RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
RNF40-203ENST00000493683 HFM1A2PYH4 1435 aa24.02■■□□□ 1.44
RNF40-203ENST00000493683 SURF6O75683 361 aaKnown RBP24.02■■□□□ 1.44
RNF40-203ENST00000493683 PDIA4P13667 645 aaKnown RBP24.02■■□□□ 1.44
RNF40-203ENST00000493683 CYB5RLQ6IPT4 315 aa24.02■■□□□ 1.44
RNF40-203ENST00000493683 MTHFSP49914 203 aa24.02■■□□□ 1.44
RNF40-203ENST00000493683 RNF214Q8ND24 703 aa24.02■■□□□ 1.44
RNF40-203ENST00000493683 GNAI2P04899 355 aa24■■□□□ 1.43
RNF40-203ENST00000493683 FOSBP53539 338 aa24■■□□□ 1.43
RNF40-203ENST00000493683 MAGEC2Q9UBF1 373 aaPredicted RBP24■■□□□ 1.43
RNF40-203ENST00000493683 SMC2O95347 1197 aa24■■□□□ 1.43
RNF40-203ENST00000493683 SLC3A2P08195 630 aaKnown RBP24■■□□□ 1.43
RNF40-203ENST00000493683 TXLNBQ8N3L3 684 aa24■■□□□ 1.43
RNF40-203ENST00000493683 DACH1Q9UI36 760 aa24■■□□□ 1.43
RNF40-203ENST00000493683 PRPF40AO75400 957 aaKnown RBP23.99■■□□□ 1.43
RNF40-203ENST00000493683 CCDC192P0DO97 292 aa23.99■■□□□ 1.43
RNF40-203ENST00000493683 SYTL4Q96C24 671 aaPredicted RBP23.99■■□□□ 1.43
RNF40-203ENST00000493683 WDR33Q9C0J8 1336 aaKnown RBP23.99■■□□□ 1.43
RNF40-203ENST00000493683 KIF21BO75037 1637 aa23.99■■□□□ 1.43
RNF40-203ENST00000493683 CIZ1Q9ULV3 898 aaPredicted RBP23.99■■□□□ 1.43
RNF40-203ENST00000493683 ATF3P18847 181 aa23.98■■□□□ 1.43
RNF40-203ENST00000493683 H0YHG0 523 aa23.98■■□□□ 1.43
RNF40-203ENST00000493683 CCT4P50991 539 aaKnown RBP23.98■■□□□ 1.43
RNF40-203ENST00000493683 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
RNF40-203ENST00000493683 NCOA2Q15596 1464 aa23.97■■□□□ 1.43
RNF40-203ENST00000493683 TWISTNBQ3B726 338 aaPredicted RBP23.97■■□□□ 1.43
RNF40-203ENST00000493683 WDR63Q8IWG1 891 aa23.97■■□□□ 1.43
RNF40-203ENST00000493683 STK38Q15208 465 aa23.96■■□□□ 1.43
RNF40-203ENST00000493683 LUC7LQ9NQ29 371 aaKnown RBP23.96■■□□□ 1.43
RNF40-203ENST00000493683 SRCIN1Q9C0H9 1055 aa23.96■■□□□ 1.43
RNF40-203ENST00000493683 AIMP1Q12904 312 aaKnown RBP23.96■■□□□ 1.43
RNF40-203ENST00000493683 PLEKHO1Q53GL0 409 aaPredicted RBP23.95■■□□□ 1.43
RNF40-203ENST00000493683 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.43
RNF40-203ENST00000493683 CYP46A1Q9Y6A2 500 aa23.95■■□□□ 1.43
RNF40-203ENST00000493683 EXOSC9Q06265 439 aaKnown RBP23.95■■□□□ 1.42
RNF40-203ENST00000493683 LEKR1Q6ZMV7 388 aa23.95■■□□□ 1.42
RNF40-203ENST00000493683 CCDC27Q2M243 656 aa23.95■■□□□ 1.42
RNF40-203ENST00000493683 PNISRQ8TF01 805 aaKnown RBP23.95■■□□□ 1.42
RNF40-203ENST00000493683 CABP2Q9NPB3 220 aa23.95■■□□□ 1.42
RNF40-203ENST00000493683 ZNHIT6Q9NWK9 470 aaKnown RBP23.94■■□□□ 1.42
RNF40-203ENST00000493683 K7ELQ4 463 aaPredicted RBP23.94■■□□□ 1.42
RNF40-203ENST00000493683 BACH2Q9BYV9 841 aa23.93■■□□□ 1.42
RNF40-203ENST00000493683 MEX3CQ5U5Q3 659 aaKnown RBP23.92■■□□□ 1.42
RNF40-203ENST00000493683 CDK5RAP3Q96JB5 506 aa23.92■■□□□ 1.42
RNF40-203ENST00000493683 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
RNF40-203ENST00000493683 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.92■■□□□ 1.422e-6■□□□□ 10.9
RNF40-203ENST00000493683 SMG6Q86US8 1419 aaKnown RBP23.92■■□□□ 1.42
RNF40-203ENST00000493683 ERLIN2O94905 339 aa23.92■■□□□ 1.42
RNF40-203ENST00000493683 NLRP2Q9NX02 1062 aa23.92■■□□□ 1.42
RNF40-203ENST00000493683 PRKAR2BP31323 418 aa23.92■■□□□ 1.42
RNF40-203ENST00000493683 CBFA2T2O43439 604 aa23.91■■□□□ 1.42
RNF40-203ENST00000493683 GPRASP1Q5JY77 1395 aa23.91■■□□□ 1.42
RNF40-203ENST00000493683 KRT85P78386 507 aa23.91■■□□□ 1.42
RNF40-203ENST00000493683 NLRP6P59044 892 aa23.91■■□□□ 1.42
RNF40-203ENST00000493683 FIBPO43427 364 aa23.9■■□□□ 1.42
RNF40-203ENST00000493683 CCAR1Q8IX12 1150 aaKnown RBP23.9■■□□□ 1.42
RNF40-203ENST00000493683 CCDC158Q5M9N0 1113 aa23.9■■□□□ 1.42
RNF40-203ENST00000493683 CDCA7LQ96GN5 454 aa23.9■■□□□ 1.42
RNF40-203ENST00000493683 ZSCAN31Q96LW9 406 aaPredicted RBP23.9■■□□□ 1.42
RNF40-203ENST00000493683 LRRCC1Q9C099 1032 aa23.9■■□□□ 1.42
RNF40-203ENST00000493683 ERLIN1O75477 346 aa23.89■■□□□ 1.41
RNF40-203ENST00000493683 STIM1Q13586 685 aa23.89■■□□□ 1.41
RNF40-203ENST00000493683 DNAJC2Q99543 621 aaKnown RBP23.89■■□□□ 1.41
RNF40-203ENST00000493683 TNMDQ9H2S6 317 aa23.88■■□□□ 1.41
RNF40-203ENST00000493683 NOB1Q9ULX3 412 aaKnown RBP23.88■■□□□ 1.41
RNF40-203ENST00000493683 KIF6Q6ZMV9 814 aa23.88■■□□□ 1.41
RNF40-203ENST00000493683 TRIM22Q8IYM9 498 aa23.88■■□□□ 1.41
RNF40-203ENST00000493683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.88■■□□□ 1.411e-6■■■■■ 74.2
RNF40-203ENST00000493683 CCDC112Q8NEF3 446 aa23.88■■□□□ 1.41
RNF40-203ENST00000493683 FAM69CQ0P6D2 419 aa23.87■■□□□ 1.41
RNF40-203ENST00000493683 PPFIBP1Q86W92 1011 aa23.87■■□□□ 1.41
RNF40-203ENST00000493683 GNL3LQ9NVN8 582 aaKnown RBP23.87■■□□□ 1.41
RNF40-203ENST00000493683 ZNF644Q9H582 1327 aaPredicted RBP23.87■■□□□ 1.41
RNF40-203ENST00000493683 ZFYVE27Q5T4F4 411 aa23.87■■□□□ 1.41
RNF40-203ENST00000493683 GRPEL1Q9HAV7 217 aa23.87■■□□□ 1.41
RNF40-203ENST00000493683 SERPINC1P01008 464 aa23.86■■□□□ 1.41
RNF40-203ENST00000493683 SYCP1Q15431 976 aa23.86■■□□□ 1.41
RNF40-203ENST00000493683 ERICH3Q5RHP9 1530 aa23.86■■□□□ 1.41
RNF40-203ENST00000493683 EIF3JO75822 258 aaKnown RBP23.86■■□□□ 1.41
RNF40-203ENST00000493683 MVPQ14764 893 aaKnown RBP23.86■■□□□ 1.41
RNF40-203ENST00000493683 FYB1O15117 783 aa23.85■■□□□ 1.41
RNF40-203ENST00000493683 ZSCAN25Q6NSZ9 544 aa23.85■■□□□ 1.41
RNF40-203ENST00000493683 NACAP1Q9BZK3 213 aa23.85■■□□□ 1.41
RNF40-203ENST00000493683 GOLGA6L10A6NI86 522 aa23.85■■□□□ 1.41
RNF40-203ENST00000493683 ATF7IPQ6VMQ6 1270 aa23.85■■□□□ 1.41
RNF40-203ENST00000493683 ZNF692Q9BU19 519 aaPredicted RBP23.85■■□□□ 1.41
RNF40-203ENST00000493683 CDKL5O76039 1030 aa23.84■■□□□ 1.41
RNF40-203ENST00000493683 TTC39AQ5SRH9 613 aa23.84■■□□□ 1.41
RNF40-203ENST00000493683 AXDND1Q5T1B0 1012 aaPredicted RBP23.84■■□□□ 1.41
RNF40-203ENST00000493683 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
RNF40-203ENST00000493683 FMNL2Q96PY5 1086 aa23.83■■□□□ 1.41
RNF40-203ENST00000493683 PLEKHH2Q8IVE3 1493 aa23.83■■□□□ 1.41
RNF40-203ENST00000493683 TTLL5Q6EMB2 1281 aa23.83■■□□□ 1.41
RNF40-203ENST00000493683 IQCEQ6IPM2 695 aa23.83■■□□□ 1.41
RNF40-203ENST00000493683 CFAP45Q9UL16 551 aa23.83■■□□□ 1.41
RNF40-203ENST00000493683 ZRSR2Q15696 482 aaKnown RBP23.83■■□□□ 1.4
RNF40-203ENST00000493683 KRT32Q14532 448 aa23.82■■□□□ 1.4
RNF40-203ENST00000493683 CNKSR2Q8WXI2 1034 aa23.82■■□□□ 1.4
RNF40-203ENST00000493683 ARHGAP5Q13017 1502 aa23.81■■□□□ 1.4
RNF40-203ENST00000493683 CHD1LQ86WJ1 897 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms