa23.83■■□□□ 1.41
CTDSP1-215ENST00000498160 ABCA3Q99758 1704 aa23.83■■□□□ 1.41
CTDSP1-215ENST00000498160 PARD3Q8TEW0 1356 aa23.82■■□□□ 1.4
CTDSP1-215ENST00000498160 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
CTDSP1-215ENST00000498160 GCP02774 474 aa23.81■■□□□ 1.4
CTDSP1-215ENST00000498160 DIEXFQ68CQ4 756 aaKnown RBP23.81■■□□□ 1.4
CTDSP1-215ENST00000498160 ABCC6O95255 1503 aa23.8■■□□□ 1.4
CTDSP1-215ENST00000498160 NFAT5O94916 1531 aa23.79■■□□□ 1.4
CTDSP1-215ENST00000498160 CPDO75976 1380 aa23.79■■□□□ 1.4
CTDSP1-215ENST00000498160 ZRANB1Q9UGI0 708 aa23.79■■□□□ 1.4
CTDSP1-215ENST00000498160 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
CTDSP1-215ENST00000498160 RTL1A6NKG5 1358 aa23.77■■□□□ 1.4
CTDSP1-215ENST00000498160 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
CTDSP1-215ENST00000498160 SMG6Q86US8 1419 aaKnown RBP23.74■■□□□ 1.39
CTDSP1-215ENST00000498160 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
CTDSP1-215ENST00000498160 ARHGEF25Q86VW2 580 aa23.72■■□□□ 1.39
CTDSP1-215ENST00000498160 MAP2P11137 1827 aaKnown RBP23.71■■□□□ 1.39
CTDSP1-215ENST00000498160 LTN1O94822 1766 aa23.71■■□□□ 1.39
CTDSP1-215ENST00000498160 FLT4P35916 1363 aa23.7■■□□□ 1.38
CTDSP1-215ENST00000498160 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
CTDSP1-215ENST00000498160 CNGB1Q14028 1251 aaPredicted RBP23.7■■□□□ 1.38
CTDSP1-215ENST00000498160 PRDM11Q9NQV5 511 aa23.7■■□□□ 1.38
CTDSP1-215ENST00000498160 COL14A1Q05707 1796 aaKnown RBP23.7■■□□□ 1.38
CTDSP1-215ENST00000498160 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
CTDSP1-215ENST00000498160 BLMP54132 1417 aaPredicted RBP23.69■■□□□ 1.38
CTDSP1-215ENST00000498160 KIAA0232Q92628 1395 aa23.69■■□□□ 1.38
CTDSP1-215ENST00000498160 SOX12O15370 315 aa23.69■■□□□ 1.38
CTDSP1-215ENST00000498160 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
CTDSP1-215ENST00000498160 AMPHP49418 695 aa23.69■■□□□ 1.38
CTDSP1-215ENST00000498160 MAP3K19Q56UN5 1328 aa23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 NUTM2BA6NNL0 878 aaPredicted RBP23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 NUTM2EB1AL46 878 aaPredicted RBP23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 PLEKHG5O94827 1062 aa23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 ZC3H6P61129 1189 aaKnown RBP23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 NUTM2AQ8IVF1 878 aaPredicted RBP23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 CFAP53Q96M91 514 aa23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 POLKQ9UBT6 870 aa23.68■■□□□ 1.38
CTDSP1-215ENST00000498160 RRS1Q15050 365 aaKnown RBP23.66■■□□□ 1.38
CTDSP1-215ENST00000498160 IP6K1Q92551 441 aa23.66■■□□□ 1.38
CTDSP1-215ENST00000498160 INSRP06213 1382 aa23.65■■□□□ 1.38
CTDSP1-215ENST00000498160 MEX3CQ5U5Q3 659 aaKnown RBP23.65■■□□□ 1.38
CTDSP1-215ENST00000498160 MTHFSP49914 203 aa23.64■■□□□ 1.37
CTDSP1-215ENST00000498160 LRP6O75581 1613 aa23.63■■□□□ 1.37
CTDSP1-215ENST00000498160 HOXC9P31274 260 aa23.63■■□□□ 1.37
CTDSP1-215ENST00000498160 NWD2Q9ULI1 1742 aa23.63■■□□□ 1.37
CTDSP1-215ENST00000498160 EMILIN1Q9Y6C2 1016 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms