RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 SAFB2Q14151 953 aaKnown RBP eCLIP22.42■■□□□ 1.18
TNRC18-210ENST00000497663 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
TNRC18-210ENST00000497663 COL22A1Q8NFW1 1626 aaPredicted RBP22.41■■□□□ 1.18
TNRC18-210ENST00000497663 NPHP3Q7Z494 1330 aa22.4■■□□□ 1.18
TNRC18-210ENST00000497663 C19orf67A6NJJ6 358 aa22.4■■□□□ 1.18
TNRC18-210ENST00000497663 RBM6P78332 1123 aaKnown RBP22.4■■□□□ 1.18
TNRC18-210ENST00000497663 HAX1O00165 279 aa22.39■■□□□ 1.17
TNRC18-210ENST00000497663 USP21Q9UK80 565 aa22.39■■□□□ 1.17
TNRC18-210ENST00000497663 FMN2Q9NZ56 1722 aa22.39■■□□□ 1.17
TNRC18-210ENST00000497663 FNBP4Q8N3X1 1017 aaPredicted RBP22.38■■□□□ 1.17
TNRC18-210ENST00000497663 PRAM1Q96QH2 718 aa22.38■■□□□ 1.17
TNRC18-210ENST00000497663 SIRT1Q96EB6 747 aa22.36■■□□□ 1.17
TNRC18-210ENST00000497663 BCL9LQ86UU0 1499 aa22.35■■□□□ 1.17
TNRC18-210ENST00000497663 ZRANB1Q9UGI0 708 aa22.35■■□□□ 1.17
TNRC18-210ENST00000497663 ATRNO75882 1429 aa22.34■■□□□ 1.17
TNRC18-210ENST00000497663 KDM2AQ9Y2K7 1162 aa22.34■■□□□ 1.17
TNRC18-210ENST00000497663 ADGRB1O14514 1584 aa22.33■■□□□ 1.17
TNRC18-210ENST00000497663 SPATA31A3Q5VYP0 1347 aa22.33■■□□□ 1.17
TNRC18-210ENST00000497663 RGPD8O14715 1765 aaPredicted RBP22.33■■□□□ 1.17
TNRC18-210ENST00000497663 DHX57Q6P158 1386 aaKnown RBP22.33■■□□□ 1.17
TNRC18-210ENST00000497663 ECM2O94769 699 aaPredicted RBP22.32■■□□□ 1.16
TNRC18-210ENST00000497663 KRT28Q7Z3Y7 464 aa22.32■■□□□ 1.16
TNRC18-210ENST00000497663 CABLES1Q8TDN4 633 aa22.31■■□□□ 1.16
TNRC18-210ENST00000497663 HIRIP3Q9BW71 556 aaPredicted RBP22.31■■□□□ 1.16
TNRC18-210ENST00000497663 TRPC5Q9UL62 973 aaPredicted RBP22.31■■□□□ 1.16
TNRC18-210ENST00000497663 PHF8Q9UPP1 1060 aa22.31■■□□□ 1.16
TNRC18-210ENST00000497663 TRAK1Q9UPV9 953 aa22.3■■□□□ 1.16
TNRC18-210ENST00000497663 USP32Q8NFA0 1604 aa22.29■■□□□ 1.16
TNRC18-210ENST00000497663 DCAF11Q8TEB1 546 aa22.29■■□□□ 1.16
TNRC18-210ENST00000497663 PMFBP1Q8TBY8 1022 aa22.28■■□□□ 1.16
TNRC18-210ENST00000497663 CCDC61Q9Y6R9 512 aa22.28■■□□□ 1.16
TNRC18-210ENST00000497663 PRR36Q9H6K5 1346 aa22.27■■□□□ 1.16
TNRC18-210ENST00000497663 POGKQ9P215 609 aa22.26■■□□□ 1.15
TNRC18-210ENST00000497663 KIF1AQ12756 1690 aa22.26■■□□□ 1.15
TNRC18-210ENST00000497663 MINK1Q8N4C8 1332 aaPredicted RBP22.26■■□□□ 1.15
TNRC18-210ENST00000497663 DLC1Q96QB1 1528 aa22.26■■□□□ 1.15
TNRC18-210ENST00000497663 MARF1Q9Y4F3 1742 aaKnown RBP22.25■■□□□ 1.15
TNRC18-210ENST00000497663 ACIN1Q9UKV3 1341 aaKnown RBP22.25■■□□□ 1.15
TNRC18-210ENST00000497663 EP400Q96L91 3159 aa22.24■■□□□ 1.15
TNRC18-210ENST00000497663 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
TNRC18-210ENST00000497663 SLIT2O94813 1529 aa22.23■■□□□ 1.15
TNRC18-210ENST00000497663 PYGBP11216 843 aa22.22■■□□□ 1.15
TNRC18-210ENST00000497663 GJD4Q96KN9 370 aaPredicted RBP22.22■■□□□ 1.15
TNRC18-210ENST00000497663 LMOD2Q6P5Q4 547 aa22.2■■□□□ 1.14
TNRC18-210ENST00000497663 UNC5CLQ8IV45 518 aa22.2■■□□□ 1.14
TNRC18-210ENST00000497663 ADGRB2O60241 1585 aa22.2■■□□□ 1.14
TNRC18-210ENST00000497663 GLI3P10071 1580 aa22.2■■□□□ 1.14
TNRC18-210ENST00000497663 SRCAPQ6ZRS2 3230 aa22.19■■□□□ 1.14
TNRC18-210ENST00000497663 PSME1Q06323 249 aa22.19■■□□□ 1.14
TNRC18-210ENST00000497663 RALGAPBQ86X10 1494 aa22.19■■□□□ 1.14
TNRC18-210ENST00000497663 SBNO1A3KN83 1393 aa22.18■■□□□ 1.14
TNRC18-210ENST00000497663 CHRM1P11229 460 aaPredicted RBP22.18■■□□□ 1.14
TNRC18-210ENST00000497663 HRCP23327 699 aa22.18■■□□□ 1.14
TNRC18-210ENST00000497663 ANKARQ7Z5J8 1434 aa22.17■■□□□ 1.14
TNRC18-210ENST00000497663 ATAD2Q6PL18 1390 aa22.17■■□□□ 1.14
TNRC18-210ENST00000497663 FAM83GA6ND36 823 aa22.16■■□□□ 1.14
TNRC18-210ENST00000497663 ZNF579Q8NAF0 562 aaKnown RBP22.16■■□□□ 1.14
TNRC18-210ENST00000497663 WASLO00401 505 aaPredicted RBP22.15■■□□□ 1.14
TNRC18-210ENST00000497663 ABCA3Q99758 1704 aa22.14■■□□□ 1.14
TNRC18-210ENST00000497663 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.13
TNRC18-210ENST00000497663 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.13■■□□□ 1.13
TNRC18-210ENST00000497663 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
TNRC18-210ENST00000497663 HAP1P54257 671 aaPredicted RBP22.12■■□□□ 1.13
TNRC18-210ENST00000497663 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
TNRC18-210ENST00000497663 PHF12Q96QT6 1004 aa22.11■■□□□ 1.13
TNRC18-210ENST00000497663 ARHGEF28Q8N1W1 1705 aaKnown RBP22.1■■□□□ 1.13
TNRC18-210ENST00000497663 PLCH1Q4KWH8 1693 aa22.1■■□□□ 1.13
TNRC18-210ENST00000497663 ARHGEF10O15013 1369 aa22.1■■□□□ 1.13
TNRC18-210ENST00000497663 EVX2Q03828 476 aa22.09■■□□□ 1.13
TNRC18-210ENST00000497663 VPS72Q15906 364 aa22.09■■□□□ 1.13
TNRC18-210ENST00000497663 ALS2Q96Q42 1657 aa22.08■■□□□ 1.13
TNRC18-210ENST00000497663 SEPT12Q8IYM1 358 aa22.08■■□□□ 1.13
TNRC18-210ENST00000497663 ATP7BP35670 1465 aa22.08■■□□□ 1.12
TNRC18-210ENST00000497663 NUDT16Q96DE0 195 aaKnown RBP22.07■■□□□ 1.12
TNRC18-210ENST00000497663 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
TNRC18-210ENST00000497663 RGL2O15211 777 aa22.06■■□□□ 1.12
TNRC18-210ENST00000497663 NGDNQ8NEJ9 315 aaKnown RBP22.06■■□□□ 1.12
TNRC18-210ENST00000497663 KIF12Q96FN5 646 aa22.06■■□□□ 1.12
TNRC18-210ENST00000497663 CDK19Q9BWU1 502 aa22.06■■□□□ 1.12
TNRC18-210ENST00000497663 GPRASP1Q5JY77 1395 aa22.04■■□□□ 1.12
TNRC18-210ENST00000497663 STAC3Q96MF2 364 aa22.04■■□□□ 1.12
TNRC18-210ENST00000497663 BTG4Q9NY30 223 aa22.04■■□□□ 1.12
TNRC18-210ENST00000497663 CCDC9Q9Y3X0 531 aaKnown RBP22.04■■□□□ 1.12
TNRC18-210ENST00000497663 ONECUT3O60422 494 aaPredicted RBP22.02■■□□□ 1.12
TNRC18-210ENST00000497663 NUTM2GQ5VZR2 741 aa22.02■■□□□ 1.12
TNRC18-210ENST00000497663 DEFB132Q7Z7B7 95 aa22.02■■□□□ 1.12
TNRC18-210ENST00000497663 NRAPQ86VF7 1730 aa22.02■■□□□ 1.12
TNRC18-210ENST00000497663 CRYBG1Q9Y4K1 1723 aa22.02■■□□□ 1.12
TNRC18-210ENST00000497663 NWD2Q9ULI1 1742 aa22.01■■□□□ 1.11
TNRC18-210ENST00000497663 PCDHB13Q9Y5F0 798 aa22.01■■□□□ 1.11
TNRC18-210ENST00000497663 EIF3AQ14152 1382 aaKnown RBP22■■□□□ 1.11
TNRC18-210ENST00000497663 MAP3K13O43283 966 aa22■■□□□ 1.11
TNRC18-210ENST00000497663 FAM98CQ17RN3 349 aaKnown RBP21.99■■□□□ 1.11
TNRC18-210ENST00000497663 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
TNRC18-210ENST00000497663 SGIP1Q9BQI5 828 aa21.99■■□□□ 1.11
TNRC18-210ENST00000497663 RIOK3O14730 519 aaKnown RBP21.98■■□□□ 1.11
TNRC18-210ENST00000497663 CHRNA2Q15822 529 aa21.98■■□□□ 1.11
TNRC18-210ENST00000497663 FAM182BQ5T319 152 aa21.98■■□□□ 1.11
TNRC18-210ENST00000497663 ZNF467Q7Z7K2 595 aaPredicted RBP21.98■■□□□ 1.11
TNRC18-210ENST00000497663 ACEP12821 1306 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms