RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 ZNF772Q68DY9 489 aaPredicted RBP17.5■□□□□ 0.39
MRPL55-233ENST00000495899 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
MRPL55-233ENST00000495899 ARHGEF10O15013 1369 aa17.5■□□□□ 0.39
MRPL55-233ENST00000495899 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
MRPL55-233ENST00000495899 COL22A1Q8NFW1 1626 aaPredicted RBP17.49■□□□□ 0.39
MRPL55-233ENST00000495899 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
MRPL55-233ENST00000495899 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
MRPL55-233ENST00000495899 ACEP12821 1306 aa17.47■□□□□ 0.39
MRPL55-233ENST00000495899 ADAMTS2O95450 1211 aa17.47■□□□□ 0.39
MRPL55-233ENST00000495899 POLA2Q14181 598 aa17.47■□□□□ 0.39
MRPL55-233ENST00000495899 POTEAQ6S8J7 498 aa17.46■□□□□ 0.39
MRPL55-233ENST00000495899 NGLY1Q96IV0 654 aa17.46■□□□□ 0.39
MRPL55-233ENST00000495899 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
MRPL55-233ENST00000495899 CABP1Q9NZU7 370 aa17.46■□□□□ 0.39
MRPL55-233ENST00000495899 PPIP5K1Q6PFW1 1433 aa17.46■□□□□ 0.39
MRPL55-233ENST00000495899 ITSN1Q15811 1721 aa17.45■□□□□ 0.38
MRPL55-233ENST00000495899 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
MRPL55-233ENST00000495899 PUS7Q96PZ0 661 aaKnown RBP17.45■□□□□ 0.38
MRPL55-233ENST00000495899 AFF2P51816 1311 aa17.44■□□□□ 0.38
MRPL55-233ENST00000495899 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
MRPL55-233ENST00000495899 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
MRPL55-233ENST00000495899 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
MRPL55-233ENST00000495899 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
MRPL55-233ENST00000495899 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
MRPL55-233ENST00000495899 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
MRPL55-233ENST00000495899 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
MRPL55-233ENST00000495899 TESK2Q96S53 571 aa17.42■□□□□ 0.38
MRPL55-233ENST00000495899 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
MRPL55-233ENST00000495899 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
MRPL55-233ENST00000495899 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
MRPL55-233ENST00000495899 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
MRPL55-233ENST00000495899 USP47Q96K76 1375 aa17.4■□□□□ 0.38
MRPL55-233ENST00000495899 SOCS7O14512 581 aa17.39■□□□□ 0.37
MRPL55-233ENST00000495899 ABCB7O75027 752 aa17.38■□□□□ 0.37
MRPL55-233ENST00000495899 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
MRPL55-233ENST00000495899 USP21Q9UK80 565 aa17.38■□□□□ 0.37
MRPL55-233ENST00000495899 RXRBP28702 533 aa17.37■□□□□ 0.37
MRPL55-233ENST00000495899 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
MRPL55-233ENST00000495899 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
MRPL55-233ENST00000495899 USP6P35125 1406 aa17.36■□□□□ 0.37
MRPL55-233ENST00000495899 TMF1P82094 1093 aa17.35■□□□□ 0.37
MRPL55-233ENST00000495899 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
MRPL55-233ENST00000495899 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
MRPL55-233ENST00000495899 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
MRPL55-233ENST00000495899 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
MRPL55-233ENST00000495899 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
MRPL55-233ENST00000495899 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
MRPL55-233ENST00000495899 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.37
MRPL55-233ENST00000495899 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
MRPL55-233ENST00000495899 DSG3P32926 999 aa17.33■□□□□ 0.36
MRPL55-233ENST00000495899 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
MRPL55-233ENST00000495899 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
MRPL55-233ENST00000495899 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
MRPL55-233ENST00000495899 FKBP8Q14318 412 aa17.32■□□□□ 0.36
MRPL55-233ENST00000495899 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
MRPL55-233ENST00000495899 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
MRPL55-233ENST00000495899 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
MRPL55-233ENST00000495899 SLIT2O94813 1529 aa17.31■□□□□ 0.36
MRPL55-233ENST00000495899 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
MRPL55-233ENST00000495899 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
MRPL55-233ENST00000495899 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
MRPL55-233ENST00000495899 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
MRPL55-233ENST00000495899 USP19O94966 1318 aa17.3■□□□□ 0.36
MRPL55-233ENST00000495899 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
MRPL55-233ENST00000495899 NLRP6P59044 892 aa17.3■□□□□ 0.36
MRPL55-233ENST00000495899 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-233ENST00000495899 ATRNO75882 1429 aa17.3■□□□□ 0.36
MRPL55-233ENST00000495899 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
MRPL55-233ENST00000495899 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
MRPL55-233ENST00000495899 GCP02774 474 aa17.28■□□□□ 0.36
MRPL55-233ENST00000495899 GJD4Q96KN9 370 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-233ENST00000495899 PRDM11Q9NQV5 511 aa17.28■□□□□ 0.36
MRPL55-233ENST00000495899 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
MRPL55-233ENST00000495899 ABCA3Q99758 1704 aa17.27■□□□□ 0.35
MRPL55-233ENST00000495899 VPS72Q15906 364 aa17.26■□□□□ 0.35
MRPL55-233ENST00000495899 BTG4Q9NY30 223 aa17.26■□□□□ 0.35
MRPL55-233ENST00000495899 CPDO75976 1380 aa17.26■□□□□ 0.35
MRPL55-233ENST00000495899 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
MRPL55-233ENST00000495899 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
MRPL55-233ENST00000495899 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
MRPL55-233ENST00000495899 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
MRPL55-233ENST00000495899 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
MRPL55-233ENST00000495899 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
MRPL55-233ENST00000495899 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
MRPL55-233ENST00000495899 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
MRPL55-233ENST00000495899 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
MRPL55-233ENST00000495899 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
MRPL55-233ENST00000495899 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
MRPL55-233ENST00000495899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
MRPL55-233ENST00000495899 COL14A1Q05707 1796 aaKnown RBP17.22■□□□□ 0.35
MRPL55-233ENST00000495899 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
MRPL55-233ENST00000495899 NWD2Q9ULI1 1742 aa17.21■□□□□ 0.35
MRPL55-233ENST00000495899 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
MRPL55-233ENST00000495899 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
MRPL55-233ENST00000495899 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-233ENST00000495899 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
MRPL55-233ENST00000495899 SLIT3O75094 1523 aa17.21■□□□□ 0.34
MRPL55-233ENST00000495899 ONECUT3O60422 494 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-233ENST00000495899 NRKQ7Z2Y5 1582 aa17.19■□□□□ 0.34
MRPL55-233ENST00000495899 NME9Q86XW9 330 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms