RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 DNAJB2P25686 324 aa8.9□□□□□ -0.98
BRCA1-224ENST00000497488 FOSBP53539 338 aa8.9□□□□□ -0.98
BRCA1-224ENST00000497488 TAGLNQ01995 201 aaKnown RBP8.9□□□□□ -0.98
BRCA1-224ENST00000497488 MTMR2Q13614 643 aa8.9□□□□□ -0.98
BRCA1-224ENST00000497488 GPR153Q6NV75 609 aa8.9□□□□□ -0.98
BRCA1-224ENST00000497488 SLF2Q8IX21 1173 aa8.9□□□□□ -0.98
BRCA1-224ENST00000497488 FAM198AQ9UFP1 575 aa8.9□□□□□ -0.98
BRCA1-224ENST00000497488 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
BRCA1-224ENST00000497488 CFAP99D6REC4 459 aa8.89□□□□□ -0.99
BRCA1-224ENST00000497488 GIMAP6Q6P9H5 292 aa8.89□□□□□ -0.99
BRCA1-224ENST00000497488 DHX37Q8IY37 1157 aaKnown RBP8.89□□□□□ -0.99
BRCA1-224ENST00000497488 FAM200AQ8TCP9 573 aa8.89□□□□□ -0.99
BRCA1-224ENST00000497488 MARVELD3Q96A59 401 aa8.89□□□□□ -0.99
BRCA1-224ENST00000497488 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-224ENST00000497488 ZC3H4Q9UPT8 1303 aaKnown RBP8.88□□□□□ -0.99
BRCA1-224ENST00000497488 POTEMA6NI47 508 aa8.88□□□□□ -0.99
BRCA1-224ENST00000497488 HOXB1P14653 301 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-224ENST00000497488 ERCC5P28715 1186 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-224ENST00000497488 PTK7Q13308 1070 aa8.88□□□□□ -0.99
BRCA1-224ENST00000497488 NR6A1Q15406 480 aa8.88□□□□□ -0.99
BRCA1-224ENST00000497488 POTEGQ6S5H5 508 aa8.88□□□□□ -0.99
BRCA1-224ENST00000497488 RDH13Q8NBN7 331 aa8.88□□□□□ -0.99
BRCA1-224ENST00000497488 KHSRPQ92945 711 aaKnown RBP eCLIP8.88□□□□□ -0.99
BRCA1-224ENST00000497488 CDCA7Q9BWT1 371 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-224ENST00000497488 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
BRCA1-224ENST00000497488 SKIP12755 728 aa8.87□□□□□ -0.99
BRCA1-224ENST00000497488 NR1H3Q13133 447 aa8.87□□□□□ -0.99
BRCA1-224ENST00000497488 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
BRCA1-224ENST00000497488 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
BRCA1-224ENST00000497488 C1orf216Q8TAB5 229 aa8.87□□□□□ -0.99
BRCA1-224ENST00000497488 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
BRCA1-224ENST00000497488 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
BRCA1-224ENST00000497488 KDM4FA0A1W2PPD8 638 aa8.86□□□□□ -0.99
BRCA1-224ENST00000497488 SCNN1AP37088 669 aa8.86□□□□□ -0.99
BRCA1-224ENST00000497488 GUCA2AQ02747 115 aa8.86□□□□□ -0.99
BRCA1-224ENST00000497488 LARP1Q6PKG0 1096 aaKnown RBP8.86□□□□□ -0.99
BRCA1-224ENST00000497488 DPH6Q7L8W6 267 aa8.86□□□□□ -0.99
BRCA1-224ENST00000497488 MKRN1Q9UHC7 482 aaKnown RBP8.86□□□□□ -0.99
BRCA1-224ENST00000497488 EGFL7Q9UHF1 273 aa8.86□□□□□ -0.99
BRCA1-224ENST00000497488 PCDHGA4Q9Y5G9 962 aa8.86□□□□□ -0.99
BRCA1-224ENST00000497488 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
BRCA1-224ENST00000497488 GCGRP47871 477 aa8.85□□□□□ -0.99
BRCA1-224ENST00000497488 DEPDC4Q8N2C3 294 aa8.85□□□□□ -0.99
BRCA1-224ENST00000497488 BCL11AQ9H165 835 aa8.85□□□□□ -0.99
BRCA1-224ENST00000497488 RASA1P20936 1047 aa8.84□□□□□ -0.99
BRCA1-224ENST00000497488 SWI5Q1ZZU3 235 aa8.84□□□□□ -0.99
BRCA1-224ENST00000497488 HLA-CQ95604 372 aa8.84□□□□□ -0.99
BRCA1-224ENST00000497488 ASB16Q96NS5 453 aa8.84□□□□□ -0.99
BRCA1-224ENST00000497488 POTEB3A0JP26 581 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 LZTS3O60299 673 aaPredicted RBP8.83□□□□□ -1
BRCA1-224ENST00000497488 EMP3P54852 163 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 COL19A1Q14993 1142 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 POTEBQ6S5H4 581 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 NUDT18Q6ZVK8 323 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 ANKMY2Q8IV38 441 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 FAM174AQ8TBP5 190 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 ADAM33Q9BZ11 813 aa8.83□□□□□ -1
BRCA1-224ENST00000497488 HDLBPQ00341 1268 aaKnown RBP8.82□□□□□ -1
BRCA1-224ENST00000497488 ZNF454Q8N9F8 522 aa8.82□□□□□ -1
BRCA1-224ENST00000497488 BACH2Q9BYV9 841 aa8.82□□□□□ -1
BRCA1-224ENST00000497488 C3orf80F5H4A9 247 aa8.81□□□□□ -1
BRCA1-224ENST00000497488 ATP5J2-PTCD1G3V325 749 aa8.81□□□□□ -1
BRCA1-224ENST00000497488 H3BRB1 525 aa8.81□□□□□ -1
BRCA1-224ENST00000497488 NUDT7P0C024 238 aa8.81□□□□□ -1
BRCA1-224ENST00000497488 FBXO45P0C2W1 286 aa8.81□□□□□ -1
BRCA1-224ENST00000497488 BRD2P25440 801 aaKnown RBP8.81□□□□□ -1
BRCA1-224ENST00000497488 MAPK1P28482 360 aa8.81□□□□□ -1
BRCA1-224ENST00000497488 NOP9Q86U38 636 aaKnown RBP8.81□□□□□ -1
BRCA1-224ENST00000497488 PIK3R5Q8WYR1 880 aa8.81□□□□□ -1
BRCA1-224ENST00000497488 TUT1Q9H6E5 874 aaKnown RBP8.81□□□□□ -1
BRCA1-224ENST00000497488 PPP1R3GB7ZBB8 358 aa8.8□□□□□ -1
BRCA1-224ENST00000497488 SCAMP3O14828 347 aaKnown RBP8.8□□□□□ -1
BRCA1-224ENST00000497488 ICMTO60725 284 aa8.8□□□□□ -1
BRCA1-224ENST00000497488 ABL1P00519 1130 aa8.8□□□□□ -1
BRCA1-224ENST00000497488 ZNF662Q6ZS27 426 aa8.8□□□□□ -1
BRCA1-224ENST00000497488 FAM205CA6NFA0 338 aa8.79□□□□□ -1
BRCA1-224ENST00000497488 NBPF26B4DH59 902 aa8.79□□□□□ -1
BRCA1-224ENST00000497488 C6orf229H3BNL8 230 aa8.79□□□□□ -1
BRCA1-224ENST00000497488 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
BRCA1-224ENST00000497488 ZNF211Q13398 564 aaPredicted RBP8.79□□□□□ -1
BRCA1-224ENST00000497488 NCOA4Q13772 614 aa8.79□□□□□ -1
BRCA1-224ENST00000497488 MRPL58Q14197 206 aaKnown RBP8.79□□□□□ -1
BRCA1-224ENST00000497488 ZSCAN29Q8IWY8 852 aaPredicted RBP8.79□□□□□ -1
BRCA1-224ENST00000497488 TSKSQ9UJT2 592 aa8.79□□□□□ -1
BRCA1-224ENST00000497488 DCTN4Q9UJW0 460 aa8.79□□□□□ -1
BRCA1-224ENST00000497488 ARID4BQ4LE39 1312 aaPredicted RBP8.79□□□□□ -1
BRCA1-224ENST00000497488 ZBBXA8MT70 800 aa8.78□□□□□ -1
BRCA1-224ENST00000497488 DPYDQ12882 1025 aa8.78□□□□□ -1
BRCA1-224ENST00000497488 EAPPQ56P03 285 aaPredicted RBP8.78□□□□□ -1
BRCA1-224ENST00000497488 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
BRCA1-224ENST00000497488 RNF135Q8IUD6 432 aa8.78□□□□□ -1
BRCA1-224ENST00000497488 GLYCTKQ8IVS8 523 aa8.78□□□□□ -1
BRCA1-224ENST00000497488 HS3ST6Q96QI5 342 aa8.78□□□□□ -1
BRCA1-224ENST00000497488 RAD51AP2Q09MP3 1159 aa8.77□□□□□ -1.01
BRCA1-224ENST00000497488 C9orf131Q5VYM1 1079 aa8.77□□□□□ -1.01
BRCA1-224ENST00000497488 TATDN2Q93075 761 aa8.77□□□□□ -1.01
BRCA1-224ENST00000497488 TANGO6Q9C0B7 1094 aa8.77□□□□□ -1.01
BRCA1-224ENST00000497488 LNPKQ9C0E8 428 aa8.77□□□□□ -1.01
BRCA1-224ENST00000497488 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
BRCA1-224ENST00000497488 CUEDC1Q9NWM3 386 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms