RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 DDX10Q13206 875 aaKnown RBP13.03□□□□□ -0.32
ACTN4-207ENST00000495553 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-207ENST00000495553 SLC12A5Q9H2X9 1139 aa13.02□□□□□ -0.33
ACTN4-207ENST00000495553 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
ACTN4-207ENST00000495553 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
ACTN4-207ENST00000495553 RGPD8O14715 1765 aaPredicted RBP13□□□□□ -0.33
ACTN4-207ENST00000495553 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
ACTN4-207ENST00000495553 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
ACTN4-207ENST00000495553 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
ACTN4-207ENST00000495553 KTN1Q86UP2 1357 aaKnown RBP12.99□□□□□ -0.33
ACTN4-207ENST00000495553 NUTM2GQ5VZR2 741 aa12.99□□□□□ -0.33
ACTN4-207ENST00000495553 DIEXFQ68CQ4 756 aaKnown RBP12.99□□□□□ -0.33
ACTN4-207ENST00000495553 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
ACTN4-207ENST00000495553 C8orf37Q96NL8 207 aa12.99□□□□□ -0.33
ACTN4-207ENST00000495553 USP6P35125 1406 aa12.98□□□□□ -0.33
ACTN4-207ENST00000495553 NGLY1Q96IV0 654 aa12.98□□□□□ -0.33
ACTN4-207ENST00000495553 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
ACTN4-207ENST00000495553 SHPRHQ149N8 1683 aa12.98□□□□□ -0.33
ACTN4-207ENST00000495553 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
ACTN4-207ENST00000495553 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
ACTN4-207ENST00000495553 NLRP13Q86W25 1043 aa12.97□□□□□ -0.33
ACTN4-207ENST00000495553 PANK3Q9H999 370 aa12.97□□□□□ -0.33
ACTN4-207ENST00000495553 LRP6O75581 1613 aa12.97□□□□□ -0.33
ACTN4-207ENST00000495553 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.33
ACTN4-207ENST00000495553 ANKRD36BQ8N2N9 1353 aa12.96□□□□□ -0.33
ACTN4-207ENST00000495553 NLRP6P59044 892 aa12.96□□□□□ -0.33
ACTN4-207ENST00000495553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.96□□□□□ -0.33
ACTN4-207ENST00000495553 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
ACTN4-207ENST00000495553 ZNF772Q68DY9 489 aaPredicted RBP12.95□□□□□ -0.34
ACTN4-207ENST00000495553 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
ACTN4-207ENST00000495553 AFF2P51816 1311 aa12.94□□□□□ -0.34
ACTN4-207ENST00000495553 ANP32CO43423 234 aa12.94□□□□□ -0.34
ACTN4-207ENST00000495553 RGS17Q9UGC6 210 aaPredicted RBP12.93□□□□□ -0.34
ACTN4-207ENST00000495553 SSH2Q76I76 1423 aa12.93□□□□□ -0.34
ACTN4-207ENST00000495553 MYOM1P52179 1685 aa12.93□□□□□ -0.34
ACTN4-207ENST00000495553 CGNL1Q0VF96 1302 aa12.92□□□□□ -0.34
ACTN4-207ENST00000495553 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
ACTN4-207ENST00000495553 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
ACTN4-207ENST00000495553 USP21Q9UK80 565 aa12.92□□□□□ -0.34
ACTN4-207ENST00000495553 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
ACTN4-207ENST00000495553 TRPM3Q9HCF6 1732 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-207ENST00000495553 GCP02774 474 aa12.91□□□□□ -0.34
ACTN4-207ENST00000495553 ZC3H6P61129 1189 aaKnown RBP12.91□□□□□ -0.34
ACTN4-207ENST00000495553 NME9Q86XW9 330 aa12.91□□□□□ -0.34
ACTN4-207ENST00000495553 FNBP4Q8N3X1 1017 aaPredicted RBP12.91□□□□□ -0.34
ACTN4-207ENST00000495553 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
ACTN4-207ENST00000495553 USP19O94966 1318 aa12.9□□□□□ -0.34
ACTN4-207ENST00000495553 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
ACTN4-207ENST00000495553 SOX12O15370 315 aa12.9□□□□□ -0.34
ACTN4-207ENST00000495553 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
ACTN4-207ENST00000495553 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
ACTN4-207ENST00000495553 NSD3Q9BZ95 1437 aa12.89□□□□□ -0.35
ACTN4-207ENST00000495553 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
ACTN4-207ENST00000495553 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
ACTN4-207ENST00000495553 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
ACTN4-207ENST00000495553 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
ACTN4-207ENST00000495553 UNC5CLQ8IV45 518 aa12.88□□□□□ -0.35
ACTN4-207ENST00000495553 COG3Q96JB2 828 aa12.88□□□□□ -0.35
ACTN4-207ENST00000495553 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
ACTN4-207ENST00000495553 NSD2O96028 1365 aa12.88□□□□□ -0.35
ACTN4-207ENST00000495553 KIAA0232Q92628 1395 aa12.88□□□□□ -0.35
ACTN4-207ENST00000495553 USP31Q70CQ4 1352 aa12.87□□□□□ -0.35
ACTN4-207ENST00000495553 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
ACTN4-207ENST00000495553 RXRBP28702 533 aa12.87□□□□□ -0.35
ACTN4-207ENST00000495553 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
ACTN4-207ENST00000495553 CARD14Q9BXL6 1004 aa12.87□□□□□ -0.35
ACTN4-207ENST00000495553 BTG4Q9NY30 223 aa12.87□□□□□ -0.35
ACTN4-207ENST00000495553 PER1O15534 1290 aaPredicted RBP12.86□□□□□ -0.35
ACTN4-207ENST00000495553 RALBP1Q15311 655 aa12.86□□□□□ -0.35
ACTN4-207ENST00000495553 CCDC9Q9Y3X0 531 aaKnown RBP12.86□□□□□ -0.35
ACTN4-207ENST00000495553 CPDO75976 1380 aa12.85□□□□□ -0.35
ACTN4-207ENST00000495553 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
ACTN4-207ENST00000495553 FYB1O15117 783 aa12.85□□□□□ -0.35
ACTN4-207ENST00000495553 EVA1CP58658 441 aa12.85□□□□□ -0.35
ACTN4-207ENST00000495553 CNGB1Q14028 1251 aaPredicted RBP12.85□□□□□ -0.35
ACTN4-207ENST00000495553 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
ACTN4-207ENST00000495553 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
ACTN4-207ENST00000495553 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
ACTN4-207ENST00000495553 ILDR2Q71H61 639 aa12.84□□□□□ -0.35
ACTN4-207ENST00000495553 MORC1Q86VD1 984 aa12.84□□□□□ -0.35
ACTN4-207ENST00000495553 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
ACTN4-207ENST00000495553 BCL9LQ86UU0 1499 aa12.84□□□□□ -0.35
ACTN4-207ENST00000495553 SLIT2O94813 1529 aa12.83□□□□□ -0.35
ACTN4-207ENST00000495553 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
ACTN4-207ENST00000495553 ARHGEF25Q86VW2 580 aa12.83□□□□□ -0.36
ACTN4-207ENST00000495553 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
ACTN4-207ENST00000495553 NRKQ7Z2Y5 1582 aa12.82□□□□□ -0.36
ACTN4-207ENST00000495553 VPS72Q15906 364 aa12.82□□□□□ -0.36
ACTN4-207ENST00000495553 GJD4Q96KN9 370 aaPredicted RBP12.82□□□□□ -0.36
ACTN4-207ENST00000495553 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
ACTN4-207ENST00000495553 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
ACTN4-207ENST00000495553 SLIT3O75094 1523 aa12.82□□□□□ -0.36
ACTN4-207ENST00000495553 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
ACTN4-207ENST00000495553 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
ACTN4-207ENST00000495553 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
ACTN4-207ENST00000495553 ATRNO75882 1429 aa12.8□□□□□ -0.36
ACTN4-207ENST00000495553 ABCA3Q99758 1704 aa12.79□□□□□ -0.36
ACTN4-207ENST00000495553 KIF20BQ96Q89 1820 aa12.79□□□□□ -0.36
ACTN4-207ENST00000495553 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
ACTN4-207ENST00000495553 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms