RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 TBC1D2Q9BYX2 928 aa18.99■□□□□ 0.63
MACF1-223ENST00000496360 GRPEL1Q9HAV7 217 aa18.99■□□□□ 0.63
MACF1-223ENST00000496360 PIK3C2GO75747 1445 aa18.99■□□□□ 0.63
MACF1-223ENST00000496360 TRAK2O60296 914 aa18.99■□□□□ 0.63
MACF1-223ENST00000496360 KCNA6P17658 529 aa18.99■□□□□ 0.63
MACF1-223ENST00000496360 NUTM2DQ5VT03 806 aaPredicted RBP18.99■□□□□ 0.63
MACF1-223ENST00000496360 PMFBP1Q8TBY8 1022 aa18.99■□□□□ 0.63
MACF1-223ENST00000496360 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
MACF1-223ENST00000496360 TOM1O60784 492 aa18.97■□□□□ 0.63
MACF1-223ENST00000496360 CC2D1BQ5T0F9 858 aaKnown RBP18.97■□□□□ 0.63
MACF1-223ENST00000496360 MAP7D2Q96T17 732 aa18.97■□□□□ 0.63
MACF1-223ENST00000496360 E9PSI1 815 aa18.97■□□□□ 0.63
MACF1-223ENST00000496360 TMF1P82094 1093 aa18.97■□□□□ 0.63
MACF1-223ENST00000496360 CLUAP1Q96AJ1 413 aa18.97■□□□□ 0.63
MACF1-223ENST00000496360 TRIM44Q96DX7 344 aaPredicted RBP18.97■□□□□ 0.63
MACF1-223ENST00000496360 PANK3Q9H999 370 aa18.96■□□□□ 0.63
MACF1-223ENST00000496360 PANK2Q9BZ23 570 aa18.96■□□□□ 0.63
MACF1-223ENST00000496360 TBX22Q9Y458 520 aa18.96■□□□□ 0.63
MACF1-223ENST00000496360 KIF1BO60333 1816 aa18.95■□□□□ 0.62
MACF1-223ENST00000496360 NWD1Q149M9 1564 aa18.95■□□□□ 0.62
MACF1-223ENST00000496360 NPC1L1Q9UHC9 1359 aa18.94■□□□□ 0.62
MACF1-223ENST00000496360 SEC24BO95487 1268 aa18.94■□□□□ 0.62
MACF1-223ENST00000496360 IGHDP01880 384 aa18.94■□□□□ 0.62
MACF1-223ENST00000496360 TESK2Q96S53 571 aa18.94■□□□□ 0.62
MACF1-223ENST00000496360 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
MACF1-223ENST00000496360 ADAMTS13Q76LX8 1427 aa18.94■□□□□ 0.62
MACF1-223ENST00000496360 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
MACF1-223ENST00000496360 SKOR2Q2VWA4 1001 aaPredicted RBP18.93■□□□□ 0.62
MACF1-223ENST00000496360 DISP3Q9P2K9 1392 aa18.92■□□□□ 0.62
MACF1-223ENST00000496360 PPP2R1AP30153 589 aa18.92■□□□□ 0.62
MACF1-223ENST00000496360 XIRP1Q702N8 1843 aaKnown RBP18.91■□□□□ 0.62
MACF1-223ENST00000496360 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
MACF1-223ENST00000496360 TMEM94Q12767 1356 aa18.91■□□□□ 0.62
MACF1-223ENST00000496360 NEXMIFQ5QGS0 1516 aa18.91■□□□□ 0.62
MACF1-223ENST00000496360 ALKQ9UM73 1620 aa18.91■□□□□ 0.62
MACF1-223ENST00000496360 PROSER2Q86WR7 435 aaPredicted RBP18.91■□□□□ 0.62
MACF1-223ENST00000496360 CHD2O14647 1828 aaKnown RBP18.91■□□□□ 0.62
MACF1-223ENST00000496360 CIZ1Q9ULV3 898 aaPredicted RBP18.89■□□□□ 0.62
MACF1-223ENST00000496360 PIK3R4Q99570 1358 aa18.89■□□□□ 0.62
MACF1-223ENST00000496360 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
MACF1-223ENST00000496360 NRXN3Q9Y4C0 1643 aa18.87■□□□□ 0.61
MACF1-223ENST00000496360 CCDC173Q0VFZ6 552 aa18.87■□□□□ 0.61
MACF1-223ENST00000496360 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.87■□□□□ 0.61
MACF1-223ENST00000496360 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
MACF1-223ENST00000496360 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
MACF1-223ENST00000496360 CDCA8Q53HL2 280 aa18.86■□□□□ 0.61
MACF1-223ENST00000496360 PODXL2Q9NZ53 605 aa18.86■□□□□ 0.61
MACF1-223ENST00000496360 RPGRIP1LQ68CZ1 1315 aa18.86■□□□□ 0.61
MACF1-223ENST00000496360 MTERF4Q7Z6M4 381 aaKnown RBP18.86■□□□□ 0.61
MACF1-223ENST00000496360 GZF1Q9H116 711 aaPredicted RBP18.86■□□□□ 0.61
MACF1-223ENST00000496360 ASXL1Q8IXJ9 1541 aa18.85■□□□□ 0.61
MACF1-223ENST00000496360 RBM33Q96EV2 1170 aaKnown RBP18.85■□□□□ 0.61
MACF1-223ENST00000496360 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
MACF1-223ENST00000496360 PPP1R9BQ96SB3 815 aa18.85■□□□□ 0.61
MACF1-223ENST00000496360 OFD1O75665 1012 aa18.84■□□□□ 0.61
MACF1-223ENST00000496360 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
MACF1-223ENST00000496360 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.61
MACF1-223ENST00000496360 BCAR3O75815 825 aa18.83■□□□□ 0.61
MACF1-223ENST00000496360 HSCBQ8IWL3 235 aa18.83■□□□□ 0.61
MACF1-223ENST00000496360 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
MACF1-223ENST00000496360 HS1BP3Q53T59 392 aa18.83■□□□□ 0.6
MACF1-223ENST00000496360 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.6
MACF1-223ENST00000496360 PTPRUQ92729 1446 aa18.82■□□□□ 0.6
MACF1-223ENST00000496360 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
MACF1-223ENST00000496360 ZSCAN30Q86W11 494 aa18.82■□□□□ 0.6
MACF1-223ENST00000496360 HSPA1LP34931 641 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 KIAA1211Q6ZU35 1233 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 ARXQ96QS3 562 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 AMOTL2Q9Y2J4 779 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
MACF1-223ENST00000496360 DDIT3P35638 169 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
MACF1-223ENST00000496360 SNX21Q969T3 373 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 C22orf23Q9BZE7 217 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 MSH6P52701 1360 aa18.81■□□□□ 0.6
MACF1-223ENST00000496360 PPLO60437 1756 aa18.8■□□□□ 0.6
MACF1-223ENST00000496360 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
MACF1-223ENST00000496360 METP08581 1390 aa18.8■□□□□ 0.6
MACF1-223ENST00000496360 NBPF1Q3BBV0 1214 aa18.79■□□□□ 0.6
MACF1-223ENST00000496360 PDZRN3Q9UPQ7 1066 aa18.79■□□□□ 0.6
MACF1-223ENST00000496360 XRN1Q8IZH2 1706 aaKnown RBP18.78■□□□□ 0.6
MACF1-223ENST00000496360 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
MACF1-223ENST00000496360 SMC5Q8IY18 1101 aa18.77■□□□□ 0.6
MACF1-223ENST00000496360 PRDM4Q9UKN5 801 aa18.77■□□□□ 0.6
MACF1-223ENST00000496360 COG6Q9Y2V7 657 aa18.77■□□□□ 0.59
MACF1-223ENST00000496360 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
MACF1-223ENST00000496360 SMAP1Q8IYB5 467 aaPredicted RBP18.76■□□□□ 0.59
MACF1-223ENST00000496360 FAM135BQ49AJ0 1406 aa18.75■□□□□ 0.59
MACF1-223ENST00000496360 APAF1O14727 1248 aa18.75■□□□□ 0.59
MACF1-223ENST00000496360 MSNP26038 577 aaKnown RBP18.75■□□□□ 0.59
MACF1-223ENST00000496360 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
MACF1-223ENST00000496360 SETD1AO15047 1707 aaKnown RBP18.74■□□□□ 0.59
MACF1-223ENST00000496360 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
MACF1-223ENST00000496360 IFT172Q9UG01 1749 aa18.73■□□□□ 0.59
MACF1-223ENST00000496360 ADGRF5Q8IZF2 1346 aa18.73■□□□□ 0.59
MACF1-223ENST00000496360 RAB3GAP1Q15042 981 aa18.73■□□□□ 0.59
MACF1-223ENST00000496360 NCBP3Q53F19 620 aaKnown RBP18.73■□□□□ 0.59
MACF1-223ENST00000496360 PANK1Q8TE04 598 aa18.73■□□□□ 0.59
MACF1-223ENST00000496360 C19orf44Q9H6X5 657 aa18.73■□□□□ 0.59
MACF1-223ENST00000496360 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms