RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 RGPD8O14715 1765 aaPredicted RBP13.63□□□□□ -0.23
C4A-258ENST00000496659 ACEP12821 1306 aa13.63□□□□□ -0.23
C4A-258ENST00000496659 CGNL1Q0VF96 1302 aa13.63□□□□□ -0.23
C4A-258ENST00000496659 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
C4A-258ENST00000496659 ANP32CO43423 234 aa13.62□□□□□ -0.23
C4A-258ENST00000496659 USP6P35125 1406 aa13.62□□□□□ -0.23
C4A-258ENST00000496659 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
C4A-258ENST00000496659 NRKQ7Z2Y5 1582 aa13.61□□□□□ -0.23
C4A-258ENST00000496659 NPHP3Q7Z494 1330 aa13.6□□□□□ -0.23
C4A-258ENST00000496659 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
C4A-258ENST00000496659 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
C4A-258ENST00000496659 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
C4A-258ENST00000496659 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
C4A-258ENST00000496659 NUTM2AQ8IVF1 878 aaPredicted RBP13.59□□□□□ -0.23
C4A-258ENST00000496659 ORAI2Q96SN7 254 aa13.59□□□□□ -0.23
C4A-258ENST00000496659 SPATA31A6Q5VVP1 1343 aa13.59□□□□□ -0.23
C4A-258ENST00000496659 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
C4A-258ENST00000496659 PSME1Q06323 249 aa13.58□□□□□ -0.24
C4A-258ENST00000496659 SHPRHQ149N8 1683 aa13.57□□□□□ -0.24
C4A-258ENST00000496659 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
C4A-258ENST00000496659 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
C4A-258ENST00000496659 RALBP1Q15311 655 aa13.56□□□□□ -0.24
C4A-258ENST00000496659 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
C4A-258ENST00000496659 TTC21BQ7Z4L5 1316 aa13.56□□□□□ -0.24
C4A-258ENST00000496659 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
C4A-258ENST00000496659 AMER1Q5JTC6 1135 aaPredicted RBP13.55□□□□□ -0.24
C4A-258ENST00000496659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.24
C4A-258ENST00000496659 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
C4A-258ENST00000496659 SSH2Q76I76 1423 aa13.55□□□□□ -0.24
C4A-258ENST00000496659 FOXO3O43524 673 aa13.54□□□□□ -0.24
C4A-258ENST00000496659 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
C4A-258ENST00000496659 SBNO1A3KN83 1393 aa13.54□□□□□ -0.24
C4A-258ENST00000496659 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
C4A-258ENST00000496659 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
C4A-258ENST00000496659 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
C4A-258ENST00000496659 PRKRIP1Q9H875 184 aaPredicted RBP13.53□□□□□ -0.24
C4A-258ENST00000496659 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
C4A-258ENST00000496659 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
C4A-258ENST00000496659 COG3Q96JB2 828 aa13.52□□□□□ -0.25
C4A-258ENST00000496659 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.25
C4A-258ENST00000496659 PXDNQ92626 1479 aa13.52□□□□□ -0.25
C4A-258ENST00000496659 TRPM3Q9HCF6 1732 aaPredicted RBP13.52□□□□□ -0.25
C4A-258ENST00000496659 PIK3C2AO00443 1686 aa13.51□□□□□ -0.25
C4A-258ENST00000496659 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
C4A-258ENST00000496659 ARHGEF10O15013 1369 aa13.51□□□□□ -0.25
C4A-258ENST00000496659 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
C4A-258ENST00000496659 MYBBP1AQ9BQG0 1328 aaKnown RBP13.51□□□□□ -0.25
C4A-258ENST00000496659 FYB1O15117 783 aa13.51□□□□□ -0.25
C4A-258ENST00000496659 CNGB1Q14028 1251 aaPredicted RBP13.51□□□□□ -0.25
C4A-258ENST00000496659 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
C4A-258ENST00000496659 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
C4A-258ENST00000496659 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
C4A-258ENST00000496659 AFF2P51816 1311 aa13.5□□□□□ -0.25
C4A-258ENST00000496659 ZNF772Q68DY9 489 aaPredicted RBP13.5□□□□□ -0.25
C4A-258ENST00000496659 NME9Q86XW9 330 aa13.5□□□□□ -0.25
C4A-258ENST00000496659 ABTB2Q8N961 1025 aa13.5□□□□□ -0.25
C4A-258ENST00000496659 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
C4A-258ENST00000496659 GGNBP2Q9H3C7 697 aa13.49□□□□□ -0.25
C4A-258ENST00000496659 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
C4A-258ENST00000496659 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
C4A-258ENST00000496659 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
C4A-258ENST00000496659 C8orf37Q96NL8 207 aa13.48□□□□□ -0.25
C4A-258ENST00000496659 CCER2I3L3R5 266 aa13.47□□□□□ -0.25
C4A-258ENST00000496659 NLRP6P59044 892 aa13.47□□□□□ -0.25
C4A-258ENST00000496659 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
C4A-258ENST00000496659 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
C4A-258ENST00000496659 RXRBP28702 533 aa13.46□□□□□ -0.25
C4A-258ENST00000496659 KCNH5Q8NCM2 988 aa13.46□□□□□ -0.25
C4A-258ENST00000496659 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
C4A-258ENST00000496659 MIER1Q8N108 512 aa13.45□□□□□ -0.26
C4A-258ENST00000496659 QTRT2Q9H974 415 aaKnown RBP13.45□□□□□ -0.26
C4A-258ENST00000496659 SLIT3O75094 1523 aa13.44□□□□□ -0.26
C4A-258ENST00000496659 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
C4A-258ENST00000496659 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
C4A-258ENST00000496659 USP19O94966 1318 aa13.43□□□□□ -0.26
C4A-258ENST00000496659 CFAP53Q96M91 514 aa13.43□□□□□ -0.26
C4A-258ENST00000496659 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
C4A-258ENST00000496659 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
C4A-258ENST00000496659 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
C4A-258ENST00000496659 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
C4A-258ENST00000496659 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.26
C4A-258ENST00000496659 KIF24Q5T7B8 1368 aa13.42□□□□□ -0.26
C4A-258ENST00000496659 PHRF1Q9P1Y6 1649 aaKnown RBP13.42□□□□□ -0.26
C4A-258ENST00000496659 HAP1P54257 671 aaPredicted RBP13.41□□□□□ -0.26
C4A-258ENST00000496659 MRS2Q9HD23 443 aa13.41□□□□□ -0.26
C4A-258ENST00000496659 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
C4A-258ENST00000496659 COL22A1Q8NFW1 1626 aaPredicted RBP13.41□□□□□ -0.26
C4A-258ENST00000496659 RTL1A6NKG5 1358 aa13.41□□□□□ -0.26
C4A-258ENST00000496659 CDK12Q9NYV4 1490 aaPredicted RBP13.41□□□□□ -0.26
C4A-258ENST00000496659 RBM6P78332 1123 aaKnown RBP13.4□□□□□ -0.26
C4A-258ENST00000496659 NFAT5O94916 1531 aa13.39□□□□□ -0.27
C4A-258ENST00000496659 FNBP4Q8N3X1 1017 aaPredicted RBP13.39□□□□□ -0.27
C4A-258ENST00000496659 USP21Q9UK80 565 aa13.39□□□□□ -0.27
C4A-258ENST00000496659 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
C4A-258ENST00000496659 ABCC6O95255 1503 aa13.39□□□□□ -0.27
C4A-258ENST00000496659 FLT4P35916 1363 aa13.38□□□□□ -0.27
C4A-258ENST00000496659 SOX12O15370 315 aa13.38□□□□□ -0.27
C4A-258ENST00000496659 GCP02774 474 aa13.38□□□□□ -0.27
C4A-258ENST00000496659 MTHFSP49914 203 aa13.38□□□□□ -0.27
C4A-258ENST00000496659 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms