RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 SLC24A1O60721 1099 aa8.49□□□□□ -1.05
VPS26A-208ENST00000497022 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
VPS26A-208ENST00000497022 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
VPS26A-208ENST00000497022 BAP1Q92560 729 aa8.49□□□□□ -1.05
VPS26A-208ENST00000497022 TIMP2P16035 220 aa8.48□□□□□ -1.05
VPS26A-208ENST00000497022 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
VPS26A-208ENST00000497022 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
VPS26A-208ENST00000497022 FAM174AQ8TBP5 190 aa8.46□□□□□ -1.06
VPS26A-208ENST00000497022 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
VPS26A-208ENST00000497022 PURBQ96QR8 312 aaKnown RBP8.46□□□□□ -1.06
VPS26A-208ENST00000497022 MTMR2Q13614 643 aa8.45□□□□□ -1.06
VPS26A-208ENST00000497022 KLF16Q9BXK1 252 aaPredicted RBP8.45□□□□□ -1.06
VPS26A-208ENST00000497022 CDK15Q96Q40 435 aa8.44□□□□□ -1.06
VPS26A-208ENST00000497022 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
VPS26A-208ENST00000497022 MOXD2PA6NHM9 499 aa8.42□□□□□ -1.06
VPS26A-208ENST00000497022 GJA5P36382 358 aa8.42□□□□□ -1.06
VPS26A-208ENST00000497022 NDUFV2P19404 249 aa8.41□□□□□ -1.06
VPS26A-208ENST00000497022 KCNMA1Q12791 1236 aa8.41□□□□□ -1.06
VPS26A-208ENST00000497022 SOBPA7XYQ1 873 aa8.4□□□□□ -1.06
VPS26A-208ENST00000497022 MAN1A2O60476 641 aa8.4□□□□□ -1.06
VPS26A-208ENST00000497022 NR5A1Q13285 461 aa8.4□□□□□ -1.06
VPS26A-208ENST00000497022 ZIC2O95409 532 aaPredicted RBP8.39□□□□□ -1.07
VPS26A-208ENST00000497022 CTHP32929 405 aa8.39□□□□□ -1.07
VPS26A-208ENST00000497022 LYPD8Q6UX82 237 aa8.39□□□□□ -1.07
VPS26A-208ENST00000497022 DIXDC1Q155Q3 683 aa8.38□□□□□ -1.07
VPS26A-208ENST00000497022 PPFIA3O75145 1194 aa8.37□□□□□ -1.07
VPS26A-208ENST00000497022 UPP2O95045 317 aa8.37□□□□□ -1.07
VPS26A-208ENST00000497022 ZC3H15Q8WU90 426 aaKnown RBP8.37□□□□□ -1.07
VPS26A-208ENST00000497022 ITPKCQ96DU7 683 aa8.37□□□□□ -1.07
VPS26A-208ENST00000497022 ZFAND3Q9H8U3 227 aa8.37□□□□□ -1.07
VPS26A-208ENST00000497022 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
VPS26A-208ENST00000497022 TTLL12Q14166 644 aaPredicted RBP8.36□□□□□ -1.07
VPS26A-208ENST00000497022 SUZ12Q15022 739 aaKnown RBP8.36□□□□□ -1.07
VPS26A-208ENST00000497022 AMHR2Q16671 573 aa8.36□□□□□ -1.07
VPS26A-208ENST00000497022 FOXJ1Q92949 421 aa8.36□□□□□ -1.07
VPS26A-208ENST00000497022 SPTLC1O15269 473 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 ZMYND10O75800 440 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 GSK3AP49840 483 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 C6orf118Q5T5N4 469 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
VPS26A-208ENST00000497022 RNF225M0QZC1 329 aaPredicted RBP8.34□□□□□ -1.07
VPS26A-208ENST00000497022 NR3C2P08235 984 aa8.34□□□□□ -1.07
VPS26A-208ENST00000497022 BMP2P12643 396 aa8.34□□□□□ -1.07
VPS26A-208ENST00000497022 RSBN1LQ6PCB5 846 aaPredicted RBP8.34□□□□□ -1.07
VPS26A-208ENST00000497022 BPHLQ86WA6 291 aaPredicted RBP8.34□□□□□ -1.07
VPS26A-208ENST00000497022 GRM5P41594 1212 aa8.33□□□□□ -1.08
VPS26A-208ENST00000497022 GIGYF2Q6Y7W6 1299 aaKnown RBP8.33□□□□□ -1.08
VPS26A-208ENST00000497022 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
VPS26A-208ENST00000497022 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
VPS26A-208ENST00000497022 AGERQ15109 404 aa8.32□□□□□ -1.08
VPS26A-208ENST00000497022 BEGAINQ9BUH8 593 aa8.32□□□□□ -1.08
VPS26A-208ENST00000497022 ZBTB3Q9H5J0 574 aa8.32□□□□□ -1.08
VPS26A-208ENST00000497022 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
VPS26A-208ENST00000497022 C4orf48Q5BLP8 95 aa8.31□□□□□ -1.08
VPS26A-208ENST00000497022 PRPF38BQ5VTL8 546 aaKnown RBP8.31□□□□□ -1.08
VPS26A-208ENST00000497022 TMEM151AQ8N4L1 468 aa8.31□□□□□ -1.08
VPS26A-208ENST00000497022 KCTD17Q8N5Z5 321 aa8.31□□□□□ -1.08
VPS26A-208ENST00000497022 BCANQ96GW7 911 aa8.31□□□□□ -1.08
VPS26A-208ENST00000497022 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
VPS26A-208ENST00000497022 DNMT3LQ9UJW3 386 aa8.31□□□□□ -1.08
VPS26A-208ENST00000497022 MAP4K5Q9Y4K4 846 aa8.31□□□□□ -1.08
VPS26A-208ENST00000497022 ARMC2Q8NEN0 867 aa8.3□□□□□ -1.08
VPS26A-208ENST00000497022 TSEN34Q9BSV6 310 aaKnown RBP8.3□□□□□ -1.08
VPS26A-208ENST00000497022 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
VPS26A-208ENST00000497022 HRCP23327 699 aa8.29□□□□□ -1.08
VPS26A-208ENST00000497022 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.29□□□□□ -1.08
VPS26A-208ENST00000497022 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
VPS26A-208ENST00000497022 RASSF7Q02833 373 aa8.28□□□□□ -1.08
VPS26A-208ENST00000497022 TRMT44Q8IYL2 757 aaKnown RBP8.28□□□□□ -1.08
VPS26A-208ENST00000497022 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
VPS26A-208ENST00000497022 GDF11O95390 407 aa8.27□□□□□ -1.09
VPS26A-208ENST00000497022 FSHRP23945 695 aa8.27□□□□□ -1.09
VPS26A-208ENST00000497022 KRT76Q01546 638 aa8.27□□□□□ -1.09
VPS26A-208ENST00000497022 NBPF14Q5TI25 921 aa8.27□□□□□ -1.09
VPS26A-208ENST00000497022 SH3RF1Q7Z6J0 888 aa8.27□□□□□ -1.09
VPS26A-208ENST00000497022 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
VPS26A-208ENST00000497022 ADAMTS8Q9UP79 889 aa8.26□□□□□ -1.09
VPS26A-208ENST00000497022 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
VPS26A-208ENST00000497022 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
VPS26A-208ENST00000497022 CNTNAP3BQ96NU0 1288 aa8.25□□□□□ -1.09
VPS26A-208ENST00000497022 CNTNAP3Q9BZ76 1288 aa8.25□□□□□ -1.09
VPS26A-208ENST00000497022 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
VPS26A-208ENST00000497022 PTSQ03393 145 aa8.24□□□□□ -1.09
VPS26A-208ENST00000497022 VASH1Q7L8A9 365 aaPredicted RBP8.24□□□□□ -1.09
VPS26A-208ENST00000497022 RIC3Q7Z5B4 369 aa8.24□□□□□ -1.09
VPS26A-208ENST00000497022 GPR161Q8N6U8 529 aaKnown RBP8.24□□□□□ -1.09
VPS26A-208ENST00000497022 SH3BP5LQ7L8J4 393 aa8.23□□□□□ -1.09
VPS26A-208ENST00000497022 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
VPS26A-208ENST00000497022 PARP9Q8IXQ6 854 aa8.22□□□□□ -1.09
VPS26A-208ENST00000497022 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
VPS26A-208ENST00000497022 GPKOWQ92917 476 aaPredicted RBP eCLIP8.22□□□□□ -1.09
VPS26A-208ENST00000497022 AK7Q96M32 723 aa8.22□□□□□ -1.09
VPS26A-208ENST00000497022 COL25A1Q9BXS0 654 aaPredicted RBP8.22□□□□□ -1.09
VPS26A-208ENST00000497022 ZNF385CQ66K41 422 aaPredicted RBP8.21□□□□□ -1.1
VPS26A-208ENST00000497022 SVOPQ8N4V2 548 aa8.21□□□□□ -1.1
VPS26A-208ENST00000497022 TRIM66O15016 1216 aa8.2□□□□□ -1.1
VPS26A-208ENST00000497022 SPINT1O43278 529 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms