RNA–Protein interactions for RNA: ENST00000494398.5

CERKL-213, Transcript of ceramide kinase like, humanhuman

TSL 2

Gene CERKL, Length 2,391 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERKL-213ENST00000494398 ADGRB2O60241 1585 aa27.46■■□□□ 1.99
CERKL-213ENST00000494398 COL3A1P02461 1466 aaPredicted RBP27.45■■□□□ 1.99
CERKL-213ENST00000494398 SPATA31D1Q6ZQQ2 1576 aa27.45■■□□□ 1.99
CERKL-213ENST00000494398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.44■■□□□ 1.98
CERKL-213ENST00000494398 ESF1Q9H501 851 aaKnown RBP27.44■■□□□ 1.98
CERKL-213ENST00000494398 RLBP1P12271 317 aa27.44■■□□□ 1.98
CERKL-213ENST00000494398 PNNQ9H307 717 aaKnown RBP27.43■■□□□ 1.98
CERKL-213ENST00000494398 TSR2Q969E8 191 aaKnown RBP27.43■■□□□ 1.98
CERKL-213ENST00000494398 CT47B1P0C2W7 299 aaPredicted RBP27.42■■□□□ 1.98
CERKL-213ENST00000494398 TRIM35Q9UPQ4 493 aa27.42■■□□□ 1.98
CERKL-213ENST00000494398 DLC1Q96QB1 1528 aa27.42■■□□□ 1.98
CERKL-213ENST00000494398 TNNQ9UQP3 1299 aa27.42■■□□□ 1.98
CERKL-213ENST00000494398 PNPLA6Q8IY17 1366 aa27.41■■□□□ 1.98
CERKL-213ENST00000494398 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.41■■□□□ 1.98
CERKL-213ENST00000494398 PMFBP1Q8TBY8 1022 aa27.41■■□□□ 1.98
CERKL-213ENST00000494398 ANKRD26Q9UPS8 1709 aa27.4■■□□□ 1.98
CERKL-213ENST00000494398 RIPK4P57078 832 aa27.4■■□□□ 1.98
CERKL-213ENST00000494398 RTL5Q5HYW3 569 aaPredicted RBP27.39■■□□□ 1.98
CERKL-213ENST00000494398 PPM1GO15355 546 aaPredicted RBP27.38■■□□□ 1.97
CERKL-213ENST00000494398 EXOSC9Q06265 439 aaKnown RBP27.38■■□□□ 1.97
CERKL-213ENST00000494398 ZKSCAN2Q63HK3 967 aa27.37■■□□□ 1.97
CERKL-213ENST00000494398 PCDHB15Q9Y5E8 787 aa27.36■■□□□ 1.97
CERKL-213ENST00000494398 ZMYM3Q14202 1370 aa27.36■■□□□ 1.97
CERKL-213ENST00000494398 IL16Q14005 1332 aa27.36■■□□□ 1.97
CERKL-213ENST00000494398 ATP7BP35670 1465 aa27.36■■□□□ 1.97
CERKL-213ENST00000494398 WASLO00401 505 aaPredicted RBP27.35■■□□□ 1.97
CERKL-213ENST00000494398 FCHSD2O94868 740 aa27.35■■□□□ 1.97
CERKL-213ENST00000494398 FTSJ3Q8IY81 847 aaKnown RBP27.35■■□□□ 1.97
CERKL-213ENST00000494398 SMC4Q9NTJ3 1288 aa27.35■■□□□ 1.97
CERKL-213ENST00000494398 POLKQ9UBT6 870 aa27.35■■□□□ 1.97
CERKL-213ENST00000494398 FBLN1P23142 703 aa27.34■■□□□ 1.97
CERKL-213ENST00000494398 HDGFP51858 240 aaKnown RBP27.34■■□□□ 1.97
CERKL-213ENST00000494398 LAS1LQ9Y4W2 734 aaKnown RBP27.34■■□□□ 1.97
CERKL-213ENST00000494398 TXNDC2Q86VQ3 553 aa27.34■■□□□ 1.97
CERKL-213ENST00000494398 MVPQ14764 893 aaKnown RBP27.33■■□□□ 1.97
CERKL-213ENST00000494398 DZIP1LQ8IYY4 767 aaKnown RBP27.33■■□□□ 1.97
CERKL-213ENST00000494398 METP08581 1390 aa27.33■■□□□ 1.97
CERKL-213ENST00000494398 DEKP35659 375 aaKnown RBP27.32■■□□□ 1.96
CERKL-213ENST00000494398 DAXXQ9UER7 740 aaPredicted RBP27.32■■□□□ 1.96
CERKL-213ENST00000494398 NEFMP07197 916 aa27.31■■□□□ 1.96
CERKL-213ENST00000494398 RWDD1Q9H446 243 aaPredicted RBP27.31■■□□□ 1.96
CERKL-213ENST00000494398 KIF20BQ96Q89 1820 aa27.3■■□□□ 1.96
CERKL-213ENST00000494398 SETD1AO15047 1707 aaKnown RBP27.3■■□□□ 1.96
CERKL-213ENST00000494398 SSH1Q8WYL5 1049 aa27.29■■□□□ 1.96
CERKL-213ENST00000494398 PRKAR2BP31323 418 aa27.29■■□□□ 1.96
CERKL-213ENST00000494398 PPIP5K1Q6PFW1 1433 aa27.29■■□□□ 1.96
CERKL-213ENST00000494398 NUDT16Q96DE0 195 aaKnown RBP27.27■■□□□ 1.96
CERKL-213ENST00000494398 RSPH6AQ9H0K4 717 aa27.27■■□□□ 1.96
CERKL-213ENST00000494398 CPSF1Q10570 1443 aaKnown RBP27.26■■□□□ 1.96
CERKL-213ENST00000494398 EDC4Q6P2E9 1401 aaKnown RBP27.26■■□□□ 1.95
CERKL-213ENST00000494398 TRIM27P14373 513 aa27.26■■□□□ 1.95
CERKL-213ENST00000494398 NME9Q86XW9 330 aa27.26■■□□□ 1.95
CERKL-213ENST00000494398 CCDC61Q9Y6R9 512 aa27.25■■□□□ 1.95
CERKL-213ENST00000494398 SLC4A3P48751 1232 aa27.24■■□□□ 1.95
CERKL-213ENST00000494398 SIRT1Q96EB6 747 aa27.24■■□□□ 1.95
CERKL-213ENST00000494398 NRXN3Q9Y4C0 1643 aa27.24■■□□□ 1.95
CERKL-213ENST00000494398 ATF7IPQ6VMQ6 1270 aa27.24■■□□□ 1.95
CERKL-213ENST00000494398 EMILIN1Q9Y6C2 1016 aa27.24■■□□□ 1.95
CERKL-213ENST00000494398 NOB1Q9ULX3 412 aaKnown RBP27.23■■□□□ 1.95
CERKL-213ENST00000494398 HMOX1P09601 288 aa27.23■■□□□ 1.95
CERKL-213ENST00000494398 PDZRN3Q9UPQ7 1066 aa27.23■■□□□ 1.95
CERKL-213ENST00000494398 TNRQ92752 1358 aa27.22■■□□□ 1.95
CERKL-213ENST00000494398 FAM135BQ49AJ0 1406 aa27.22■■□□□ 1.95
CERKL-213ENST00000494398 CDC42BPGQ6DT37 1551 aa27.21■■□□□ 1.95
CERKL-213ENST00000494398 NCKAP5LQ9HCH0 1330 aa27.21■■□□□ 1.95
CERKL-213ENST00000494398 ITPRIPQ8IWB1 547 aa27.21■■□□□ 1.95
CERKL-213ENST00000494398 COG3Q96JB2 828 aa27.21■■□□□ 1.95
CERKL-213ENST00000494398 USP35Q9P2H5 1018 aa27.21■■□□□ 1.95
CERKL-213ENST00000494398 ZRANB1Q9UGI0 708 aa27.21■■□□□ 1.95
CERKL-213ENST00000494398 DDX19BQ9UMR2 479 aa27.21■■□□□ 1.95
CERKL-213ENST00000494398 LRRC7Q96NW7 1537 aa27.2■■□□□ 1.95
CERKL-213ENST00000494398 PHACTR3Q96KR7 559 aa27.2■■□□□ 1.94
CERKL-213ENST00000494398 IPO8O15397 1037 aaKnown RBP27.19■■□□□ 1.94
CERKL-213ENST00000494398 NFE2L2Q16236 605 aa27.19■■□□□ 1.94
CERKL-213ENST00000494398 IL13P35225 146 aa27.18■■□□□ 1.94
CERKL-213ENST00000494398 KIF16BQ96L93 1317 aa27.18■■□□□ 1.94
CERKL-213ENST00000494398 TECPR2O15040 1411 aa27.17■■□□□ 1.94
CERKL-213ENST00000494398 TMEM2Q9UHN6 1383 aa27.17■■□□□ 1.94
CERKL-213ENST00000494398 AATKQ6ZMQ8 1374 aa27.16■■□□□ 1.94
CERKL-213ENST00000494398 ALDH1L2Q3SY69 923 aa27.16■■□□□ 1.94
CERKL-213ENST00000494398 ZNF692Q9BU19 519 aaPredicted RBP27.16■■□□□ 1.94
CERKL-213ENST00000494398 CALD1Q05682 793 aaKnown RBP27.15■■□□□ 1.94
CERKL-213ENST00000494398 MAP2P11137 1827 aaKnown RBP27.15■■□□□ 1.94
CERKL-213ENST00000494398 SEC24BO95487 1268 aa27.15■■□□□ 1.94
CERKL-213ENST00000494398 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.93
CERKL-213ENST00000494398 TMEM57Q8N5G2 664 aa27.14■■□□□ 1.93
CERKL-213ENST00000494398 KIF13AQ9H1H9 1805 aa27.13■■□□□ 1.93
CERKL-213ENST00000494398 USP19O94966 1318 aa27.13■■□□□ 1.93
CERKL-213ENST00000494398 ZNF428Q96B54 188 aa27.13■■□□□ 1.93
CERKL-213ENST00000494398 CDK12Q9NYV4 1490 aaPredicted RBP27.12■■□□□ 1.93
CERKL-213ENST00000494398 HDAC1Q13547 482 aaPredicted RBP27.12■■□□□ 1.93
CERKL-213ENST00000494398 THUMPD2Q9BTF0 503 aaKnown RBP27.12■■□□□ 1.93
CERKL-213ENST00000494398 CPS1P31327 1500 aa27.1■■□□□ 1.93
CERKL-213ENST00000494398 PRR36Q9H6K5 1346 aa27.1■■□□□ 1.93
CERKL-213ENST00000494398 ROBO2Q9HCK4 1378 aa27.1■■□□□ 1.93
CERKL-213ENST00000494398 KNDC1Q76NI1 1749 aa27.09■■□□□ 1.93
CERKL-213ENST00000494398 GNAI1P63096 354 aa27.09■■□□□ 1.93
CERKL-213ENST00000494398 ZBTB40Q9NUA8 1239 aa27.08■■□□□ 1.93
CERKL-213ENST00000494398 UPF2Q9HAU5 1272 aaKnown RBP27.08■■□□□ 1.93
CERKL-213ENST00000494398 IFT57Q9NWB7 429 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms