RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
CLCN6-208ENST00000494028 OVOS2A0A0J9YW53 1432 aa14.11□□□□□ -0.15
CLCN6-208ENST00000494028 OVOS2Q6IE36 1432 aa14.11□□□□□ -0.15
CLCN6-208ENST00000494028 THEMISQ8N1K5 641 aaPredicted RBP14.11□□□□□ -0.15
CLCN6-208ENST00000494028 CFAP53Q96M91 514 aa14.11□□□□□ -0.15
CLCN6-208ENST00000494028 PPP4R2Q9NY27 417 aa14.11□□□□□ -0.15
CLCN6-208ENST00000494028 RCAN3Q9UKA8 241 aa14.11□□□□□ -0.15
CLCN6-208ENST00000494028 TBX22Q9Y458 520 aa14.11□□□□□ -0.15
CLCN6-208ENST00000494028 PNPLA6Q8IY17 1366 aa14.1□□□□□ -0.15
CLCN6-208ENST00000494028 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
CLCN6-208ENST00000494028 NUDT16Q96DE0 195 aaKnown RBP14.1□□□□□ -0.15
CLCN6-208ENST00000494028 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
CLCN6-208ENST00000494028 USP6P35125 1406 aa14.09□□□□□ -0.15
CLCN6-208ENST00000494028 ANKARQ7Z5J8 1434 aa14.09□□□□□ -0.15
CLCN6-208ENST00000494028 RGPD1P0DJD0 1748 aa14.08□□□□□ -0.16
CLCN6-208ENST00000494028 APAF1O14727 1248 aa14.08□□□□□ -0.16
CLCN6-208ENST00000494028 DUSP27Q5VZP5 1158 aa14.08□□□□□ -0.16
CLCN6-208ENST00000494028 NGEFQ8N5V2 710 aa14.08□□□□□ -0.16
CLCN6-208ENST00000494028 NCKAP5LQ9HCH0 1330 aa14.07□□□□□ -0.16
CLCN6-208ENST00000494028 AATKQ6ZMQ8 1374 aa14.07□□□□□ -0.16
CLCN6-208ENST00000494028 SSH2Q76I76 1423 aa14.07□□□□□ -0.16
CLCN6-208ENST00000494028 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
CLCN6-208ENST00000494028 RUNDC1Q96C34 613 aa14.06□□□□□ -0.16
CLCN6-208ENST00000494028 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
CLCN6-208ENST00000494028 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
CLCN6-208ENST00000494028 PHF23Q9BUL5 403 aaPredicted RBP14.05□□□□□ -0.16
CLCN6-208ENST00000494028 AMOTL2Q9Y2J4 779 aa14.05□□□□□ -0.16
CLCN6-208ENST00000494028 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
CLCN6-208ENST00000494028 NME9Q86XW9 330 aa14.04□□□□□ -0.16
CLCN6-208ENST00000494028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLCN6-208ENST00000494028 TRMT2AQ8IZ69 625 aaKnown RBP14.04□□□□□ -0.16
CLCN6-208ENST00000494028 NPHP4O75161 1426 aaPredicted RBP14.04□□□□□ -0.16
CLCN6-208ENST00000494028 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
CLCN6-208ENST00000494028 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
CLCN6-208ENST00000494028 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.16
CLCN6-208ENST00000494028 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
CLCN6-208ENST00000494028 PLEKHG3A1L390 1219 aa14.01□□□□□ -0.17
CLCN6-208ENST00000494028 E9PSI1 815 aa14.01□□□□□ -0.17
CLCN6-208ENST00000494028 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
CLCN6-208ENST00000494028 B4GALNT3Q6L9W6 998 aa14.01□□□□□ -0.17
CLCN6-208ENST00000494028 ACEP12821 1306 aa14□□□□□ -0.17
CLCN6-208ENST00000494028 U2AF1L5P0DN76 240 aaPredicted RBP14□□□□□ -0.17
CLCN6-208ENST00000494028 KCNA6P17658 529 aa14□□□□□ -0.17
CLCN6-208ENST00000494028 U2AF1Q01081 240 aaKnown RBP eCLIP14□□□□□ -0.17
CLCN6-208ENST00000494028 CCDC27Q2M243 656 aa14□□□□□ -0.17
CLCN6-208ENST00000494028 WWC1Q8IX03 1113 aa14□□□□□ -0.17
CLCN6-208ENST00000494028 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
CLCN6-208ENST00000494028 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
CLCN6-208ENST00000494028 STRCQ7RTU9 1775 aa13.99□□□□□ -0.17
CLCN6-208ENST00000494028 USP31Q70CQ4 1352 aa13.99□□□□□ -0.17
CLCN6-208ENST00000494028 TTC21BQ7Z4L5 1316 aa13.99□□□□□ -0.17
CLCN6-208ENST00000494028 HSPA2P54652 639 aa13.99□□□□□ -0.17
CLCN6-208ENST00000494028 POLKQ9UBT6 870 aa13.99□□□□□ -0.17
CLCN6-208ENST00000494028 RRP7AQ9Y3A4 280 aaKnown RBP13.99□□□□□ -0.17
CLCN6-208ENST00000494028 PLEKHF1Q96S99 279 aa13.98□□□□□ -0.17
CLCN6-208ENST00000494028 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
CLCN6-208ENST00000494028 KIF1AQ12756 1690 aa13.98□□□□□ -0.17
CLCN6-208ENST00000494028 LTN1O94822 1766 aa13.97□□□□□ -0.17
CLCN6-208ENST00000494028 U2SURPO15042 1029 aaKnown RBP13.97□□□□□ -0.17
CLCN6-208ENST00000494028 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
CLCN6-208ENST00000494028 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
CLCN6-208ENST00000494028 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
CLCN6-208ENST00000494028 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
CLCN6-208ENST00000494028 EXOC6Q8TAG9 804 aa13.96□□□□□ -0.17
CLCN6-208ENST00000494028 COG3Q96JB2 828 aa13.96□□□□□ -0.17
CLCN6-208ENST00000494028 TRPM3Q9HCF6 1732 aaPredicted RBP13.95□□□□□ -0.18
CLCN6-208ENST00000494028 TTC21AQ8NDW8 1320 aa13.95□□□□□ -0.18
CLCN6-208ENST00000494028 PHRF1Q9P1Y6 1649 aaKnown RBP13.95□□□□□ -0.18
CLCN6-208ENST00000494028 NUTM2FA1L443 756 aa13.95□□□□□ -0.18
CLCN6-208ENST00000494028 MAPK8IP3Q9UPT6 1336 aa13.94□□□□□ -0.18
CLCN6-208ENST00000494028 PLIN1O60240 522 aa13.94□□□□□ -0.18
CLCN6-208ENST00000494028 FBLN1P23142 703 aa13.94□□□□□ -0.18
CLCN6-208ENST00000494028 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
CLCN6-208ENST00000494028 RSPH6AQ9H0K4 717 aa13.94□□□□□ -0.18
CLCN6-208ENST00000494028 CRBNQ96SW2 442 aa13.93□□□□□ -0.18
CLCN6-208ENST00000494028 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
CLCN6-208ENST00000494028 NFAT5O94916 1531 aa13.92□□□□□ -0.18
CLCN6-208ENST00000494028 IL13P35225 146 aa13.92□□□□□ -0.18
CLCN6-208ENST00000494028 TMPOP42166 694 aaKnown RBP13.92□□□□□ -0.18
CLCN6-208ENST00000494028 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
CLCN6-208ENST00000494028 RRS1Q15050 365 aaKnown RBP13.91□□□□□ -0.18
CLCN6-208ENST00000494028 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
CLCN6-208ENST00000494028 C20orf194Q5TEA3 1177 aa13.91□□□□□ -0.18
CLCN6-208ENST00000494028 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
CLCN6-208ENST00000494028 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
CLCN6-208ENST00000494028 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
CLCN6-208ENST00000494028 IL16Q14005 1332 aa13.9□□□□□ -0.19
CLCN6-208ENST00000494028 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.19
CLCN6-208ENST00000494028 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-208ENST00000494028 PMFBP1Q8TBY8 1022 aa13.89□□□□□ -0.19
CLCN6-208ENST00000494028 SLIT3O75094 1523 aa13.89□□□□□ -0.19
CLCN6-208ENST00000494028 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
CLCN6-208ENST00000494028 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
CLCN6-208ENST00000494028 ARHGEF10O15013 1369 aa13.88□□□□□ -0.19
CLCN6-208ENST00000494028 FCHSD2O94868 740 aa13.88□□□□□ -0.19
CLCN6-208ENST00000494028 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.88□□□□□ -0.19
CLCN6-208ENST00000494028 MYH16Q9H6N6 1097 aa13.88□□□□□ -0.19
CLCN6-208ENST00000494028 CAMTA1Q9Y6Y1 1673 aa13.88□□□□□ -0.19
CLCN6-208ENST00000494028 FLT4P35916 1363 aa13.87□□□□□ -0.19
CLCN6-208ENST00000494028 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms