RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 PNPLA6Q8IY17 1366 aa22.4■■□□□ 1.18
GABBR1-220ENST00000494877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.39■■□□□ 1.18
GABBR1-220ENST00000494877 ADGRB2O60241 1585 aa22.39■■□□□ 1.17
GABBR1-220ENST00000494877 LTKP29376 864 aa22.39■■□□□ 1.17
GABBR1-220ENST00000494877 NUDT16Q96DE0 195 aaKnown RBP22.39■■□□□ 1.17
GABBR1-220ENST00000494877 EDC4Q6P2E9 1401 aaKnown RBP22.38■■□□□ 1.17
GABBR1-220ENST00000494877 CCDC61Q9Y6R9 512 aa22.38■■□□□ 1.17
GABBR1-220ENST00000494877 U2SURPO15042 1029 aaKnown RBP22.37■■□□□ 1.17
GABBR1-220ENST00000494877 DIAPH1O60610 1272 aaKnown RBP22.36■■□□□ 1.17
GABBR1-220ENST00000494877 BCAR3O75815 825 aa22.36■■□□□ 1.17
GABBR1-220ENST00000494877 PLEKHF1Q96S99 279 aa22.36■■□□□ 1.17
GABBR1-220ENST00000494877 EID1Q9Y6B2 187 aa22.36■■□□□ 1.17
GABBR1-220ENST00000494877 ROBO2Q9HCK4 1378 aa22.36■■□□□ 1.17
GABBR1-220ENST00000494877 CDC42BPGQ6DT37 1551 aa22.34■■□□□ 1.17
GABBR1-220ENST00000494877 RIMS1Q86UR5 1692 aaKnown RBP22.33■■□□□ 1.17
GABBR1-220ENST00000494877 PNNQ9H307 717 aaKnown RBP22.33■■□□□ 1.16
GABBR1-220ENST00000494877 SLIT1O75093 1534 aa22.33■■□□□ 1.16
GABBR1-220ENST00000494877 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
GABBR1-220ENST00000494877 MYH16Q9H6N6 1097 aa22.32■■□□□ 1.16
GABBR1-220ENST00000494877 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
GABBR1-220ENST00000494877 ARHGAP23Q9P227 1491 aa22.32■■□□□ 1.16
GABBR1-220ENST00000494877 MAPK8IP3Q9UPT6 1336 aa22.31■■□□□ 1.16
GABBR1-220ENST00000494877 TMPOP42166 694 aaKnown RBP22.31■■□□□ 1.16
GABBR1-220ENST00000494877 ZNF692Q9BU19 519 aaPredicted RBP22.31■■□□□ 1.16
GABBR1-220ENST00000494877 MON2Q7Z3U7 1717 aa22.3■■□□□ 1.16
GABBR1-220ENST00000494877 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
GABBR1-220ENST00000494877 PDE3AQ14432 1141 aa22.3■■□□□ 1.16
GABBR1-220ENST00000494877 MAP2P11137 1827 aaKnown RBP22.29■■□□□ 1.16
GABBR1-220ENST00000494877 PRR36Q9H6K5 1346 aa22.29■■□□□ 1.16
GABBR1-220ENST00000494877 NCKAP5LQ9HCH0 1330 aa22.29■■□□□ 1.16
GABBR1-220ENST00000494877 AKAP12Q02952 1782 aa22.28■■□□□ 1.16
GABBR1-220ENST00000494877 NME9Q86XW9 330 aa22.28■■□□□ 1.16
GABBR1-220ENST00000494877 SLC26A8Q96RN1 970 aa22.28■■□□□ 1.16
GABBR1-220ENST00000494877 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.28■■□□□ 1.16
GABBR1-220ENST00000494877 KDM2BQ8NHM5 1336 aa22.28■■□□□ 1.16
GABBR1-220ENST00000494877 FCHSD2O94868 740 aa22.27■■□□□ 1.16
GABBR1-220ENST00000494877 RARSP54136 660 aaKnown RBP22.27■■□□□ 1.16
GABBR1-220ENST00000494877 ITSN1Q15811 1721 aa22.27■■□□□ 1.16
GABBR1-220ENST00000494877 TBX22Q9Y458 520 aa22.27■■□□□ 1.16
GABBR1-220ENST00000494877 AATKQ6ZMQ8 1374 aa22.27■■□□□ 1.16
GABBR1-220ENST00000494877 ADAMTSL3P82987 1691 aa22.26■■□□□ 1.15
GABBR1-220ENST00000494877 PTPRUQ92729 1446 aa22.26■■□□□ 1.15
GABBR1-220ENST00000494877 PPM1GO15355 546 aaPredicted RBP22.26■■□□□ 1.15
GABBR1-220ENST00000494877 MS4A1P11836 297 aa22.26■■□□□ 1.15
GABBR1-220ENST00000494877 FBLN1P23142 703 aa22.26■■□□□ 1.15
GABBR1-220ENST00000494877 CENPQQ7L2Z9 268 aaPredicted RBP22.26■■□□□ 1.15
GABBR1-220ENST00000494877 COG3Q96JB2 828 aa22.25■■□□□ 1.15
GABBR1-220ENST00000494877 TRIM35Q9UPQ4 493 aa22.25■■□□□ 1.15
GABBR1-220ENST00000494877 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
GABBR1-220ENST00000494877 IL16Q14005 1332 aa22.23■■□□□ 1.15
GABBR1-220ENST00000494877 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
GABBR1-220ENST00000494877 ZRANB1Q9UGI0 708 aa22.23■■□□□ 1.15
GABBR1-220ENST00000494877 CDK12Q9NYV4 1490 aaPredicted RBP22.22■■□□□ 1.15
GABBR1-220ENST00000494877 PLEKHG3A1L390 1219 aa22.22■■□□□ 1.15
GABBR1-220ENST00000494877 RIPK4P57078 832 aa22.22■■□□□ 1.15
GABBR1-220ENST00000494877 AMOTL2Q9Y2J4 779 aa22.22■■□□□ 1.15
GABBR1-220ENST00000494877 RSPH6AQ9H0K4 717 aa22.21■■□□□ 1.15
GABBR1-220ENST00000494877 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
GABBR1-220ENST00000494877 TOPAZ1Q8N9V7 1692 aa22.21■■□□□ 1.15
GABBR1-220ENST00000494877 MSH5O43196 834 aa22.21■■□□□ 1.15
GABBR1-220ENST00000494877 DIP2AQ14689 1571 aa22.2■■□□□ 1.14
GABBR1-220ENST00000494877 PTCH1Q13635 1447 aa22.2■■□□□ 1.14
GABBR1-220ENST00000494877 LRRC7Q96NW7 1537 aa22.2■■□□□ 1.14
GABBR1-220ENST00000494877 NEFMP07197 916 aa22.2■■□□□ 1.14
GABBR1-220ENST00000494877 CEP170BQ9Y4F5 1589 aaPredicted RBP22.19■■□□□ 1.14
GABBR1-220ENST00000494877 IL13P35225 146 aa22.19■■□□□ 1.14
GABBR1-220ENST00000494877 FRAT1Q92837 279 aaPredicted RBP22.19■■□□□ 1.14
GABBR1-220ENST00000494877 PRKAR2BP31323 418 aa22.18■■□□□ 1.14
GABBR1-220ENST00000494877 ACEP12821 1306 aa22.18■■□□□ 1.14
GABBR1-220ENST00000494877 TTC21BQ7Z4L5 1316 aa22.17■■□□□ 1.14
GABBR1-220ENST00000494877 PANK1Q8TE04 598 aa22.17■■□□□ 1.14
GABBR1-220ENST00000494877 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
GABBR1-220ENST00000494877 AAMPQ13685 434 aa22.16■■□□□ 1.14
GABBR1-220ENST00000494877 NRKQ7Z2Y5 1582 aa22.16■■□□□ 1.14
GABBR1-220ENST00000494877 PDE4AP27815 886 aa22.15■■□□□ 1.14
GABBR1-220ENST00000494877 COG6Q9Y2V7 657 aa22.15■■□□□ 1.14
GABBR1-220ENST00000494877 USP6P35125 1406 aa22.14■■□□□ 1.14
GABBR1-220ENST00000494877 NUTM2FA1L443 756 aa22.14■■□□□ 1.13
GABBR1-220ENST00000494877 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.13
GABBR1-220ENST00000494877 EXOSC9Q06265 439 aaKnown RBP22.13■■□□□ 1.13
GABBR1-220ENST00000494877 CLUAP1Q96AJ1 413 aa22.13■■□□□ 1.13
GABBR1-220ENST00000494877 BCL2L13Q9BXK5 485 aa22.13■■□□□ 1.13
GABBR1-220ENST00000494877 BACH2Q9BYV9 841 aa22.13■■□□□ 1.13
GABBR1-220ENST00000494877 HMOX1P09601 288 aa22.13■■□□□ 1.13
GABBR1-220ENST00000494877 NFE2L2Q16236 605 aa22.12■■□□□ 1.13
GABBR1-220ENST00000494877 ANKLE2Q86XL3 938 aa22.11■■□□□ 1.13
GABBR1-220ENST00000494877 PHACTR3Q96KR7 559 aa22.11■■□□□ 1.13
GABBR1-220ENST00000494877 OVOS2A0A0J9YW53 1432 aa22.11■■□□□ 1.13
GABBR1-220ENST00000494877 OVOS2Q6IE36 1432 aa22.11■■□□□ 1.13
GABBR1-220ENST00000494877 ANP32AP39687 249 aaKnown RBP22.11■■□□□ 1.13
GABBR1-220ENST00000494877 SKAP1Q86WV1 359 aa22.11■■□□□ 1.13
GABBR1-220ENST00000494877 XRN1Q8IZH2 1706 aaKnown RBP22.11■■□□□ 1.13
GABBR1-220ENST00000494877 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
GABBR1-220ENST00000494877 SSH2Q76I76 1423 aa22.1■■□□□ 1.13
GABBR1-220ENST00000494877 RLBP1P12271 317 aa22.09■■□□□ 1.13
GABBR1-220ENST00000494877 ZKSCAN2Q63HK3 967 aa22.09■■□□□ 1.13
GABBR1-220ENST00000494877 CALD1Q05682 793 aaKnown RBP22.08■■□□□ 1.13
GABBR1-220ENST00000494877 SETD1BQ9UPS6 1966 aaKnown RBP22.08■■□□□ 1.12
GABBR1-220ENST00000494877 TTC21AQ8NDW8 1320 aa22.07■■□□□ 1.12
GABBR1-220ENST00000494877 SMC4Q9NTJ3 1288 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms