RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 MED14O60244 1454 aa19.28■□□□□ 0.68
UBXN11-216ENST00000496466 TMEM2Q9UHN6 1383 aa19.28■□□□□ 0.68
UBXN11-216ENST00000496466 CEBPAP49715 358 aaPredicted RBP19.28■□□□□ 0.68
UBXN11-216ENST00000496466 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
UBXN11-216ENST00000496466 RGS3P49796 1198 aa19.27■□□□□ 0.68
UBXN11-216ENST00000496466 DDRGK1Q96HY6 314 aa19.27■□□□□ 0.68
UBXN11-216ENST00000496466 ADGRB2O60241 1585 aa19.27■□□□□ 0.67
UBXN11-216ENST00000496466 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
UBXN11-216ENST00000496466 DEKP35659 375 aaKnown RBP19.26■□□□□ 0.67
UBXN11-216ENST00000496466 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.26■□□□□ 0.67
UBXN11-216ENST00000496466 CLUAP1Q96AJ1 413 aa19.26■□□□□ 0.67
UBXN11-216ENST00000496466 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
UBXN11-216ENST00000496466 ANKRD26Q9UPS8 1709 aa19.26■□□□□ 0.67
UBXN11-216ENST00000496466 FRAT1Q92837 279 aaPredicted RBP19.26■□□□□ 0.67
UBXN11-216ENST00000496466 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
UBXN11-216ENST00000496466 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
UBXN11-216ENST00000496466 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
UBXN11-216ENST00000496466 ATP7BP35670 1465 aa19.24■□□□□ 0.67
UBXN11-216ENST00000496466 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
UBXN11-216ENST00000496466 LTKP29376 864 aa19.22■□□□□ 0.67
UBXN11-216ENST00000496466 RTL5Q5HYW3 569 aaPredicted RBP19.22■□□□□ 0.67
UBXN11-216ENST00000496466 TECPR2O15040 1411 aa19.22■□□□□ 0.67
UBXN11-216ENST00000496466 KIF20BQ96Q89 1820 aa19.22■□□□□ 0.67
UBXN11-216ENST00000496466 FBLN1P23142 703 aa19.22■□□□□ 0.67
UBXN11-216ENST00000496466 PLEKHF1Q96S99 279 aa19.22■□□□□ 0.67
UBXN11-216ENST00000496466 FAM135BQ49AJ0 1406 aa19.21■□□□□ 0.67
UBXN11-216ENST00000496466 PPIP5K1Q6PFW1 1433 aa19.21■□□□□ 0.67
UBXN11-216ENST00000496466 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
UBXN11-216ENST00000496466 SIRT1Q96EB6 747 aa19.21■□□□□ 0.67
UBXN11-216ENST00000496466 NUDT16Q96DE0 195 aaKnown RBP19.2■□□□□ 0.66
UBXN11-216ENST00000496466 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
UBXN11-216ENST00000496466 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
UBXN11-216ENST00000496466 ADAMTS13Q76LX8 1427 aa19.2■□□□□ 0.66
UBXN11-216ENST00000496466 RLBP1P12271 317 aa19.2■□□□□ 0.66
UBXN11-216ENST00000496466 BCL2L13Q9BXK5 485 aa19.2■□□□□ 0.66
UBXN11-216ENST00000496466 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
UBXN11-216ENST00000496466 AAMPQ13685 434 aa19.19■□□□□ 0.66
UBXN11-216ENST00000496466 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
UBXN11-216ENST00000496466 ROBO2Q9HCK4 1378 aa19.19■□□□□ 0.66
UBXN11-216ENST00000496466 CPS1P31327 1500 aa19.18■□□□□ 0.66
UBXN11-216ENST00000496466 DIAPH1O60610 1272 aaKnown RBP19.18■□□□□ 0.66
UBXN11-216ENST00000496466 PNPLA6Q8IY17 1366 aa19.18■□□□□ 0.66
UBXN11-216ENST00000496466 TMPOP42166 694 aaKnown RBP19.17■□□□□ 0.66
UBXN11-216ENST00000496466 NME9Q86XW9 330 aa19.17■□□□□ 0.66
UBXN11-216ENST00000496466 PPM1GO15355 546 aaPredicted RBP19.17■□□□□ 0.66
UBXN11-216ENST00000496466 POLKQ9UBT6 870 aa19.17■□□□□ 0.66
UBXN11-216ENST00000496466 CCDC61Q9Y6R9 512 aa19.17■□□□□ 0.66
UBXN11-216ENST00000496466 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
UBXN11-216ENST00000496466 ZRANB1Q9UGI0 708 aa19.16■□□□□ 0.66
UBXN11-216ENST00000496466 TRIM35Q9UPQ4 493 aa19.16■□□□□ 0.66
UBXN11-216ENST00000496466 PLEKHG1Q9ULL1 1385 aa19.16■□□□□ 0.66
UBXN11-216ENST00000496466 EDC4Q6P2E9 1401 aaKnown RBP19.16■□□□□ 0.66
UBXN11-216ENST00000496466 MAPK8IP3Q9UPT6 1336 aa19.16■□□□□ 0.66
UBXN11-216ENST00000496466 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
UBXN11-216ENST00000496466 PRR36Q9H6K5 1346 aa19.15■□□□□ 0.66
UBXN11-216ENST00000496466 CT47B1P0C2W7 299 aaPredicted RBP19.15■□□□□ 0.66
UBXN11-216ENST00000496466 TSR2Q969E8 191 aaKnown RBP19.15■□□□□ 0.66
UBXN11-216ENST00000496466 SLC26A8Q96RN1 970 aa19.15■□□□□ 0.66
UBXN11-216ENST00000496466 VIRMAQ69YN4 1812 aaKnown RBP19.14■□□□□ 0.65
UBXN11-216ENST00000496466 C3P01024 1663 aa19.13■□□□□ 0.65
UBXN11-216ENST00000496466 NEFMP07197 916 aa19.13■□□□□ 0.65
UBXN11-216ENST00000496466 CDC42BPGQ6DT37 1551 aa19.12■□□□□ 0.65
UBXN11-216ENST00000496466 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
UBXN11-216ENST00000496466 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
UBXN11-216ENST00000496466 EXOSC9Q06265 439 aaKnown RBP19.12■□□□□ 0.65
UBXN11-216ENST00000496466 ZKSCAN2Q63HK3 967 aa19.12■□□□□ 0.65
UBXN11-216ENST00000496466 USP35Q9P2H5 1018 aa19.12■□□□□ 0.65
UBXN11-216ENST00000496466 EID1Q9Y6B2 187 aa19.12■□□□□ 0.65
UBXN11-216ENST00000496466 IL16Q14005 1332 aa19.11■□□□□ 0.65
UBXN11-216ENST00000496466 EMILIN1Q9Y6C2 1016 aa19.11■□□□□ 0.65
UBXN11-216ENST00000496466 MVPQ14764 893 aaKnown RBP19.11■□□□□ 0.65
UBXN11-216ENST00000496466 PTPRUQ92729 1446 aa19.1■□□□□ 0.65
UBXN11-216ENST00000496466 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.1■□□□□ 0.65
UBXN11-216ENST00000496466 RIPK4P57078 832 aa19.09■□□□□ 0.65
UBXN11-216ENST00000496466 NUTM2FA1L443 756 aa19.09■□□□□ 0.65
UBXN11-216ENST00000496466 DZIP1LQ8IYY4 767 aaKnown RBP19.09■□□□□ 0.65
UBXN11-216ENST00000496466 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
UBXN11-216ENST00000496466 DAXXQ9UER7 740 aaPredicted RBP19.09■□□□□ 0.65
UBXN11-216ENST00000496466 MAP2P11137 1827 aaKnown RBP19.08■□□□□ 0.64
UBXN11-216ENST00000496466 MON2Q7Z3U7 1717 aa19.08■□□□□ 0.64
UBXN11-216ENST00000496466 FCHSD2O94868 740 aa19.08■□□□□ 0.64
UBXN11-216ENST00000496466 COG3Q96JB2 828 aa19.08■□□□□ 0.64
UBXN11-216ENST00000496466 RWDD1Q9H446 243 aaPredicted RBP19.08■□□□□ 0.64
UBXN11-216ENST00000496466 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
UBXN11-216ENST00000496466 FER1L4A9Z1Z3 1794 aa19.08■□□□□ 0.64
UBXN11-216ENST00000496466 USP19O94966 1318 aa19.08■□□□□ 0.64
UBXN11-216ENST00000496466 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
UBXN11-216ENST00000496466 PRKAR2BP31323 418 aa19.07■□□□□ 0.64
UBXN11-216ENST00000496466 FTSJ3Q8IY81 847 aaKnown RBP19.07■□□□□ 0.64
UBXN11-216ENST00000496466 SSH1Q8WYL5 1049 aa19.07■□□□□ 0.64
UBXN11-216ENST00000496466 RSPH6AQ9H0K4 717 aa19.07■□□□□ 0.64
UBXN11-216ENST00000496466 ARHGAP23Q9P227 1491 aa19.07■□□□□ 0.64
UBXN11-216ENST00000496466 SLIT1O75093 1534 aa19.06■□□□□ 0.64
UBXN11-216ENST00000496466 LRRC7Q96NW7 1537 aa19.06■□□□□ 0.64
UBXN11-216ENST00000496466 ZNF692Q9BU19 519 aaPredicted RBP19.06■□□□□ 0.64
UBXN11-216ENST00000496466 AMOTL2Q9Y2J4 779 aa19.06■□□□□ 0.64
UBXN11-216ENST00000496466 AKAP12Q02952 1782 aa19.06■□□□□ 0.64
UBXN11-216ENST00000496466 HMOX1P09601 288 aa19.06■□□□□ 0.64
UBXN11-216ENST00000496466 RRS1Q15050 365 aaKnown RBP19.05■□□□□ 0.64
UBXN11-216ENST00000496466 ITSN1Q15811 1721 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms