RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 LRRC59Q96AG4 307 aaKnown RBP7.61□□□□□ -1.19
SRPRB-205ENST00000494297 AHDC1Q5TGY3 1603 aaPredicted RBP7.6□□□□□ -1.19
SRPRB-205ENST00000494297 NPHP3Q7Z494 1330 aa7.6□□□□□ -1.19
SRPRB-205ENST00000494297 EVC2Q86UK5 1308 aa7.6□□□□□ -1.19
SRPRB-205ENST00000494297 PRR36Q9H6K5 1346 aa7.6□□□□□ -1.19
SRPRB-205ENST00000494297 FOXO3O43524 673 aa7.6□□□□□ -1.19
SRPRB-205ENST00000494297 NUDT16Q96DE0 195 aaKnown RBP7.6□□□□□ -1.19
SRPRB-205ENST00000494297 DCBLD2Q96PD2 775 aa7.6□□□□□ -1.19
SRPRB-205ENST00000494297 PUS7Q96PZ0 661 aaKnown RBP7.6□□□□□ -1.19
SRPRB-205ENST00000494297 PHF8Q9UPP1 1060 aa7.6□□□□□ -1.19
SRPRB-205ENST00000494297 CCDC61Q9Y6R9 512 aa7.6□□□□□ -1.19
SRPRB-205ENST00000494297 TULP4Q9NRJ4 1543 aa7.59□□□□□ -1.19
SRPRB-205ENST00000494297 FMN2Q9NZ56 1722 aa7.59□□□□□ -1.19
SRPRB-205ENST00000494297 ST20-MTHFSA0A0A6YYL1 179 aa7.59□□□□□ -1.19
SRPRB-205ENST00000494297 PLEKHG3A1L390 1219 aa7.59□□□□□ -1.19
SRPRB-205ENST00000494297 DDX17Q92841 729 aaKnown RBP7.59□□□□□ -1.19
SRPRB-205ENST00000494297 TESK2Q96S53 571 aa7.59□□□□□ -1.19
SRPRB-205ENST00000494297 JCADQ9P266 1359 aa7.59□□□□□ -1.2
SRPRB-205ENST00000494297 POTEB2H3BUK9 544 aa7.58□□□□□ -1.2
SRPRB-205ENST00000494297 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
SRPRB-205ENST00000494297 PSME1Q06323 249 aa7.58□□□□□ -1.2
SRPRB-205ENST00000494297 KRT28Q7Z3Y7 464 aa7.58□□□□□ -1.2
SRPRB-205ENST00000494297 PMFBP1Q8TBY8 1022 aa7.58□□□□□ -1.2
SRPRB-205ENST00000494297 CABP2Q9NPB3 220 aa7.58□□□□□ -1.2
SRPRB-205ENST00000494297 COL16A1Q07092 1604 aaPredicted RBP7.57□□□□□ -1.2
SRPRB-205ENST00000494297 NHSL1Q5SYE7 1610 aa7.57□□□□□ -1.2
SRPRB-205ENST00000494297 POLR3AO14802 1390 aaPredicted RBP7.57□□□□□ -1.2
SRPRB-205ENST00000494297 USP47Q96K76 1375 aa7.57□□□□□ -1.2
SRPRB-205ENST00000494297 USP32Q8NFA0 1604 aa7.56□□□□□ -1.2
SRPRB-205ENST00000494297 ATP7BP35670 1465 aa7.56□□□□□ -1.2
SRPRB-205ENST00000494297 PXDNQ92626 1479 aa7.56□□□□□ -1.2
SRPRB-205ENST00000494297 SPATA31A6Q5VVP1 1343 aa7.56□□□□□ -1.2
SRPRB-205ENST00000494297 PHLPP1O60346 1717 aa7.56□□□□□ -1.2
SRPRB-205ENST00000494297 PAK3O75914 559 aaPredicted RBP7.56□□□□□ -1.2
SRPRB-205ENST00000494297 NGDNQ8NEJ9 315 aaKnown RBP7.56□□□□□ -1.2
SRPRB-205ENST00000494297 CABP1Q9NZU7 370 aa7.56□□□□□ -1.2
SRPRB-205ENST00000494297 SBNO1A3KN83 1393 aa7.56□□□□□ -1.2
SRPRB-205ENST00000494297 ACEP12821 1306 aa7.55□□□□□ -1.2
SRPRB-205ENST00000494297 SPATA31A3Q5VYP0 1347 aa7.55□□□□□ -1.2
SRPRB-205ENST00000494297 KIF1AQ12756 1690 aa7.55□□□□□ -1.2
SRPRB-205ENST00000494297 QRICH2Q9H0J4 1663 aa7.55□□□□□ -1.2
SRPRB-205ENST00000494297 EIF4G2P78344 907 aaKnown RBP eCLIP7.55□□□□□ -1.2
SRPRB-205ENST00000494297 TMF1P82094 1093 aa7.55□□□□□ -1.2
SRPRB-205ENST00000494297 ATAD2Q6PL18 1390 aa7.55□□□□□ -1.2
SRPRB-205ENST00000494297 PNPLA6Q8IY17 1366 aa7.55□□□□□ -1.2
SRPRB-205ENST00000494297 PPIP5K1Q6PFW1 1433 aa7.54□□□□□ -1.2
SRPRB-205ENST00000494297 XPCQ01831 940 aaPredicted RBP7.54□□□□□ -1.2
SRPRB-205ENST00000494297 CDCA8Q53HL2 280 aa7.54□□□□□ -1.2
SRPRB-205ENST00000494297 BRD4O60885 1362 aaPredicted RBP7.54□□□□□ -1.2
SRPRB-205ENST00000494297 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
SRPRB-205ENST00000494297 RGPD8O14715 1765 aaPredicted RBP7.53□□□□□ -1.2
SRPRB-205ENST00000494297 CPSF1Q10570 1443 aaKnown RBP7.52□□□□□ -1.2
SRPRB-205ENST00000494297 SHPRHQ149N8 1683 aa7.52□□□□□ -1.21
SRPRB-205ENST00000494297 ARHGEF10O15013 1369 aa7.52□□□□□ -1.21
SRPRB-205ENST00000494297 NINLQ9Y2I6 1382 aa7.52□□□□□ -1.21
SRPRB-205ENST00000494297 SLC12A5Q9H2X9 1139 aa7.52□□□□□ -1.21
SRPRB-205ENST00000494297 TNS3Q68CZ2 1445 aa7.52□□□□□ -1.21
SRPRB-205ENST00000494297 TOPAZ1Q8N9V7 1692 aa7.51□□□□□ -1.21
SRPRB-205ENST00000494297 DISP3Q9P2K9 1392 aa7.51□□□□□ -1.21
SRPRB-205ENST00000494297 ITSN1Q15811 1721 aa7.51□□□□□ -1.21
SRPRB-205ENST00000494297 SSH2Q76I76 1423 aa7.51□□□□□ -1.21
SRPRB-205ENST00000494297 COL22A1Q8NFW1 1626 aaPredicted RBP7.5□□□□□ -1.21
SRPRB-205ENST00000494297 NUTM2BA6NNL0 878 aaPredicted RBP7.5□□□□□ -1.21
SRPRB-205ENST00000494297 NUTM2EB1AL46 878 aaPredicted RBP7.5□□□□□ -1.21
SRPRB-205ENST00000494297 HDGFL2Q7Z4V5 671 aaPredicted RBP7.5□□□□□ -1.21
SRPRB-205ENST00000494297 NUTM2AQ8IVF1 878 aaPredicted RBP7.5□□□□□ -1.21
SRPRB-205ENST00000494297 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
SRPRB-205ENST00000494297 ZNF579Q8NAF0 562 aaKnown RBP7.5□□□□□ -1.21
SRPRB-205ENST00000494297 TMC1Q8TDI8 760 aa7.5□□□□□ -1.21
SRPRB-205ENST00000494297 TERF2IPQ9NYB0 399 aa7.5□□□□□ -1.21
SRPRB-205ENST00000494297 USP6P35125 1406 aa7.5□□□□□ -1.21
SRPRB-205ENST00000494297 CD163L1Q9NR16 1453 aa7.49□□□□□ -1.21
SRPRB-205ENST00000494297 LRP6O75581 1613 aa7.49□□□□□ -1.21
SRPRB-205ENST00000494297 LMOD2Q6P5Q4 547 aa7.49□□□□□ -1.21
SRPRB-205ENST00000494297 NLRP13Q86W25 1043 aa7.49□□□□□ -1.21
SRPRB-205ENST00000494297 PHF12Q96QT6 1004 aa7.49□□□□□ -1.21
SRPRB-205ENST00000494297 RGS17Q9UGC6 210 aaPredicted RBP7.49□□□□□ -1.21
SRPRB-205ENST00000494297 MED1Q15648 1581 aaPredicted RBP7.49□□□□□ -1.21
SRPRB-205ENST00000494297 TRPM3Q9HCF6 1732 aaPredicted RBP7.49□□□□□ -1.21
SRPRB-205ENST00000494297 TTC21BQ7Z4L5 1316 aa7.49□□□□□ -1.21
SRPRB-205ENST00000494297 TTC21AQ8NDW8 1320 aa7.49□□□□□ -1.21
SRPRB-205ENST00000494297 KTN1Q86UP2 1357 aaKnown RBP7.48□□□□□ -1.21
SRPRB-205ENST00000494297 C11orf95C9JLR9 678 aaPredicted RBP7.48□□□□□ -1.21
SRPRB-205ENST00000494297 GALR2O43603 387 aaPredicted RBP7.48□□□□□ -1.21
SRPRB-205ENST00000494297 ZEB1P37275 1124 aaPredicted RBP7.48□□□□□ -1.21
SRPRB-205ENST00000494297 MEX3CQ5U5Q3 659 aaKnown RBP7.48□□□□□ -1.21
SRPRB-205ENST00000494297 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
SRPRB-205ENST00000494297 CABLES1Q8TDN4 633 aa7.48□□□□□ -1.21
SRPRB-205ENST00000494297 ANKRD36BQ8N2N9 1353 aa7.47□□□□□ -1.21
SRPRB-205ENST00000494297 ADAMTS2O95450 1211 aa7.47□□□□□ -1.21
SRPRB-205ENST00000494297 ZNF772Q68DY9 489 aaPredicted RBP7.47□□□□□ -1.21
SRPRB-205ENST00000494297 ALS2Q96Q42 1657 aa7.47□□□□□ -1.21
SRPRB-205ENST00000494297 USP19O94966 1318 aa7.47□□□□□ -1.21
SRPRB-205ENST00000494297 A0A1W2PP64 1363 aa7.46□□□□□ -1.21
SRPRB-205ENST00000494297 USP31Q70CQ4 1352 aa7.46□□□□□ -1.21
SRPRB-205ENST00000494297 EDC4Q6P2E9 1401 aaKnown RBP7.46□□□□□ -1.21
SRPRB-205ENST00000494297 FAM83GA6ND36 823 aa7.46□□□□□ -1.22
SRPRB-205ENST00000494297 GCP02774 474 aa7.46□□□□□ -1.22
SRPRB-205ENST00000494297 HAP1P54257 671 aaPredicted RBP7.46□□□□□ -1.22
SRPRB-205ENST00000494297 NLRP6P59044 892 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms