RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
HDAC9-226ENST00000496026 ARHGEF10O15013 1369 aa20.37■□□□□ 0.85
HDAC9-226ENST00000496026 PNPLA6Q8IY17 1366 aa20.37■□□□□ 0.85
HDAC9-226ENST00000496026 TTC21BQ7Z4L5 1316 aa20.36■□□□□ 0.85
HDAC9-226ENST00000496026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.85
HDAC9-226ENST00000496026 ABTB2Q8N961 1025 aa20.36■□□□□ 0.85
HDAC9-226ENST00000496026 MYOM1P52179 1685 aa20.35■□□□□ 0.85
HDAC9-226ENST00000496026 PLEKHG5O94827 1062 aa20.35■□□□□ 0.85
HDAC9-226ENST00000496026 TRPM3Q9HCF6 1732 aaPredicted RBP20.35■□□□□ 0.85
HDAC9-226ENST00000496026 EDC4Q6P2E9 1401 aaKnown RBP20.35■□□□□ 0.85
HDAC9-226ENST00000496026 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
HDAC9-226ENST00000496026 TTC21AQ8NDW8 1320 aa20.34■□□□□ 0.85
HDAC9-226ENST00000496026 NUTM2GQ5VZR2 741 aa20.34■□□□□ 0.85
HDAC9-226ENST00000496026 PANK3Q9H999 370 aa20.34■□□□□ 0.85
HDAC9-226ENST00000496026 SSH2Q76I76 1423 aa20.34■□□□□ 0.85
HDAC9-226ENST00000496026 SPATA31A6Q5VVP1 1343 aa20.32■□□□□ 0.84
HDAC9-226ENST00000496026 NUTM2BA6NNL0 878 aaPredicted RBP20.32■□□□□ 0.84
HDAC9-226ENST00000496026 NUTM2EB1AL46 878 aaPredicted RBP20.32■□□□□ 0.84
HDAC9-226ENST00000496026 HAP1P54257 671 aaPredicted RBP20.32■□□□□ 0.84
HDAC9-226ENST00000496026 NUTM2AQ8IVF1 878 aaPredicted RBP20.32■□□□□ 0.84
HDAC9-226ENST00000496026 MON2Q7Z3U7 1717 aa20.31■□□□□ 0.84
HDAC9-226ENST00000496026 NLRP6P59044 892 aa20.31■□□□□ 0.84
HDAC9-226ENST00000496026 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
HDAC9-226ENST00000496026 SHPRHQ149N8 1683 aa20.31■□□□□ 0.84
HDAC9-226ENST00000496026 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
HDAC9-226ENST00000496026 NRKQ7Z2Y5 1582 aa20.29■□□□□ 0.84
HDAC9-226ENST00000496026 ALS2Q96Q42 1657 aa20.29■□□□□ 0.84
HDAC9-226ENST00000496026 NSD3Q9BZ95 1437 aa20.29■□□□□ 0.84
HDAC9-226ENST00000496026 NME9Q86XW9 330 aa20.29■□□□□ 0.84
HDAC9-226ENST00000496026 CABLES1Q8TDN4 633 aa20.29■□□□□ 0.84
HDAC9-226ENST00000496026 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
HDAC9-226ENST00000496026 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.83
HDAC9-226ENST00000496026 ZRANB1Q9UGI0 708 aa20.26■□□□□ 0.83
HDAC9-226ENST00000496026 MEX3CQ5U5Q3 659 aaKnown RBP20.25■□□□□ 0.83
HDAC9-226ENST00000496026 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
HDAC9-226ENST00000496026 CGNL1Q0VF96 1302 aa20.25■□□□□ 0.83
HDAC9-226ENST00000496026 PIK3C2AO00443 1686 aa20.24■□□□□ 0.83
HDAC9-226ENST00000496026 ADAMTS2O95450 1211 aa20.24■□□□□ 0.83
HDAC9-226ENST00000496026 COG3Q96JB2 828 aa20.24■□□□□ 0.83
HDAC9-226ENST00000496026 MED1Q15648 1581 aaPredicted RBP20.24■□□□□ 0.83
HDAC9-226ENST00000496026 USP31Q70CQ4 1352 aa20.23■□□□□ 0.83
HDAC9-226ENST00000496026 FYB1O15117 783 aa20.23■□□□□ 0.83
HDAC9-226ENST00000496026 GGNBP2Q9H3C7 697 aa20.23■□□□□ 0.83
HDAC9-226ENST00000496026 USP19O94966 1318 aa20.23■□□□□ 0.83
HDAC9-226ENST00000496026 LRP6O75581 1613 aa20.21■□□□□ 0.83
HDAC9-226ENST00000496026 SOX12O15370 315 aa20.21■□□□□ 0.83
HDAC9-226ENST00000496026 GCP02774 474 aa20.21■□□□□ 0.83
HDAC9-226ENST00000496026 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
HDAC9-226ENST00000496026 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
HDAC9-226ENST00000496026 OVOS2A0A0J9YW53 1432 aa20.19■□□□□ 0.82
HDAC9-226ENST00000496026 OVOS2Q6IE36 1432 aa20.19■□□□□ 0.82
HDAC9-226ENST00000496026 PER1O15534 1290 aaPredicted RBP20.18■□□□□ 0.82
HDAC9-226ENST00000496026 ZC3H6P61129 1189 aaKnown RBP20.18■□□□□ 0.82
HDAC9-226ENST00000496026 C8orf37Q96NL8 207 aa20.18■□□□□ 0.82
HDAC9-226ENST00000496026 SLIT3O75094 1523 aa20.17■□□□□ 0.82
HDAC9-226ENST00000496026 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
HDAC9-226ENST00000496026 NGLY1Q96IV0 654 aa20.16■□□□□ 0.82
HDAC9-226ENST00000496026 PRDM11Q9NQV5 511 aa20.16■□□□□ 0.82
HDAC9-226ENST00000496026 NSD2O96028 1365 aa20.16■□□□□ 0.82
HDAC9-226ENST00000496026 PHRF1Q9P1Y6 1649 aaKnown RBP20.16■□□□□ 0.82
HDAC9-226ENST00000496026 ABCA3Q99758 1704 aa20.16■□□□□ 0.82
HDAC9-226ENST00000496026 KIF20BQ96Q89 1820 aa20.14■□□□□ 0.81
HDAC9-226ENST00000496026 CRYBG1Q9Y4K1 1723 aa20.14■□□□□ 0.81
HDAC9-226ENST00000496026 KIAA0232Q92628 1395 aa20.14■□□□□ 0.81
HDAC9-226ENST00000496026 CNGB1Q14028 1251 aaPredicted RBP20.14■□□□□ 0.81
HDAC9-226ENST00000496026 AMER1Q5JTC6 1135 aaPredicted RBP20.14■□□□□ 0.81
HDAC9-226ENST00000496026 MORC1Q86VD1 984 aa20.13■□□□□ 0.81
HDAC9-226ENST00000496026 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
HDAC9-226ENST00000496026 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
HDAC9-226ENST00000496026 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
HDAC9-226ENST00000496026 CHRNA2Q15822 529 aa20.12■□□□□ 0.81
HDAC9-226ENST00000496026 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
HDAC9-226ENST00000496026 MARF1Q9Y4F3 1742 aaKnown RBP20.12■□□□□ 0.81
HDAC9-226ENST00000496026 CPDO75976 1380 aa20.11■□□□□ 0.81
HDAC9-226ENST00000496026 AFF2P51816 1311 aa20.1■□□□□ 0.81
HDAC9-226ENST00000496026 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
HDAC9-226ENST00000496026 ARHGEF25Q86VW2 580 aa20.1■□□□□ 0.81
HDAC9-226ENST00000496026 NFAT5O94916 1531 aa20.09■□□□□ 0.81
HDAC9-226ENST00000496026 FBLN1P23142 703 aa20.09■□□□□ 0.81
HDAC9-226ENST00000496026 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.81
HDAC9-226ENST00000496026 FNBP4Q8N3X1 1017 aaPredicted RBP20.07■□□□□ 0.8
HDAC9-226ENST00000496026 BTG4Q9NY30 223 aa20.07■□□□□ 0.8
HDAC9-226ENST00000496026 USP21Q9UK80 565 aa20.07■□□□□ 0.8
HDAC9-226ENST00000496026 AMPHP49418 695 aa20.06■□□□□ 0.8
HDAC9-226ENST00000496026 RRS1Q15050 365 aaKnown RBP20.06■□□□□ 0.8
HDAC9-226ENST00000496026 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
HDAC9-226ENST00000496026 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
HDAC9-226ENST00000496026 ZNF772Q68DY9 489 aaPredicted RBP20.05■□□□□ 0.8
HDAC9-226ENST00000496026 COL14A1Q05707 1796 aaKnown RBP20.05■□□□□ 0.8
HDAC9-226ENST00000496026 SLIT2O94813 1529 aa20.04■□□□□ 0.8
HDAC9-226ENST00000496026 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
HDAC9-226ENST00000496026 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
HDAC9-226ENST00000496026 PPM1GO15355 546 aaPredicted RBP20.03■□□□□ 0.8
HDAC9-226ENST00000496026 EVA1CP58658 441 aa20.03■□□□□ 0.8
HDAC9-226ENST00000496026 STRN4Q9NRL3 753 aa20.02■□□□□ 0.8
HDAC9-226ENST00000496026 BCL9LQ86UU0 1499 aa20.01■□□□□ 0.79
HDAC9-226ENST00000496026 IP6K1Q92551 441 aa20.01■□□□□ 0.79
HDAC9-226ENST00000496026 AXIN2Q9Y2T1 843 aa20.01■□□□□ 0.79
HDAC9-226ENST00000496026 EMILIN1Q9Y6C2 1016 aa20.01■□□□□ 0.79
HDAC9-226ENST00000496026 PLCH1Q4KWH8 1693 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms