RNA–Protein interactions for RNA: ENST00000496120.6

PBX1-210, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-210ENST00000496120 PARD3Q8TEW0 1356 aa29.51■■■□□ 2.32
PBX1-210ENST00000496120 XPCQ01831 940 aaPredicted RBP29.51■■■□□ 2.32
PBX1-210ENST00000496120 KIF1AQ12756 1690 aa29.51■■■□□ 2.31
PBX1-210ENST00000496120 SRPK2P78362 688 aaKnown RBP29.5■■■□□ 2.31
PBX1-210ENST00000496120 RALBP1Q15311 655 aa29.5■■■□□ 2.31
PBX1-210ENST00000496120 CDK19Q9BWU1 502 aa29.5■■■□□ 2.31
PBX1-210ENST00000496120 ATRNO75882 1429 aa29.5■■■□□ 2.31
PBX1-210ENST00000496120 TRPC5Q9UL62 973 aaPredicted RBP29.5■■■□□ 2.31
PBX1-210ENST00000496120 KNSTRNQ9Y448 316 aa29.5■■■□□ 2.31
PBX1-210ENST00000496120 USP32Q8NFA0 1604 aa29.49■■■□□ 2.31
PBX1-210ENST00000496120 SLC12A5Q9H2X9 1139 aa29.49■■■□□ 2.31
PBX1-210ENST00000496120 TMC1Q8TDI8 760 aa29.48■■■□□ 2.31
PBX1-210ENST00000496120 NPC1L1Q9UHC9 1359 aa29.48■■■□□ 2.31
PBX1-210ENST00000496120 RGPD8O14715 1765 aaPredicted RBP29.46■■■□□ 2.31
PBX1-210ENST00000496120 WASLO00401 505 aaPredicted RBP29.45■■■□□ 2.31
PBX1-210ENST00000496120 CNGB1Q14028 1251 aaPredicted RBP29.45■■■□□ 2.31
PBX1-210ENST00000496120 AMER1Q5JTC6 1135 aaPredicted RBP29.45■■■□□ 2.31
PBX1-210ENST00000496120 ANKRD36BQ8N2N9 1353 aa29.45■■■□□ 2.31
PBX1-210ENST00000496120 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
PBX1-210ENST00000496120 YTHDC1Q96MU7 727 aaKnown RBP29.45■■■□□ 2.3
PBX1-210ENST00000496120 CARD14Q9BXL6 1004 aa29.45■■■□□ 2.3
PBX1-210ENST00000496120 CCDC184Q52MB2 194 aa29.42■■■□□ 2.3
PBX1-210ENST00000496120 SPATA31A3Q5VYP0 1347 aa29.42■■■□□ 2.3
PBX1-210ENST00000496120 MYBBP1AQ9BQG0 1328 aaKnown RBP29.42■■■□□ 2.3
PBX1-210ENST00000496120 NSD3Q9BZ95 1437 aa29.41■■■□□ 2.3
PBX1-210ENST00000496120 CC2D1BQ5T0F9 858 aaKnown RBP29.41■■■□□ 2.3
PBX1-210ENST00000496120 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.41■■■□□ 2.3
PBX1-210ENST00000496120 CD163L1Q9NR16 1453 aa29.4■■■□□ 2.3
PBX1-210ENST00000496120 TOPAZ1Q8N9V7 1692 aa29.4■■■□□ 2.3
PBX1-210ENST00000496120 EP400Q96L91 3159 aa29.38■■■□□ 2.29
PBX1-210ENST00000496120 KRT28Q7Z3Y7 464 aa29.37■■■□□ 2.29
PBX1-210ENST00000496120 MRS2Q9HD23 443 aa29.37■■■□□ 2.29
PBX1-210ENST00000496120 ATP7BP35670 1465 aa29.37■■■□□ 2.29
PBX1-210ENST00000496120 A0A1W2PP64 1363 aa29.37■■■□□ 2.29
PBX1-210ENST00000496120 SLIT2O94813 1529 aa29.35■■■□□ 2.29
PBX1-210ENST00000496120 PHF8Q9UPP1 1060 aa29.35■■■□□ 2.29
PBX1-210ENST00000496120 BRD4O60885 1362 aaPredicted RBP29.34■■■□□ 2.29
PBX1-210ENST00000496120 TNS3Q68CZ2 1445 aa29.34■■■□□ 2.29
PBX1-210ENST00000496120 AKAP12Q02952 1782 aa29.34■■■□□ 2.29
PBX1-210ENST00000496120 ITSN1Q15811 1721 aa29.33■■■□□ 2.29
PBX1-210ENST00000496120 TERF2IPQ9NYB0 399 aa29.33■■■□□ 2.29
PBX1-210ENST00000496120 PPIP5K1Q6PFW1 1433 aa29.32■■■□□ 2.28
PBX1-210ENST00000496120 NUDT16Q96DE0 195 aaKnown RBP29.31■■■□□ 2.28
PBX1-210ENST00000496120 GJD4Q96KN9 370 aaPredicted RBP29.31■■■□□ 2.28
PBX1-210ENST00000496120 CABP1Q9NZU7 370 aa29.31■■■□□ 2.28
PBX1-210ENST00000496120 ANKRD26Q9UPS8 1709 aa29.31■■■□□ 2.28
PBX1-210ENST00000496120 NLRP13Q86W25 1043 aa29.3■■■□□ 2.28
PBX1-210ENST00000496120 MON2Q7Z3U7 1717 aa29.3■■■□□ 2.28
PBX1-210ENST00000496120 GLI3P10071 1580 aa29.3■■■□□ 2.28
PBX1-210ENST00000496120 ABCA3Q99758 1704 aa29.3■■■□□ 2.28
PBX1-210ENST00000496120 ANKARQ7Z5J8 1434 aa29.29■■■□□ 2.28
PBX1-210ENST00000496120 PRR36Q9H6K5 1346 aa29.29■■■□□ 2.28
PBX1-210ENST00000496120 KIF20BQ96Q89 1820 aa29.29■■■□□ 2.28
PBX1-210ENST00000496120 SBNO1A3KN83 1393 aa29.28■■■□□ 2.28
PBX1-210ENST00000496120 PSME1Q06323 249 aa29.28■■■□□ 2.28
PBX1-210ENST00000496120 UNC5CLQ8IV45 518 aa29.28■■■□□ 2.28
PBX1-210ENST00000496120 HDGFL2Q7Z4V5 671 aaPredicted RBP29.27■■■□□ 2.28
PBX1-210ENST00000496120 CCDC61Q9Y6R9 512 aa29.27■■■□□ 2.28
PBX1-210ENST00000496120 CGNL1Q0VF96 1302 aa29.27■■■□□ 2.28
PBX1-210ENST00000496120 NSD2O96028 1365 aa29.27■■■□□ 2.28
PBX1-210ENST00000496120 CPSF1Q10570 1443 aaKnown RBP29.26■■■□□ 2.28
PBX1-210ENST00000496120 CENPBP07199 599 aaPredicted RBP29.25■■■□□ 2.27
PBX1-210ENST00000496120 PLCH1Q4KWH8 1693 aa29.24■■■□□ 2.27
PBX1-210ENST00000496120 NWD2Q9ULI1 1742 aa29.23■■■□□ 2.27
PBX1-210ENST00000496120 CABLES1Q8TDN4 633 aa29.23■■■□□ 2.27
PBX1-210ENST00000496120 TRPM3Q9HCF6 1732 aaPredicted RBP29.22■■■□□ 2.27
PBX1-210ENST00000496120 PPP2R1AP30153 589 aa29.22■■■□□ 2.27
PBX1-210ENST00000496120 ARHGEF10O15013 1369 aa29.22■■■□□ 2.27
PBX1-210ENST00000496120 PMFBP1Q8TBY8 1022 aa29.2■■■□□ 2.27
PBX1-210ENST00000496120 BRWD3Q6RI45 1802 aa29.19■■■□□ 2.26
PBX1-210ENST00000496120 SRCAPQ6ZRS2 3230 aa29.19■■■□□ 2.26
PBX1-210ENST00000496120 HAP1P54257 671 aaPredicted RBP29.19■■■□□ 2.26
PBX1-210ENST00000496120 NRKQ7Z2Y5 1582 aa29.18■■■□□ 2.26
PBX1-210ENST00000496120 EDC4Q6P2E9 1401 aaKnown RBP29.18■■■□□ 2.26
PBX1-210ENST00000496120 PNISRQ8TF01 805 aaKnown RBP29.18■■■□□ 2.26
PBX1-210ENST00000496120 ALS2Q96Q42 1657 aa29.17■■■□□ 2.26
PBX1-210ENST00000496120 CCDC125Q86Z20 511 aa29.17■■■□□ 2.26
PBX1-210ENST00000496120 FAM9BQ8IZU0 186 aa29.17■■■□□ 2.26
PBX1-210ENST00000496120 PLEKHG3A1L390 1219 aa29.16■■■□□ 2.26
PBX1-210ENST00000496120 LMOD2Q6P5Q4 547 aa29.15■■■□□ 2.26
PBX1-210ENST00000496120 MORC1Q86VD1 984 aa29.15■■■□□ 2.26
PBX1-210ENST00000496120 VPS72Q15906 364 aa29.15■■■□□ 2.26
PBX1-210ENST00000496120 PLEKHG5O94827 1062 aa29.14■■■□□ 2.25
PBX1-210ENST00000496120 ZNF692Q9BU19 519 aaPredicted RBP29.12■■■□□ 2.25
PBX1-210ENST00000496120 NRAPQ86VF7 1730 aa29.12■■■□□ 2.25
PBX1-210ENST00000496120 FYB1O15117 783 aa29.11■■■□□ 2.25
PBX1-210ENST00000496120 CRYBG1Q9Y4K1 1723 aa29.09■■■□□ 2.25
PBX1-210ENST00000496120 ACEP12821 1306 aa29.09■■■□□ 2.25
PBX1-210ENST00000496120 POLR3AO14802 1390 aaPredicted RBP29.09■■■□□ 2.25
PBX1-210ENST00000496120 FAM83GA6ND36 823 aa29.09■■■□□ 2.25
PBX1-210ENST00000496120 BLMP54132 1417 aaPredicted RBP29.08■■■□□ 2.25
PBX1-210ENST00000496120 ONECUT3O60422 494 aaPredicted RBP29.08■■■□□ 2.25
PBX1-210ENST00000496120 SEPT12Q8IYM1 358 aa29.08■■■□□ 2.25
PBX1-210ENST00000496120 GGNBP2Q9H3C7 697 aa29.07■■■□□ 2.24
PBX1-210ENST00000496120 USP6P35125 1406 aa29.06■■■□□ 2.24
PBX1-210ENST00000496120 COL14A1Q05707 1796 aaKnown RBP29.06■■■□□ 2.24
PBX1-210ENST00000496120 ZRANB1Q9UGI0 708 aa29.05■■■□□ 2.24
PBX1-210ENST00000496120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.04■■■□□ 2.24
PBX1-210ENST00000496120 HNRNPUQ00839 825 aaKnown RBP eCLIP29.04■■■□□ 2.24
PBX1-210ENST00000496120 CCDC9Q9Y3X0 531 aaKnown RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms