RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 WAPLQ7Z5K2 1190 aa16.56■□□□□ 0.24
NXF3-207ENST00000497850 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
NXF3-207ENST00000497850 CDK19Q9BWU1 502 aa16.56■□□□□ 0.24
NXF3-207ENST00000497850 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
NXF3-207ENST00000497850 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
NXF3-207ENST00000497850 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
NXF3-207ENST00000497850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
NXF3-207ENST00000497850 CLTCQ00610 1675 aaKnown RBP16.54■□□□□ 0.24
NXF3-207ENST00000497850 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
NXF3-207ENST00000497850 ATAD2Q6PL18 1390 aa16.52■□□□□ 0.24
NXF3-207ENST00000497850 CCDC27Q2M243 656 aa16.52■□□□□ 0.23
NXF3-207ENST00000497850 MYH16Q9H6N6 1097 aa16.51■□□□□ 0.23
NXF3-207ENST00000497850 ADGRB2O60241 1585 aa16.51■□□□□ 0.23
NXF3-207ENST00000497850 DIP2BQ9P265 1576 aa16.51■□□□□ 0.23
NXF3-207ENST00000497850 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
NXF3-207ENST00000497850 PCDHB15Q9Y5E8 787 aa16.5■□□□□ 0.23
NXF3-207ENST00000497850 TMPOP42166 694 aaKnown RBP16.5■□□□□ 0.23
NXF3-207ENST00000497850 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
NXF3-207ENST00000497850 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
NXF3-207ENST00000497850 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
NXF3-207ENST00000497850 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
NXF3-207ENST00000497850 MAPK8IP3Q9UPT6 1336 aa16.5■□□□□ 0.23
NXF3-207ENST00000497850 COL3A1P02461 1466 aaPredicted RBP16.5■□□□□ 0.23
NXF3-207ENST00000497850 NINLQ9Y2I6 1382 aa16.49■□□□□ 0.23
NXF3-207ENST00000497850 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
NXF3-207ENST00000497850 ANKRD26Q9UPS8 1709 aa16.49■□□□□ 0.23
NXF3-207ENST00000497850 RRP9O43818 475 aaKnown RBP16.49■□□□□ 0.23
NXF3-207ENST00000497850 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
NXF3-207ENST00000497850 NLRP1Q9C000 1473 aa16.49■□□□□ 0.23
NXF3-207ENST00000497850 L1TD1Q5T7N2 865 aaKnown RBP16.48■□□□□ 0.23
NXF3-207ENST00000497850 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
NXF3-207ENST00000497850 VIRMAQ69YN4 1812 aaKnown RBP16.47■□□□□ 0.23
NXF3-207ENST00000497850 HSP90AA2PQ14568 343 aaPredicted RBP16.47■□□□□ 0.23
NXF3-207ENST00000497850 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
NXF3-207ENST00000497850 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
NXF3-207ENST00000497850 RIPK4P57078 832 aa16.47■□□□□ 0.23
NXF3-207ENST00000497850 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.23
NXF3-207ENST00000497850 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
NXF3-207ENST00000497850 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
NXF3-207ENST00000497850 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
NXF3-207ENST00000497850 SEC24BO95487 1268 aa16.45■□□□□ 0.22
NXF3-207ENST00000497850 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
NXF3-207ENST00000497850 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
NXF3-207ENST00000497850 CLCN1P35523 988 aa16.44■□□□□ 0.22
NXF3-207ENST00000497850 ZRANB1Q9UGI0 708 aa16.44■□□□□ 0.22
NXF3-207ENST00000497850 HSP90AA1P07900 732 aaKnown RBP16.43■□□□□ 0.22
NXF3-207ENST00000497850 ZKSCAN2Q63HK3 967 aa16.43■□□□□ 0.22
NXF3-207ENST00000497850 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
NXF3-207ENST00000497850 PNNQ9H307 717 aaKnown RBP16.43■□□□□ 0.22
NXF3-207ENST00000497850 HMOX1P09601 288 aa16.43■□□□□ 0.22
NXF3-207ENST00000497850 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
NXF3-207ENST00000497850 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
NXF3-207ENST00000497850 PDZRN3Q9UPQ7 1066 aa16.43■□□□□ 0.22
NXF3-207ENST00000497850 MVPQ14764 893 aaKnown RBP16.42■□□□□ 0.22
NXF3-207ENST00000497850 DZIP1LQ8IYY4 767 aaKnown RBP16.42■□□□□ 0.22
NXF3-207ENST00000497850 MAP2P11137 1827 aaKnown RBP16.41■□□□□ 0.22
NXF3-207ENST00000497850 SETD1AO15047 1707 aaKnown RBP16.41■□□□□ 0.22
NXF3-207ENST00000497850 PRKAR2BP31323 418 aa16.41■□□□□ 0.22
NXF3-207ENST00000497850 POLKQ9UBT6 870 aa16.41■□□□□ 0.22
NXF3-207ENST00000497850 EMILIN1Q9Y6C2 1016 aa16.41■□□□□ 0.22
NXF3-207ENST00000497850 TRIM27P14373 513 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 NME9Q86XW9 330 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 MED14O60244 1454 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 METP08581 1390 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 USP19O94966 1318 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
NXF3-207ENST00000497850 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
NXF3-207ENST00000497850 SPATA31D1Q6ZQQ2 1576 aa16.4■□□□□ 0.22
NXF3-207ENST00000497850 PHACTR3Q96KR7 559 aa16.38■□□□□ 0.21
NXF3-207ENST00000497850 AGLP35573 1532 aa16.38■□□□□ 0.21
NXF3-207ENST00000497850 XRCC6P12956 609 aaKnown RBP eCLIP16.38■□□□□ 0.21
NXF3-207ENST00000497850 RWDD1Q9H446 243 aaPredicted RBP16.38■□□□□ 0.21
NXF3-207ENST00000497850 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
NXF3-207ENST00000497850 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
NXF3-207ENST00000497850 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
NXF3-207ENST00000497850 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
NXF3-207ENST00000497850 FSD2A1L4K1 749 aa16.36■□□□□ 0.21
NXF3-207ENST00000497850 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
NXF3-207ENST00000497850 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
NXF3-207ENST00000497850 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
NXF3-207ENST00000497850 TMEM57Q8N5G2 664 aa16.36■□□□□ 0.21
NXF3-207ENST00000497850 REREQ9P2R6 1566 aa16.36■□□□□ 0.21
NXF3-207ENST00000497850 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
NXF3-207ENST00000497850 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
NXF3-207ENST00000497850 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
NXF3-207ENST00000497850 ATP7BP35670 1465 aa16.35■□□□□ 0.21
NXF3-207ENST00000497850 FCHSD2O94868 740 aa16.34■□□□□ 0.21
NXF3-207ENST00000497850 NUDT16Q96DE0 195 aaKnown RBP16.34■□□□□ 0.21
NXF3-207ENST00000497850 ZMYM3Q14202 1370 aa16.34■□□□□ 0.21
NXF3-207ENST00000497850 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
NXF3-207ENST00000497850 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
NXF3-207ENST00000497850 ANTXR1Q9H6X2 564 aa16.34■□□□□ 0.21
NXF3-207ENST00000497850 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
NXF3-207ENST00000497850 FAM135BQ49AJ0 1406 aa16.33■□□□□ 0.21
NXF3-207ENST00000497850 PANK2Q9BZ23 570 aa16.33■□□□□ 0.2
NXF3-207ENST00000497850 IL16Q14005 1332 aa16.33■□□□□ 0.2
NXF3-207ENST00000497850 AAMPQ13685 434 aa16.33■□□□□ 0.2
NXF3-207ENST00000497850 CPS1P31327 1500 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms