RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 MROH1Q8NDA8 1641 aa9.91□□□□□ -0.82
HOXA9-206ENST00000497089 PLA2R1Q13018 1463 aa9.91□□□□□ -0.82
HOXA9-206ENST00000497089 FBXO41Q8TF61 875 aa9.9□□□□□ -0.82
HOXA9-206ENST00000497089 HS3ST6Q96QI5 342 aa9.9□□□□□ -0.82
HOXA9-206ENST00000497089 PCGF6Q9BYE7 350 aa9.9□□□□□ -0.82
HOXA9-206ENST00000497089 BCL2L12Q9HB09 334 aa9.9□□□□□ -0.82
HOXA9-206ENST00000497089 CAMSAP1Q5T5Y3 1602 aa9.9□□□□□ -0.82
HOXA9-206ENST00000497089 ERBINQ96RT1 1412 aa9.9□□□□□ -0.82
HOXA9-206ENST00000497089 WASHC2CQ9Y4E1 1318 aa9.9□□□□□ -0.83
HOXA9-206ENST00000497089 NUTM2FA1L443 756 aa9.89□□□□□ -0.83
HOXA9-206ENST00000497089 TSR1Q2NL82 804 aaKnown RBP9.89□□□□□ -0.83
HOXA9-206ENST00000497089 ABCC3O15438 1527 aa9.89□□□□□ -0.83
HOXA9-206ENST00000497089 A2ML1A8K2U0 1454 aa9.89□□□□□ -0.83
HOXA9-206ENST00000497089 KIF15Q9NS87 1388 aa9.89□□□□□ -0.83
HOXA9-206ENST00000497089 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
HOXA9-206ENST00000497089 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
HOXA9-206ENST00000497089 TMEM132AQ24JP5 1023 aa9.88□□□□□ -0.83
HOXA9-206ENST00000497089 C6orf132Q5T0Z8 1188 aa9.88□□□□□ -0.83
HOXA9-206ENST00000497089 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
HOXA9-206ENST00000497089 PRDM15P57071 1507 aaPredicted RBP9.88□□□□□ -0.83
HOXA9-206ENST00000497089 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
HOXA9-206ENST00000497089 AK7Q96M32 723 aa9.88□□□□□ -0.83
HOXA9-206ENST00000497089 DEPDC5O75140 1603 aa9.87□□□□□ -0.83
HOXA9-206ENST00000497089 SPATA31D1Q6ZQQ2 1576 aa9.87□□□□□ -0.83
HOXA9-206ENST00000497089 TNRQ92752 1358 aa9.87□□□□□ -0.83
HOXA9-206ENST00000497089 ADGRL2O95490 1459 aa9.87□□□□□ -0.83
HOXA9-206ENST00000497089 NLRP1Q9C000 1473 aa9.87□□□□□ -0.83
HOXA9-206ENST00000497089 FBXO31Q5XUX0 539 aaPredicted RBP9.87□□□□□ -0.83
HOXA9-206ENST00000497089 ZNF687Q8N1G0 1237 aa9.87□□□□□ -0.83
HOXA9-206ENST00000497089 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
HOXA9-206ENST00000497089 ANKRD30AQ9BXX3 1397 aa9.86□□□□□ -0.83
HOXA9-206ENST00000497089 PTPREP23469 700 aa9.86□□□□□ -0.83
HOXA9-206ENST00000497089 CERKQ8TCT0 537 aa9.86□□□□□ -0.83
HOXA9-206ENST00000497089 ARHGAP31Q2M1Z3 1444 aa9.86□□□□□ -0.83
HOXA9-206ENST00000497089 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
HOXA9-206ENST00000497089 CEP152O94986 1710 aa9.85□□□□□ -0.83
HOXA9-206ENST00000497089 GPR37O15354 613 aa9.85□□□□□ -0.83
HOXA9-206ENST00000497089 PTGDRQ13258 359 aa9.85□□□□□ -0.83
HOXA9-206ENST00000497089 RRP7BPQ9NSQ0 103 aa9.85□□□□□ -0.83
HOXA9-206ENST00000497089 ERVK-7P63135 1459 aa9.84□□□□□ -0.83
HOXA9-206ENST00000497089 VWDEQ8N2E2 1590 aa9.84□□□□□ -0.83
HOXA9-206ENST00000497089 NPDC1Q9NQX5 325 aaPredicted RBP9.84□□□□□ -0.83
HOXA9-206ENST00000497089 LMTK2Q8IWU2 1503 aa9.83□□□□□ -0.84
HOXA9-206ENST00000497089 FCHSD2O94868 740 aa9.83□□□□□ -0.84
HOXA9-206ENST00000497089 PBX2P40425 430 aa9.83□□□□□ -0.84
HOXA9-206ENST00000497089 POTEEQ6S8J3 1075 aa9.83□□□□□ -0.84
HOXA9-206ENST00000497089 KCNK17Q96T54 332 aa9.83□□□□□ -0.84
HOXA9-206ENST00000497089 POLR1AO95602 1720 aaPredicted RBP9.83□□□□□ -0.84
HOXA9-206ENST00000497089 ARHGAP33O14559 1287 aa9.82□□□□□ -0.84
HOXA9-206ENST00000497089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.82□□□□□ -0.84
HOXA9-206ENST00000497089 IQSEC2Q5JU85 1478 aa9.82□□□□□ -0.84
HOXA9-206ENST00000497089 UGGT1Q9NYU2 1555 aa9.82□□□□□ -0.84
HOXA9-206ENST00000497089 NEURL4Q96JN8 1562 aa9.81□□□□□ -0.84
HOXA9-206ENST00000497089 PPP1R3GB7ZBB8 358 aa9.81□□□□□ -0.84
HOXA9-206ENST00000497089 COL9A1P20849 921 aa9.81□□□□□ -0.84
HOXA9-206ENST00000497089 THEMISQ8N1K5 641 aaPredicted RBP9.81□□□□□ -0.84
HOXA9-206ENST00000497089 MED14O60244 1454 aa9.8□□□□□ -0.84
HOXA9-206ENST00000497089 ROCK1Q13464 1354 aa9.8□□□□□ -0.84
HOXA9-206ENST00000497089 KANK1Q14678 1352 aa9.8□□□□□ -0.84
HOXA9-206ENST00000497089 PSEN2P49810 448 aa9.8□□□□□ -0.84
HOXA9-206ENST00000497089 FAM50AQ14320 339 aaKnown RBP9.8□□□□□ -0.84
HOXA9-206ENST00000497089 HIC1Q14526 733 aa9.8□□□□□ -0.84
HOXA9-206ENST00000497089 CHIC2Q9UKJ5 165 aa9.8□□□□□ -0.84
HOXA9-206ENST00000497089 ANKRD50Q9ULJ7 1429 aa9.8□□□□□ -0.84
HOXA9-206ENST00000497089 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
HOXA9-206ENST00000497089 CFAP65Q6ZU64 1925 aaKnown RBP9.79□□□□□ -0.84
HOXA9-206ENST00000497089 MINK1Q8N4C8 1332 aaPredicted RBP9.79□□□□□ -0.84
HOXA9-206ENST00000497089 UBR1Q8IWV7 1749 aa9.79□□□□□ -0.84
HOXA9-206ENST00000497089 EFCAB6Q5THR3 1501 aa9.78□□□□□ -0.84
HOXA9-206ENST00000497089 KDM5AP29375 1690 aaKnown RBP9.78□□□□□ -0.84
HOXA9-206ENST00000497089 GNPATO15228 680 aa9.78□□□□□ -0.84
HOXA9-206ENST00000497089 ANKLE2Q86XL3 938 aa9.78□□□□□ -0.84
HOXA9-206ENST00000497089 UNC13BO14795 1591 aa9.77□□□□□ -0.84
HOXA9-206ENST00000497089 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.84
HOXA9-206ENST00000497089 RPRD2Q5VT52 1461 aaKnown RBP9.77□□□□□ -0.85
HOXA9-206ENST00000497089 ARHGAP23Q9P227 1491 aa9.77□□□□□ -0.85
HOXA9-206ENST00000497089 SLIT1O75093 1534 aa9.77□□□□□ -0.85
HOXA9-206ENST00000497089 NOS1P29475 1434 aa9.77□□□□□ -0.85
HOXA9-206ENST00000497089 TRIM66O15016 1216 aa9.76□□□□□ -0.85
HOXA9-206ENST00000497089 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
HOXA9-206ENST00000497089 RBM27Q9P2N5 1060 aaKnown RBP9.76□□□□□ -0.85
HOXA9-206ENST00000497089 ZNF335Q9H4Z2 1342 aaPredicted RBP9.76□□□□□ -0.85
HOXA9-206ENST00000497089 ACIN1Q9UKV3 1341 aaKnown RBP9.76□□□□□ -0.85
HOXA9-206ENST00000497089 PRSS12P56730 875 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 DMRTA1Q5VZB9 504 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 TET3O43151 1660 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 SYNMO15061 1565 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 PIK3C2BO00750 1634 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 NPHP4O75161 1426 aaPredicted RBP9.75□□□□□ -0.85
HOXA9-206ENST00000497089 RRBP1Q9P2E9 1410 aaKnown RBP9.75□□□□□ -0.85
HOXA9-206ENST00000497089 IQGAP1P46940 1657 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 CDCA7LQ96GN5 454 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 ZBED2Q9BTP6 218 aa9.75□□□□□ -0.85
HOXA9-206ENST00000497089 GCC2Q8IWJ2 1684 aa9.74□□□□□ -0.85
HOXA9-206ENST00000497089 CPS1P31327 1500 aa9.74□□□□□ -0.85
HOXA9-206ENST00000497089 IRF6O14896 467 aa9.74□□□□□ -0.85
HOXA9-206ENST00000497089 CENPBP07199 599 aaPredicted RBP9.74□□□□□ -0.85
HOXA9-206ENST00000497089 FECHP22830 423 aa9.74□□□□□ -0.85
HOXA9-206ENST00000497089 PADI6Q6TGC4 694 aa9.74□□□□□ -0.85
HOXA9-206ENST00000497089 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms