RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ANKRD36BQ8N2N9 1353 aa16.37■□□□□ 0.21
AFF3-215ENST00000498090 ANKARQ7Z5J8 1434 aa16.37■□□□□ 0.21
AFF3-215ENST00000498090 TCERG1O14776 1098 aaKnown RBP16.36■□□□□ 0.21
AFF3-215ENST00000498090 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
AFF3-215ENST00000498090 CARD14Q9BXL6 1004 aa16.36■□□□□ 0.21
AFF3-215ENST00000498090 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
AFF3-215ENST00000498090 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
AFF3-215ENST00000498090 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
AFF3-215ENST00000498090 PPP2R1AP30153 589 aa16.34■□□□□ 0.21
AFF3-215ENST00000498090 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
AFF3-215ENST00000498090 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
AFF3-215ENST00000498090 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
AFF3-215ENST00000498090 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.21
AFF3-215ENST00000498090 MS4A1P11836 297 aa16.33■□□□□ 0.2
AFF3-215ENST00000498090 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
AFF3-215ENST00000498090 DCCP43146 1447 aa16.33■□□□□ 0.2
AFF3-215ENST00000498090 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
AFF3-215ENST00000498090 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
AFF3-215ENST00000498090 ITSN1Q15811 1721 aa16.32■□□□□ 0.2
AFF3-215ENST00000498090 RGPD8O14715 1765 aaPredicted RBP16.32■□□□□ 0.2
AFF3-215ENST00000498090 PLEKHG3A1L390 1219 aa16.3■□□□□ 0.2
AFF3-215ENST00000498090 MST1RQ04912 1400 aa16.3■□□□□ 0.2
AFF3-215ENST00000498090 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
AFF3-215ENST00000498090 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
AFF3-215ENST00000498090 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
AFF3-215ENST00000498090 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
AFF3-215ENST00000498090 MSH6P52701 1360 aa16.29■□□□□ 0.2
AFF3-215ENST00000498090 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
AFF3-215ENST00000498090 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
AFF3-215ENST00000498090 AKAP12Q02952 1782 aa16.29■□□□□ 0.2
AFF3-215ENST00000498090 MON2Q7Z3U7 1717 aa16.28■□□□□ 0.2
AFF3-215ENST00000498090 CDCA7LQ96GN5 454 aa16.28■□□□□ 0.2
AFF3-215ENST00000498090 POLR3AO14802 1390 aaPredicted RBP16.28■□□□□ 0.2
AFF3-215ENST00000498090 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
AFF3-215ENST00000498090 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
AFF3-215ENST00000498090 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
AFF3-215ENST00000498090 NRKQ7Z2Y5 1582 aa16.27■□□□□ 0.2
AFF3-215ENST00000498090 ACEP12821 1306 aa16.27■□□□□ 0.19
AFF3-215ENST00000498090 ZNF521Q96K83 1311 aa16.27■□□□□ 0.19
AFF3-215ENST00000498090 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.19
AFF3-215ENST00000498090 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.19
AFF3-215ENST00000498090 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
AFF3-215ENST00000498090 ATF3P18847 181 aa16.25■□□□□ 0.19
AFF3-215ENST00000498090 USP6P35125 1406 aa16.25■□□□□ 0.19
AFF3-215ENST00000498090 EDC4Q6P2E9 1401 aaKnown RBP16.25■□□□□ 0.19
AFF3-215ENST00000498090 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
AFF3-215ENST00000498090 CADPS2Q86UW7 1296 aa16.24■□□□□ 0.19
AFF3-215ENST00000498090 ORAI2Q96SN7 254 aa16.24■□□□□ 0.19
AFF3-215ENST00000498090 PHF8Q9UPP1 1060 aa16.24■□□□□ 0.19
AFF3-215ENST00000498090 SSH2Q76I76 1423 aa16.24■□□□□ 0.19
AFF3-215ENST00000498090 TOM1O60784 492 aa16.24■□□□□ 0.19
AFF3-215ENST00000498090 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
AFF3-215ENST00000498090 DUSP27Q5VZP5 1158 aa16.22■□□□□ 0.19
AFF3-215ENST00000498090 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
AFF3-215ENST00000498090 PIP4K2BP78356 416 aa16.21■□□□□ 0.19
AFF3-215ENST00000498090 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
AFF3-215ENST00000498090 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
AFF3-215ENST00000498090 KIF1AQ12756 1690 aa16.21■□□□□ 0.19
AFF3-215ENST00000498090 KIF20BQ96Q89 1820 aa16.2■□□□□ 0.18
AFF3-215ENST00000498090 NSD2O96028 1365 aa16.2■□□□□ 0.18
AFF3-215ENST00000498090 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.18
AFF3-215ENST00000498090 TRMT2AQ8IZ69 625 aaKnown RBP16.2■□□□□ 0.18
AFF3-215ENST00000498090 TTC21BQ7Z4L5 1316 aa16.19■□□□□ 0.18
AFF3-215ENST00000498090 FYB1O15117 783 aa16.19■□□□□ 0.18
AFF3-215ENST00000498090 SLFN5Q08AF3 891 aa16.19■□□□□ 0.18
AFF3-215ENST00000498090 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
AFF3-215ENST00000498090 NME9Q86XW9 330 aa16.18■□□□□ 0.18
AFF3-215ENST00000498090 CRBNQ96SW2 442 aa16.18■□□□□ 0.18
AFF3-215ENST00000498090 GGNBP2Q9H3C7 697 aa16.18■□□□□ 0.18
AFF3-215ENST00000498090 BACH2Q9BYV9 841 aa16.18■□□□□ 0.18
AFF3-215ENST00000498090 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
AFF3-215ENST00000498090 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
AFF3-215ENST00000498090 E9PSI1 815 aa16.17■□□□□ 0.18
AFF3-215ENST00000498090 PDE4AP27815 886 aa16.17■□□□□ 0.18
AFF3-215ENST00000498090 CENPQQ7L2Z9 268 aaPredicted RBP16.17■□□□□ 0.18
AFF3-215ENST00000498090 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
AFF3-215ENST00000498090 SLAIN2Q9P270 581 aa16.16■□□□□ 0.18
AFF3-215ENST00000498090 PIK3C2AO00443 1686 aa16.16■□□□□ 0.18
AFF3-215ENST00000498090 FOXO3O43524 673 aa16.15■□□□□ 0.18
AFF3-215ENST00000498090 OVOS2A0A0J9YW53 1432 aa16.15■□□□□ 0.18
AFF3-215ENST00000498090 OVOS2Q6IE36 1432 aa16.15■□□□□ 0.18
AFF3-215ENST00000498090 TRPM3Q9HCF6 1732 aaPredicted RBP16.15■□□□□ 0.18
AFF3-215ENST00000498090 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.18
AFF3-215ENST00000498090 MORC1Q86VD1 984 aa16.14■□□□□ 0.18
AFF3-215ENST00000498090 DDX17Q92841 729 aaKnown RBP16.14■□□□□ 0.18
AFF3-215ENST00000498090 TTC21AQ8NDW8 1320 aa16.14■□□□□ 0.17
AFF3-215ENST00000498090 PLIN1O60240 522 aa16.14■□□□□ 0.17
AFF3-215ENST00000498090 HSPA1LP34931 641 aa16.14■□□□□ 0.17
AFF3-215ENST00000498090 XPCQ01831 940 aaPredicted RBP16.14■□□□□ 0.17
AFF3-215ENST00000498090 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
AFF3-215ENST00000498090 PXDNQ92626 1479 aa16.12■□□□□ 0.17
AFF3-215ENST00000498090 MARF1Q9Y4F3 1742 aaKnown RBP16.12■□□□□ 0.17
AFF3-215ENST00000498090 PSME1Q06323 249 aa16.11■□□□□ 0.17
AFF3-215ENST00000498090 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
AFF3-215ENST00000498090 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
AFF3-215ENST00000498090 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
AFF3-215ENST00000498090 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
AFF3-215ENST00000498090 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
AFF3-215ENST00000498090 NPHP3Q7Z494 1330 aa16.09■□□□□ 0.17
AFF3-215ENST00000498090 APAF1O14727 1248 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms