RNA–Protein interactions for RNA: ENST00000495175.6

TRIT1-213, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best)

Gene TRIT1, Length 1,156 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-213ENST00000495175 TNS3Q68CZ2 1445 aa15.55■□□□□ 0.08
TRIT1-213ENST00000495175 KRT28Q7Z3Y7 464 aa15.55■□□□□ 0.08
TRIT1-213ENST00000495175 USP54Q70EL1 1684 aa15.54■□□□□ 0.08
TRIT1-213ENST00000495175 MED1Q15648 1581 aaPredicted RBP15.54■□□□□ 0.08
TRIT1-213ENST00000495175 PNPLA6Q8IY17 1366 aa15.54■□□□□ 0.08
TRIT1-213ENST00000495175 ANKRD36BQ8N2N9 1353 aa15.54■□□□□ 0.08
TRIT1-213ENST00000495175 SPATA31A3Q5VYP0 1347 aa15.54■□□□□ 0.08
TRIT1-213ENST00000495175 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
TRIT1-213ENST00000495175 BRD4O60885 1362 aaPredicted RBP15.53■□□□□ 0.08
TRIT1-213ENST00000495175 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
TRIT1-213ENST00000495175 EDC4Q6P2E9 1401 aaKnown RBP15.51■□□□□ 0.07
TRIT1-213ENST00000495175 KTN1Q86UP2 1357 aaKnown RBP15.5■□□□□ 0.07
TRIT1-213ENST00000495175 JCADQ9P266 1359 aa15.5■□□□□ 0.07
TRIT1-213ENST00000495175 PSME1Q06323 249 aa15.5■□□□□ 0.07
TRIT1-213ENST00000495175 TMC1Q8TDI8 760 aa15.5■□□□□ 0.07
TRIT1-213ENST00000495175 LRRC59Q96AG4 307 aaKnown RBP15.5■□□□□ 0.07
TRIT1-213ENST00000495175 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
TRIT1-213ENST00000495175 CARD14Q9BXL6 1004 aa15.5■□□□□ 0.07
TRIT1-213ENST00000495175 TTC21BQ7Z4L5 1316 aa15.49■□□□□ 0.07
TRIT1-213ENST00000495175 LRP6O75581 1613 aa15.49■□□□□ 0.07
TRIT1-213ENST00000495175 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
TRIT1-213ENST00000495175 TERF2IPQ9NYB0 399 aa15.48■□□□□ 0.07
TRIT1-213ENST00000495175 SLIT3O75094 1523 aa15.47■□□□□ 0.07
TRIT1-213ENST00000495175 ARHGEF10O15013 1369 aa15.47■□□□□ 0.07
TRIT1-213ENST00000495175 USP19O94966 1318 aa15.46■□□□□ 0.07
TRIT1-213ENST00000495175 OVOS2A0A0J9YW53 1432 aa15.46■□□□□ 0.07
TRIT1-213ENST00000495175 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
TRIT1-213ENST00000495175 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
TRIT1-213ENST00000495175 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
TRIT1-213ENST00000495175 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
TRIT1-213ENST00000495175 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
TRIT1-213ENST00000495175 TTC21AQ8NDW8 1320 aa15.45■□□□□ 0.06
TRIT1-213ENST00000495175 PER1O15534 1290 aaPredicted RBP15.44■□□□□ 0.06
TRIT1-213ENST00000495175 POLR3GLQ9BT43 218 aa15.44■□□□□ 0.06
TRIT1-213ENST00000495175 PANK3Q9H999 370 aa15.44■□□□□ 0.06
TRIT1-213ENST00000495175 NME9Q86XW9 330 aa15.43■□□□□ 0.06
TRIT1-213ENST00000495175 ANKRD26Q9UPS8 1709 aa15.43■□□□□ 0.06
TRIT1-213ENST00000495175 NFAT5O94916 1531 aa15.43■□□□□ 0.06
TRIT1-213ENST00000495175 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
TRIT1-213ENST00000495175 ZRANB1Q9UGI0 708 aa15.42■□□□□ 0.06
TRIT1-213ENST00000495175 FYB1O15117 783 aa15.41■□□□□ 0.06
TRIT1-213ENST00000495175 PAK3O75914 559 aaPredicted RBP15.41■□□□□ 0.06
TRIT1-213ENST00000495175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRIT1-213ENST00000495175 ABTB2Q8N961 1025 aa15.4■□□□□ 0.06
TRIT1-213ENST00000495175 CABLES1Q8TDN4 633 aa15.4■□□□□ 0.06
TRIT1-213ENST00000495175 NUTM2GQ5VZR2 741 aa15.39■□□□□ 0.05
TRIT1-213ENST00000495175 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
TRIT1-213ENST00000495175 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
TRIT1-213ENST00000495175 COL18A1P39060 1754 aa15.37■□□□□ 0.05
TRIT1-213ENST00000495175 LMO7Q8WWI1 1683 aa15.37■□□□□ 0.05
TRIT1-213ENST00000495175 NLRP6P59044 892 aa15.36■□□□□ 0.05
TRIT1-213ENST00000495175 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
TRIT1-213ENST00000495175 NLRP13Q86W25 1043 aa15.36■□□□□ 0.05
TRIT1-213ENST00000495175 CPDO75976 1380 aa15.36■□□□□ 0.05
TRIT1-213ENST00000495175 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
TRIT1-213ENST00000495175 GGNBP2Q9H3C7 697 aa15.35■□□□□ 0.05
TRIT1-213ENST00000495175 CGNL1Q0VF96 1302 aa15.35■□□□□ 0.05
TRIT1-213ENST00000495175 NSD2O96028 1365 aa15.35■□□□□ 0.05
TRIT1-213ENST00000495175 PLCH1Q4KWH8 1693 aa15.35■□□□□ 0.05
TRIT1-213ENST00000495175 GCP02774 474 aa15.34■□□□□ 0.05
TRIT1-213ENST00000495175 NRAPQ86VF7 1730 aa15.34■□□□□ 0.05
TRIT1-213ENST00000495175 LTN1O94822 1766 aa15.34■□□□□ 0.05
TRIT1-213ENST00000495175 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
TRIT1-213ENST00000495175 SLIT2O94813 1529 aa15.33■□□□□ 0.05
TRIT1-213ENST00000495175 ABCC6O95255 1503 aa15.33■□□□□ 0.04
TRIT1-213ENST00000495175 PEAK1Q9H792 1746 aa15.32■□□□□ 0.04
TRIT1-213ENST00000495175 NUTM2BA6NNL0 878 aaPredicted RBP15.32■□□□□ 0.04
TRIT1-213ENST00000495175 NUTM2EB1AL46 878 aaPredicted RBP15.32■□□□□ 0.04
TRIT1-213ENST00000495175 NUTM2AQ8IVF1 878 aaPredicted RBP15.32■□□□□ 0.04
TRIT1-213ENST00000495175 KIAA0232Q92628 1395 aa15.32■□□□□ 0.04
TRIT1-213ENST00000495175 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.31■□□□□ 0.04
TRIT1-213ENST00000495175 NWD2Q9ULI1 1742 aa15.31■□□□□ 0.04
TRIT1-213ENST00000495175 ADAMTS2O95450 1211 aa15.3■□□□□ 0.04
TRIT1-213ENST00000495175 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
TRIT1-213ENST00000495175 BCL9LQ86UU0 1499 aa15.3■□□□□ 0.04
TRIT1-213ENST00000495175 ARHGEF25Q86VW2 580 aa15.3■□□□□ 0.04
TRIT1-213ENST00000495175 COG3Q96JB2 828 aa15.3■□□□□ 0.04
TRIT1-213ENST00000495175 KNSTRNQ9Y448 316 aa15.3■□□□□ 0.04
TRIT1-213ENST00000495175 CAMTA1Q9Y6Y1 1673 aa15.29■□□□□ 0.04
TRIT1-213ENST00000495175 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
TRIT1-213ENST00000495175 AATKQ6ZMQ8 1374 aa15.29■□□□□ 0.04
TRIT1-213ENST00000495175 FAM83GA6ND36 823 aa15.29■□□□□ 0.04
TRIT1-213ENST00000495175 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
TRIT1-213ENST00000495175 FBLN1P23142 703 aa15.29■□□□□ 0.04
TRIT1-213ENST00000495175 FNBP4Q8N3X1 1017 aaPredicted RBP15.29■□□□□ 0.04
TRIT1-213ENST00000495175 KCNH5Q8NCM2 988 aa15.29■□□□□ 0.04
TRIT1-213ENST00000495175 RGS17Q9UGC6 210 aaPredicted RBP15.28■□□□□ 0.04
TRIT1-213ENST00000495175 RGPD5Q99666 1765 aa15.28■□□□□ 0.04
TRIT1-213ENST00000495175 ZC3H6P61129 1189 aaKnown RBP15.27■□□□□ 0.04
TRIT1-213ENST00000495175 MAP2P11137 1827 aaKnown RBP15.27■□□□□ 0.03
TRIT1-213ENST00000495175 MAP3K19Q56UN5 1328 aa15.26■□□□□ 0.03
TRIT1-213ENST00000495175 CHRNA2Q15822 529 aa15.25■□□□□ 0.03
TRIT1-213ENST00000495175 C8orf37Q96NL8 207 aa15.25■□□□□ 0.03
TRIT1-213ENST00000495175 AXIN2Q9Y2T1 843 aa15.25■□□□□ 0.03
TRIT1-213ENST00000495175 COL5A2P05997 1499 aaPredicted RBP15.25■□□□□ 0.03
TRIT1-213ENST00000495175 PARD3Q8TEW0 1356 aa15.24■□□□□ 0.03
TRIT1-213ENST00000495175 AFF2P51816 1311 aa15.24■□□□□ 0.03
TRIT1-213ENST00000495175 SOX12O15370 315 aa15.24■□□□□ 0.03
TRIT1-213ENST00000495175 CC2D1BQ5T0F9 858 aaKnown RBP15.24■□□□□ 0.03
TRIT1-213ENST00000495175 PRDM11Q9NQV5 511 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms