RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
SUPT20H-222ENST00000495071 IFT172Q9UG01 1749 aa16.93■□□□□ 0.3
SUPT20H-222ENST00000495071 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
SUPT20H-222ENST00000495071 NLRP1Q9C000 1473 aa16.92■□□□□ 0.3
SUPT20H-222ENST00000495071 ZMYM3Q14202 1370 aa16.92■□□□□ 0.3
SUPT20H-222ENST00000495071 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
SUPT20H-222ENST00000495071 KIF16BQ96L93 1317 aa16.92■□□□□ 0.3
SUPT20H-222ENST00000495071 FYB1O15117 783 aa16.91■□□□□ 0.3
SUPT20H-222ENST00000495071 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
SUPT20H-222ENST00000495071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.91■□□□□ 0.39e-7■■□□□ 13.4
SUPT20H-222ENST00000495071 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
SUPT20H-222ENST00000495071 CHMP5Q9NZZ3 219 aa16.91■□□□□ 0.3
SUPT20H-222ENST00000495071 POGZQ7Z3K3 1410 aa16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 MCM4P33991 863 aa16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 TULP4Q9NRJ4 1543 aa16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 HSP90AA1P07900 732 aaKnown RBP16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 GLI2P10070 1586 aa16.89■□□□□ 0.29
SUPT20H-222ENST00000495071 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
SUPT20H-222ENST00000495071 FAM43AQ8N2R8 423 aa16.88■□□□□ 0.29
SUPT20H-222ENST00000495071 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
SUPT20H-222ENST00000495071 CABP1Q9NZU7 370 aa16.87■□□□□ 0.29
SUPT20H-222ENST00000495071 PPLO60437 1756 aa16.87■□□□□ 0.29
SUPT20H-222ENST00000495071 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
SUPT20H-222ENST00000495071 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
SUPT20H-222ENST00000495071 IL16Q14005 1332 aa16.87■□□□□ 0.29
SUPT20H-222ENST00000495071 ZBTB40Q9NUA8 1239 aa16.86■□□□□ 0.29
SUPT20H-222ENST00000495071 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
SUPT20H-222ENST00000495071 SLC52A1Q9NWF4 448 aa16.86■□□□□ 0.29
SUPT20H-222ENST00000495071 HSP90AB1P08238 724 aaKnown RBP16.86■□□□□ 0.29
SUPT20H-222ENST00000495071 HMOX1P09601 288 aa16.86■□□□□ 0.29
SUPT20H-222ENST00000495071 FBLN1P23142 703 aa16.86■□□□□ 0.29
SUPT20H-222ENST00000495071 ABCC3O15438 1527 aa16.86■□□□□ 0.29
SUPT20H-222ENST00000495071 CDK19Q9BWU1 502 aa16.85■□□□□ 0.29
SUPT20H-222ENST00000495071 MLH3Q9UHC1 1453 aa16.85■□□□□ 0.29
SUPT20H-222ENST00000495071 C1orf115Q9H7X2 142 aa16.84■□□□□ 0.29
SUPT20H-222ENST00000495071 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
SUPT20H-222ENST00000495071 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
SUPT20H-222ENST00000495071 TRAK2O60296 914 aa16.84■□□□□ 0.29
SUPT20H-222ENST00000495071 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
SUPT20H-222ENST00000495071 ZC3H13Q5T200 1668 aaKnown RBP16.83■□□□□ 0.29
SUPT20H-222ENST00000495071 FCHSD2O94868 740 aa16.83■□□□□ 0.28
SUPT20H-222ENST00000495071 NUCB1Q02818 461 aa16.82■□□□□ 0.28
SUPT20H-222ENST00000495071 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
SUPT20H-222ENST00000495071 CHMP4BQ9H444 224 aaKnown RBP16.81■□□□□ 0.28
SUPT20H-222ENST00000495071 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
SUPT20H-222ENST00000495071 FOXD4L1Q9NU39 408 aa16.81■□□□□ 0.28
SUPT20H-222ENST00000495071 HECW2Q9P2P5 1572 aa16.81■□□□□ 0.28
SUPT20H-222ENST00000495071 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
SUPT20H-222ENST00000495071 DDX11L8A8MPP1 907 aa16.8■□□□□ 0.28
SUPT20H-222ENST00000495071 ADGRB2O60241 1585 aa16.8■□□□□ 0.28
SUPT20H-222ENST00000495071 NEXMIFQ5QGS0 1516 aa16.79■□□□□ 0.28
SUPT20H-222ENST00000495071 XRCC6P12956 609 aaKnown RBP eCLIP16.78■□□□□ 0.28
SUPT20H-222ENST00000495071 FBXO31Q5XUX0 539 aaPredicted RBP16.78■□□□□ 0.28
SUPT20H-222ENST00000495071 ARHGEF28Q8N1W1 1705 aaKnown RBP16.78■□□□□ 0.28
SUPT20H-222ENST00000495071 CAMSAP1Q5T5Y3 1602 aa16.77■□□□□ 0.28
SUPT20H-222ENST00000495071 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.28
SUPT20H-222ENST00000495071 NFE2L2Q16236 605 aa16.77■□□□□ 0.28
SUPT20H-222ENST00000495071 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.28
SUPT20H-222ENST00000495071 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.27
SUPT20H-222ENST00000495071 OSCARQ8IYS5 282 aa16.77■□□□□ 0.27
SUPT20H-222ENST00000495071 RSPH6AQ9H0K4 717 aa16.77■□□□□ 0.27
SUPT20H-222ENST00000495071 POLKQ9UBT6 870 aa16.77■□□□□ 0.27
SUPT20H-222ENST00000495071 GNAI1P63096 354 aa16.76■□□□□ 0.27
SUPT20H-222ENST00000495071 PANK2Q9BZ23 570 aa16.76■□□□□ 0.27
SUPT20H-222ENST00000495071 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
SUPT20H-222ENST00000495071 GCC1Q96CN9 775 aa16.76■□□□□ 0.27
SUPT20H-222ENST00000495071 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
SUPT20H-222ENST00000495071 GBP4Q96PP9 640 aa16.76■□□□□ 0.27
SUPT20H-222ENST00000495071 BMP2KLQ5H9B9 411 aa16.75■□□□□ 0.27
SUPT20H-222ENST00000495071 EMILIN1Q9Y6C2 1016 aa16.75■□□□□ 0.27
SUPT20H-222ENST00000495071 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
SUPT20H-222ENST00000495071 VAMP4O75379 141 aa16.74■□□□□ 0.27
SUPT20H-222ENST00000495071 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
SUPT20H-222ENST00000495071 ZBTB7BO15156 539 aaPredicted RBP16.74■□□□□ 0.27
SUPT20H-222ENST00000495071 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
SUPT20H-222ENST00000495071 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
SUPT20H-222ENST00000495071 RRAGDQ9NQL2 400 aaPredicted RBP16.74■□□□□ 0.27
SUPT20H-222ENST00000495071 MRPL50Q8N5N7 158 aaKnown RBP16.73■□□□□ 0.27
SUPT20H-222ENST00000495071 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
SUPT20H-222ENST00000495071 MRE11P49959 708 aa16.72■□□□□ 0.27
SUPT20H-222ENST00000495071 TNPO1Q92973 898 aaKnown RBP16.72■□□□□ 0.27
SUPT20H-222ENST00000495071 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
SUPT20H-222ENST00000495071 SNX21Q969T3 373 aa16.72■□□□□ 0.27
SUPT20H-222ENST00000495071 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
SUPT20H-222ENST00000495071 PNPLA6Q8IY17 1366 aa16.71■□□□□ 0.27
SUPT20H-222ENST00000495071 IFT57Q9NWB7 429 aa16.71■□□□□ 0.27
SUPT20H-222ENST00000495071 PTPRMP28827 1452 aa16.71■□□□□ 0.27
SUPT20H-222ENST00000495071 LMOD3Q0VAK6 560 aa16.71■□□□□ 0.27
SUPT20H-222ENST00000495071 NME9Q86XW9 330 aa16.71■□□□□ 0.27
SUPT20H-222ENST00000495071 SIGLEC1Q9BZZ2 1709 aa16.71■□□□□ 0.27
SUPT20H-222ENST00000495071 FSD2A1L4K1 749 aa16.71■□□□□ 0.26
SUPT20H-222ENST00000495071 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.26
SUPT20H-222ENST00000495071 APBB1O00213 710 aa16.7■□□□□ 0.26
SUPT20H-222ENST00000495071 ARHGAP45Q92619 1136 aa16.7■□□□□ 0.26
SUPT20H-222ENST00000495071 RRS1Q15050 365 aaKnown RBP16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 ARHGAP31Q2M1Z3 1444 aa16.69■□□□□ 0.26
SUPT20H-222ENST00000495071 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms