RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
PRPF3-207ENST00000496202 MYOM1P52179 1685 aa13.4□□□□□ -0.26
PRPF3-207ENST00000496202 USP6P35125 1406 aa13.4□□□□□ -0.26
PRPF3-207ENST00000496202 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
PRPF3-207ENST00000496202 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
PRPF3-207ENST00000496202 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
PRPF3-207ENST00000496202 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
PRPF3-207ENST00000496202 PNPLA6Q8IY17 1366 aa13.4□□□□□ -0.26
PRPF3-207ENST00000496202 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
PRPF3-207ENST00000496202 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
PRPF3-207ENST00000496202 ALS2Q96Q42 1657 aa13.38□□□□□ -0.27
PRPF3-207ENST00000496202 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
PRPF3-207ENST00000496202 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
PRPF3-207ENST00000496202 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
PRPF3-207ENST00000496202 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
PRPF3-207ENST00000496202 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
PRPF3-207ENST00000496202 SPATA31A6Q5VVP1 1343 aa13.37□□□□□ -0.27
PRPF3-207ENST00000496202 NRKQ7Z2Y5 1582 aa13.37□□□□□ -0.27
PRPF3-207ENST00000496202 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
PRPF3-207ENST00000496202 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
PRPF3-207ENST00000496202 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
PRPF3-207ENST00000496202 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
PRPF3-207ENST00000496202 HAP1P54257 671 aaPredicted RBP13.36□□□□□ -0.27
PRPF3-207ENST00000496202 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
PRPF3-207ENST00000496202 CCDC7Q96M83 1385 aa13.35□□□□□ -0.27
PRPF3-207ENST00000496202 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
PRPF3-207ENST00000496202 PIAS4Q8N2W9 510 aaPredicted RBP13.35□□□□□ -0.27
PRPF3-207ENST00000496202 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
PRPF3-207ENST00000496202 TTC21BQ7Z4L5 1316 aa13.35□□□□□ -0.27
PRPF3-207ENST00000496202 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
PRPF3-207ENST00000496202 MEX3CQ5U5Q3 659 aaKnown RBP13.34□□□□□ -0.27
PRPF3-207ENST00000496202 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.34□□□□□ -0.27
PRPF3-207ENST00000496202 MED1Q15648 1581 aaPredicted RBP13.33□□□□□ -0.28
PRPF3-207ENST00000496202 SSH2Q76I76 1423 aa13.33□□□□□ -0.28
PRPF3-207ENST00000496202 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
PRPF3-207ENST00000496202 PIK3C2AO00443 1686 aa13.33□□□□□ -0.28
PRPF3-207ENST00000496202 ABCA3Q99758 1704 aa13.33□□□□□ -0.28
PRPF3-207ENST00000496202 NLRP6P59044 892 aa13.32□□□□□ -0.28
PRPF3-207ENST00000496202 NLRP13Q86W25 1043 aa13.32□□□□□ -0.28
PRPF3-207ENST00000496202 WASHC2AQ641Q2 1341 aa13.32□□□□□ -0.28
PRPF3-207ENST00000496202 KIF20BQ96Q89 1820 aa13.32□□□□□ -0.28
PRPF3-207ENST00000496202 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
PRPF3-207ENST00000496202 CABLES1Q8TDN4 633 aa13.31□□□□□ -0.28
PRPF3-207ENST00000496202 ADAMTS2O95450 1211 aa13.3□□□□□ -0.28
PRPF3-207ENST00000496202 PANK3Q9H999 370 aa13.3□□□□□ -0.28
PRPF3-207ENST00000496202 LRP6O75581 1613 aa13.3□□□□□ -0.28
PRPF3-207ENST00000496202 PHRF1Q9P1Y6 1649 aaKnown RBP13.3□□□□□ -0.28
PRPF3-207ENST00000496202 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
PRPF3-207ENST00000496202 NME9Q86XW9 330 aa13.29□□□□□ -0.28
PRPF3-207ENST00000496202 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
PRPF3-207ENST00000496202 USP19O94966 1318 aa13.28□□□□□ -0.28
PRPF3-207ENST00000496202 CGNL1Q0VF96 1302 aa13.28□□□□□ -0.28
PRPF3-207ENST00000496202 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
PRPF3-207ENST00000496202 COG3Q96JB2 828 aa13.27□□□□□ -0.29
PRPF3-207ENST00000496202 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
PRPF3-207ENST00000496202 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.29
PRPF3-207ENST00000496202 SOX12O15370 315 aa13.26□□□□□ -0.29
PRPF3-207ENST00000496202 SLIT3O75094 1523 aa13.26□□□□□ -0.29
PRPF3-207ENST00000496202 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
PRPF3-207ENST00000496202 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
PRPF3-207ENST00000496202 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 NGLY1Q96IV0 654 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 GGNBP2Q9H3C7 697 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
PRPF3-207ENST00000496202 GCP02774 474 aa13.24□□□□□ -0.29
PRPF3-207ENST00000496202 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
PRPF3-207ENST00000496202 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
PRPF3-207ENST00000496202 ANKRD26Q9UPS8 1709 aa13.24□□□□□ -0.29
PRPF3-207ENST00000496202 NSD2O96028 1365 aa13.23□□□□□ -0.29
PRPF3-207ENST00000496202 KIAA0232Q92628 1395 aa13.23□□□□□ -0.29
PRPF3-207ENST00000496202 COL14A1Q05707 1796 aaKnown RBP13.23□□□□□ -0.29
PRPF3-207ENST00000496202 FYB1O15117 783 aa13.23□□□□□ -0.29
PRPF3-207ENST00000496202 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
PRPF3-207ENST00000496202 AFF2P51816 1311 aa13.22□□□□□ -0.29
PRPF3-207ENST00000496202 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
PRPF3-207ENST00000496202 NFAT5O94916 1531 aa13.22□□□□□ -0.29
PRPF3-207ENST00000496202 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
PRPF3-207ENST00000496202 CPDO75976 1380 aa13.2□□□□□ -0.3
PRPF3-207ENST00000496202 LTN1O94822 1766 aa13.2□□□□□ -0.3
PRPF3-207ENST00000496202 NWD2Q9ULI1 1742 aa13.2□□□□□ -0.3
PRPF3-207ENST00000496202 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
PRPF3-207ENST00000496202 FAM83GA6ND36 823 aa13.19□□□□□ -0.3
PRPF3-207ENST00000496202 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
PRPF3-207ENST00000496202 ZNF772Q68DY9 489 aaPredicted RBP13.19□□□□□ -0.3
PRPF3-207ENST00000496202 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
PRPF3-207ENST00000496202 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
PRPF3-207ENST00000496202 USP21Q9UK80 565 aa13.18□□□□□ -0.3
PRPF3-207ENST00000496202 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.18□□□□□ -0.3
PRPF3-207ENST00000496202 SLIT2O94813 1529 aa13.18□□□□□ -0.3
PRPF3-207ENST00000496202 TNNT2P45379 298 aaPredicted RBP13.17□□□□□ -0.3
PRPF3-207ENST00000496202 CC2D1BQ5T0F9 858 aaKnown RBP13.17□□□□□ -0.3
PRPF3-207ENST00000496202 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
PRPF3-207ENST00000496202 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
PRPF3-207ENST00000496202 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
PRPF3-207ENST00000496202 ABCC6O95255 1503 aa13.17□□□□□ -0.3
PRPF3-207ENST00000496202 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms