RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 C20orf194Q5TEA3 1177 aa17.94■□□□□ 0.46
VCP-207ENST00000493886 CPS1P31327 1500 aa17.93■□□□□ 0.46
VCP-207ENST00000493886 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.93■□□□□ 0.46
VCP-207ENST00000493886 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
VCP-207ENST00000493886 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
VCP-207ENST00000493886 COL3A1P02461 1466 aaPredicted RBP17.92■□□□□ 0.46
VCP-207ENST00000493886 ADAMTS13Q76LX8 1427 aa17.92■□□□□ 0.46
VCP-207ENST00000493886 IPO9Q96P70 1041 aaKnown RBP17.92■□□□□ 0.46
VCP-207ENST00000493886 LTKP29376 864 aa17.91■□□□□ 0.46
VCP-207ENST00000493886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.91■□□□□ 0.46
VCP-207ENST00000493886 PPIP5K1Q6PFW1 1433 aa17.91■□□□□ 0.46
VCP-207ENST00000493886 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
VCP-207ENST00000493886 CCDC27Q2M243 656 aa17.9■□□□□ 0.46
VCP-207ENST00000493886 CPSF1Q10570 1443 aaKnown RBP17.9■□□□□ 0.46
VCP-207ENST00000493886 C3P01024 1663 aa17.9■□□□□ 0.46
VCP-207ENST00000493886 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.46
VCP-207ENST00000493886 WDR63Q8IWG1 891 aa17.89■□□□□ 0.46
VCP-207ENST00000493886 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.46
VCP-207ENST00000493886 U2SURPO15042 1029 aaKnown RBP17.89■□□□□ 0.45
VCP-207ENST00000493886 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
VCP-207ENST00000493886 ADGRB2O60241 1585 aa17.88■□□□□ 0.45
VCP-207ENST00000493886 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
VCP-207ENST00000493886 PNPLA6Q8IY17 1366 aa17.88■□□□□ 0.45
VCP-207ENST00000493886 EDC4Q6P2E9 1401 aaKnown RBP17.87■□□□□ 0.45
VCP-207ENST00000493886 BCAR3O75815 825 aa17.87■□□□□ 0.45
VCP-207ENST00000493886 CCDC61Q9Y6R9 512 aa17.87■□□□□ 0.45
VCP-207ENST00000493886 FER1L4A9Z1Z3 1794 aa17.87■□□□□ 0.45
VCP-207ENST00000493886 TRHP20396 242 aaPredicted RBP17.87■□□□□ 0.45
VCP-207ENST00000493886 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
VCP-207ENST00000493886 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
VCP-207ENST00000493886 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
VCP-207ENST00000493886 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
VCP-207ENST00000493886 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
VCP-207ENST00000493886 NCKAP5LQ9HCH0 1330 aa17.85■□□□□ 0.45
VCP-207ENST00000493886 KLHL34Q8N239 644 aa17.85■□□□□ 0.45
VCP-207ENST00000493886 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
VCP-207ENST00000493886 PDE4AP27815 886 aa17.84■□□□□ 0.45
VCP-207ENST00000493886 SLIT1O75093 1534 aa17.84■□□□□ 0.45
VCP-207ENST00000493886 ARHGAP23Q9P227 1491 aa17.83■□□□□ 0.45
VCP-207ENST00000493886 POLKQ9UBT6 870 aa17.83■□□□□ 0.45
VCP-207ENST00000493886 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
VCP-207ENST00000493886 SLC26A8Q96RN1 970 aa17.83■□□□□ 0.44
VCP-207ENST00000493886 FBLN1P23142 703 aa17.82■□□□□ 0.44
VCP-207ENST00000493886 NME9Q86XW9 330 aa17.82■□□□□ 0.44
VCP-207ENST00000493886 MON2Q7Z3U7 1717 aa17.82■□□□□ 0.44
VCP-207ENST00000493886 MAPK8IP3Q9UPT6 1336 aa17.82■□□□□ 0.44
VCP-207ENST00000493886 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.82■□□□□ 0.44
VCP-207ENST00000493886 TMPOP42166 694 aaKnown RBP17.82■□□□□ 0.44
VCP-207ENST00000493886 TCERG1O14776 1098 aaKnown RBP17.81■□□□□ 0.44
VCP-207ENST00000493886 PDE4CQ08493 712 aa17.81■□□□□ 0.44
VCP-207ENST00000493886 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
VCP-207ENST00000493886 PTPRUQ92729 1446 aa17.81■□□□□ 0.44
VCP-207ENST00000493886 AKAP12Q02952 1782 aa17.81■□□□□ 0.44
VCP-207ENST00000493886 PPM1GO15355 546 aaPredicted RBP17.81■□□□□ 0.44
VCP-207ENST00000493886 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
VCP-207ENST00000493886 LAS1LQ9Y4W2 734 aaKnown RBP17.81■□□□□ 0.44
VCP-207ENST00000493886 ITSN1Q15811 1721 aa17.8■□□□□ 0.44
VCP-207ENST00000493886 ZNF692Q9BU19 519 aaPredicted RBP17.8■□□□□ 0.44
VCP-207ENST00000493886 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
VCP-207ENST00000493886 THEMISQ8N1K5 641 aaPredicted RBP17.79■□□□□ 0.44
VCP-207ENST00000493886 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
VCP-207ENST00000493886 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
VCP-207ENST00000493886 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
VCP-207ENST00000493886 COG3Q96JB2 828 aa17.78■□□□□ 0.44
VCP-207ENST00000493886 TRIM35Q9UPQ4 493 aa17.78■□□□□ 0.44
VCP-207ENST00000493886 TBX22Q9Y458 520 aa17.78■□□□□ 0.44
VCP-207ENST00000493886 KDM2BQ8NHM5 1336 aa17.78■□□□□ 0.44
VCP-207ENST00000493886 PDE3AQ14432 1141 aa17.78■□□□□ 0.44
VCP-207ENST00000493886 IL27Q8NEV9 243 aa17.78■□□□□ 0.44
VCP-207ENST00000493886 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
VCP-207ENST00000493886 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.44
VCP-207ENST00000493886 FCHSD2O94868 740 aa17.77■□□□□ 0.44
VCP-207ENST00000493886 BACH2Q9BYV9 841 aa17.77■□□□□ 0.44
VCP-207ENST00000493886 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.43
VCP-207ENST00000493886 AMOTL2Q9Y2J4 779 aa17.77■□□□□ 0.43
VCP-207ENST00000493886 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
VCP-207ENST00000493886 CENPQQ7L2Z9 268 aaPredicted RBP17.75■□□□□ 0.43
VCP-207ENST00000493886 LRRC7Q96NW7 1537 aa17.75■□□□□ 0.43
VCP-207ENST00000493886 TOPAZ1Q8N9V7 1692 aa17.75■□□□□ 0.43
VCP-207ENST00000493886 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
VCP-207ENST00000493886 RIPK4P57078 832 aa17.75■□□□□ 0.43
VCP-207ENST00000493886 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
VCP-207ENST00000493886 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
VCP-207ENST00000493886 NUTM2FA1L443 756 aa17.74■□□□□ 0.43
VCP-207ENST00000493886 MS4A1P11836 297 aa17.74■□□□□ 0.43
VCP-207ENST00000493886 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
VCP-207ENST00000493886 ACEP12821 1306 aa17.73■□□□□ 0.43
VCP-207ENST00000493886 PTCH1Q13635 1447 aa17.73■□□□□ 0.43
VCP-207ENST00000493886 PRKAR2BP31323 418 aa17.73■□□□□ 0.43
VCP-207ENST00000493886 DIP2AQ14689 1571 aa17.73■□□□□ 0.43
VCP-207ENST00000493886 IL16Q14005 1332 aa17.73■□□□□ 0.43
VCP-207ENST00000493886 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
VCP-207ENST00000493886 IL13P35225 146 aa17.72■□□□□ 0.43
VCP-207ENST00000493886 PANK1Q8TE04 598 aa17.72■□□□□ 0.43
VCP-207ENST00000493886 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
VCP-207ENST00000493886 NEFMP07197 916 aa17.71■□□□□ 0.43
VCP-207ENST00000493886 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
VCP-207ENST00000493886 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.43
VCP-207ENST00000493886 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
VCP-207ENST00000493886 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms