RNA–Protein interactions for RNA: ENST00000494062.2

SPART-209, Transcript of spartin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPART, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-209ENST00000494062 NINLQ9Y2I6 1382 aa23.8■■□□□ 1.4
SPART-209ENST00000494062 RLBP1P12271 317 aa23.8■■□□□ 1.4
SPART-209ENST00000494062 POLKQ9UBT6 870 aa23.8■■□□□ 1.4
SPART-209ENST00000494062 SPATA31D1Q6ZQQ2 1576 aa23.8■■□□□ 1.4
SPART-209ENST00000494062 NGEFQ8N5V2 710 aa23.79■■□□□ 1.4
SPART-209ENST00000494062 NOP58Q9Y2X3 529 aaKnown RBP23.79■■□□□ 1.4
SPART-209ENST00000494062 IGHDP01880 384 aa23.79■■□□□ 1.4
SPART-209ENST00000494062 EXOSC9Q06265 439 aaKnown RBP23.79■■□□□ 1.4
SPART-209ENST00000494062 CENPQQ7L2Z9 268 aaPredicted RBP23.79■■□□□ 1.4
SPART-209ENST00000494062 THUMPD2Q9BTF0 503 aaKnown RBP23.79■■□□□ 1.4
SPART-209ENST00000494062 KIF13AQ9H1H9 1805 aa23.79■■□□□ 1.4
SPART-209ENST00000494062 PRKAR2BP31323 418 aa23.78■■□□□ 1.4
SPART-209ENST00000494062 WDR63Q8IWG1 891 aa23.78■■□□□ 1.4
SPART-209ENST00000494062 KDM2BQ8NHM5 1336 aa23.78■■□□□ 1.4
SPART-209ENST00000494062 PPIP5K1Q6PFW1 1433 aa23.78■■□□□ 1.4
SPART-209ENST00000494062 NBR1Q14596 966 aa23.78■■□□□ 1.4
SPART-209ENST00000494062 BACH2Q9BYV9 841 aa23.78■■□□□ 1.4
SPART-209ENST00000494062 MYH16Q9H6N6 1097 aa23.78■■□□□ 1.4
SPART-209ENST00000494062 PLEKHF1Q96S99 279 aa23.77■■□□□ 1.4
SPART-209ENST00000494062 HDGFP51858 240 aaKnown RBP23.77■■□□□ 1.4
SPART-209ENST00000494062 TRIM35Q9UPQ4 493 aa23.76■■□□□ 1.39
SPART-209ENST00000494062 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
SPART-209ENST00000494062 PHF23Q9BUL5 403 aaPredicted RBP23.75■■□□□ 1.39
SPART-209ENST00000494062 IPO9Q96P70 1041 aaKnown RBP23.74■■□□□ 1.39
SPART-209ENST00000494062 CCDC61Q9Y6R9 512 aa23.74■■□□□ 1.39
SPART-209ENST00000494062 PHACTR3Q96KR7 559 aa23.73■■□□□ 1.39
SPART-209ENST00000494062 SMC4Q9NTJ3 1288 aa23.73■■□□□ 1.39
SPART-209ENST00000494062 NLRP1Q9C000 1473 aa23.73■■□□□ 1.39
SPART-209ENST00000494062 ZBTB47Q9UFB7 747 aaPredicted RBP23.73■■□□□ 1.39
SPART-209ENST00000494062 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
SPART-209ENST00000494062 REREQ9P2R6 1566 aa23.73■■□□□ 1.39
SPART-209ENST00000494062 ROBO2Q9HCK4 1378 aa23.72■■□□□ 1.39
SPART-209ENST00000494062 TMEM2Q9UHN6 1383 aa23.72■■□□□ 1.39
SPART-209ENST00000494062 PRR36Q9H6K5 1346 aa23.72■■□□□ 1.39
SPART-209ENST00000494062 PMFBP1Q8TBY8 1022 aa23.72■■□□□ 1.39
SPART-209ENST00000494062 COG3Q96JB2 828 aa23.72■■□□□ 1.39
SPART-209ENST00000494062 ELL2O00472 640 aaPredicted RBP23.71■■□□□ 1.39
SPART-209ENST00000494062 NEFMP07197 916 aa23.71■■□□□ 1.39
SPART-209ENST00000494062 CCDC27Q2M243 656 aa23.7■■□□□ 1.38
SPART-209ENST00000494062 FTSJ3Q8IY81 847 aaKnown RBP23.7■■□□□ 1.38
SPART-209ENST00000494062 PDE3AQ14432 1141 aa23.7■■□□□ 1.38
SPART-209ENST00000494062 MS4A1P11836 297 aa23.69■■□□□ 1.38
SPART-209ENST00000494062 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
SPART-209ENST00000494062 SSH1Q8WYL5 1049 aa23.67■■□□□ 1.38
SPART-209ENST00000494062 RBM33Q96EV2 1170 aaKnown RBP23.67■■□□□ 1.38
SPART-209ENST00000494062 PCDHB15Q9Y5E8 787 aa23.66■■□□□ 1.38
SPART-209ENST00000494062 COL3A1P02461 1466 aaPredicted RBP23.65■■□□□ 1.38
SPART-209ENST00000494062 RSPH6AQ9H0K4 717 aa23.65■■□□□ 1.38
SPART-209ENST00000494062 MYT1Q01538 1121 aa23.65■■□□□ 1.38
SPART-209ENST00000494062 SLC4A3P48751 1232 aa23.64■■□□□ 1.38
SPART-209ENST00000494062 DCTN1Q14203 1278 aa23.64■■□□□ 1.38
SPART-209ENST00000494062 AMOTL2Q9Y2J4 779 aa23.64■■□□□ 1.38
SPART-209ENST00000494062 NRXN3Q9Y4C0 1643 aa23.64■■□□□ 1.37
SPART-209ENST00000494062 PLEKHG5O94827 1062 aa23.64■■□□□ 1.37
SPART-209ENST00000494062 ACEP12821 1306 aa23.63■■□□□ 1.37
SPART-209ENST00000494062 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
SPART-209ENST00000494062 ITPRIPQ8IWB1 547 aa23.63■■□□□ 1.37
SPART-209ENST00000494062 FCHSD2O94868 740 aa23.62■■□□□ 1.37
SPART-209ENST00000494062 ZKSCAN2Q63HK3 967 aa23.62■■□□□ 1.37
SPART-209ENST00000494062 NOB1Q9ULX3 412 aaKnown RBP23.62■■□□□ 1.37
SPART-209ENST00000494062 NUTM2GQ5VZR2 741 aa23.61■■□□□ 1.37
SPART-209ENST00000494062 BCL11AQ9H165 835 aa23.61■■□□□ 1.37
SPART-209ENST00000494062 AEBP1Q8IUX7 1158 aa23.61■■□□□ 1.37
SPART-209ENST00000494062 CPS1P31327 1500 aa23.61■■□□□ 1.37
SPART-209ENST00000494062 DZIP1LQ8IYY4 767 aaKnown RBP23.6■■□□□ 1.37
SPART-209ENST00000494062 DLC1Q96QB1 1528 aa23.6■■□□□ 1.37
SPART-209ENST00000494062 ATP7BP35670 1465 aa23.59■■□□□ 1.37
SPART-209ENST00000494062 EDC4Q6P2E9 1401 aaKnown RBP23.59■■□□□ 1.37
SPART-209ENST00000494062 PNPLA6Q8IY17 1366 aa23.59■■□□□ 1.37
SPART-209ENST00000494062 TRIM27P14373 513 aa23.59■■□□□ 1.37
SPART-209ENST00000494062 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
SPART-209ENST00000494062 IL13P35225 146 aa23.59■■□□□ 1.37
SPART-209ENST00000494062 PNNQ9H307 717 aaKnown RBP23.58■■□□□ 1.37
SPART-209ENST00000494062 CPSF1Q10570 1443 aaKnown RBP23.58■■□□□ 1.37
SPART-209ENST00000494062 SETD1AO15047 1707 aaKnown RBP23.58■■□□□ 1.37
SPART-209ENST00000494062 FAM161AQ3B820 660 aa23.57■■□□□ 1.36
SPART-209ENST00000494062 C8orf34Q49A92 452 aa23.57■■□□□ 1.36
SPART-209ENST00000494062 NGDNQ8NEJ9 315 aaKnown RBP23.56■■□□□ 1.36
SPART-209ENST00000494062 MED14O60244 1454 aa23.56■■□□□ 1.36
SPART-209ENST00000494062 NFE2L2Q16236 605 aa23.56■■□□□ 1.36
SPART-209ENST00000494062 TSPYL6Q8N831 410 aa23.56■■□□□ 1.36
SPART-209ENST00000494062 MVPQ14764 893 aaKnown RBP23.55■■□□□ 1.36
SPART-209ENST00000494062 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
SPART-209ENST00000494062 SULT6B1Q6IMI4 303 aa23.55■■□□□ 1.36
SPART-209ENST00000494062 TTC21BQ7Z4L5 1316 aa23.55■■□□□ 1.36
SPART-209ENST00000494062 LRRC7Q96NW7 1537 aa23.55■■□□□ 1.36
SPART-209ENST00000494062 C14orf37Q86TY3 774 aa23.54■■□□□ 1.36
SPART-209ENST00000494062 ZNF692Q9BU19 519 aaPredicted RBP23.53■■□□□ 1.36
SPART-209ENST00000494062 PTPRUQ92729 1446 aa23.53■■□□□ 1.36
SPART-209ENST00000494062 TMEM57Q8N5G2 664 aa23.53■■□□□ 1.36
SPART-209ENST00000494062 KIF20BQ96Q89 1820 aa23.52■■□□□ 1.36
SPART-209ENST00000494062 ADGRB2O60241 1585 aa23.52■■□□□ 1.36
SPART-209ENST00000494062 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
SPART-209ENST00000494062 FAM135BQ49AJ0 1406 aa23.52■■□□□ 1.36
SPART-209ENST00000494062 ATF7IPQ6VMQ6 1270 aa23.51■■□□□ 1.35
SPART-209ENST00000494062 PDZRN3Q9UPQ7 1066 aa23.51■■□□□ 1.35
SPART-209ENST00000494062 EIF4A2Q14240 407 aaKnown RBP23.5■■□□□ 1.35
SPART-209ENST00000494062 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
SPART-209ENST00000494062 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
SPART-209ENST00000494062 THEMISQ8N1K5 641 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms