RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 TOPAZ1Q8N9V7 1692 aa14.11□□□□□ -0.15
PHACTR4-204ENST00000493669 U2AF1L5P0DN76 240 aaPredicted RBP14.11□□□□□ -0.15
PHACTR4-204ENST00000493669 U2AF1Q01081 240 aaKnown RBP eCLIP14.11□□□□□ -0.15
PHACTR4-204ENST00000493669 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
PHACTR4-204ENST00000493669 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
PHACTR4-204ENST00000493669 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.11□□□□□ -0.15
PHACTR4-204ENST00000493669 AATKQ6ZMQ8 1374 aa14.1□□□□□ -0.15
PHACTR4-204ENST00000493669 RBM19Q9Y4C8 960 aaKnown RBP14.1□□□□□ -0.15
PHACTR4-204ENST00000493669 SPINK5Q9NQ38 1064 aaPredicted RBP14.1□□□□□ -0.15
PHACTR4-204ENST00000493669 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
PHACTR4-204ENST00000493669 CEP170BQ9Y4F5 1589 aaPredicted RBP14.09□□□□□ -0.15
PHACTR4-204ENST00000493669 DIAPH1O60610 1272 aaKnown RBP14.09□□□□□ -0.15
PHACTR4-204ENST00000493669 PIK3R4Q99570 1358 aa14.08□□□□□ -0.15
PHACTR4-204ENST00000493669 CDK12Q9NYV4 1490 aaPredicted RBP14.07□□□□□ -0.16
PHACTR4-204ENST00000493669 XRN1Q8IZH2 1706 aaKnown RBP14.07□□□□□ -0.16
PHACTR4-204ENST00000493669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.07□□□□□ -0.16
PHACTR4-204ENST00000493669 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
PHACTR4-204ENST00000493669 PLIN1O60240 522 aa14.07□□□□□ -0.16
PHACTR4-204ENST00000493669 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
PHACTR4-204ENST00000493669 NRKQ7Z2Y5 1582 aa14.07□□□□□ -0.16
PHACTR4-204ENST00000493669 PLEKHG3A1L390 1219 aa14.06□□□□□ -0.16
PHACTR4-204ENST00000493669 CRBNQ96SW2 442 aa14.06□□□□□ -0.16
PHACTR4-204ENST00000493669 DMRT2Q9Y5R5 561 aa14.06□□□□□ -0.16
PHACTR4-204ENST00000493669 ZNF142P52746 1687 aaPredicted RBP14.06□□□□□ -0.16
PHACTR4-204ENST00000493669 MAPK8IP3Q9UPT6 1336 aa14.06□□□□□ -0.16
PHACTR4-204ENST00000493669 MYH16Q9H6N6 1097 aa14.06□□□□□ -0.16
PHACTR4-204ENST00000493669 POLKQ9UBT6 870 aa14.06□□□□□ -0.16
PHACTR4-204ENST00000493669 RIMS1Q86UR5 1692 aaKnown RBP14.05□□□□□ -0.16
PHACTR4-204ENST00000493669 U2SURPO15042 1029 aaKnown RBP14.05□□□□□ -0.16
PHACTR4-204ENST00000493669 SLC26A8Q96RN1 970 aa14.05□□□□□ -0.16
PHACTR4-204ENST00000493669 AMOTL2Q9Y2J4 779 aa14.05□□□□□ -0.16
PHACTR4-204ENST00000493669 FCHSD2O94868 740 aa14.04□□□□□ -0.16
PHACTR4-204ENST00000493669 COG3Q96JB2 828 aa14.04□□□□□ -0.16
PHACTR4-204ENST00000493669 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
PHACTR4-204ENST00000493669 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
PHACTR4-204ENST00000493669 ADAMTSL3P82987 1691 aa14.04□□□□□ -0.16
PHACTR4-204ENST00000493669 IL16Q14005 1332 aa14.04□□□□□ -0.16
PHACTR4-204ENST00000493669 CT47B1P0C2W7 299 aaPredicted RBP14.04□□□□□ -0.16
PHACTR4-204ENST00000493669 NEUROD2Q15784 382 aa14.03□□□□□ -0.16
PHACTR4-204ENST00000493669 NME9Q86XW9 330 aa14.03□□□□□ -0.16
PHACTR4-204ENST00000493669 TMPOP42166 694 aaKnown RBP14.03□□□□□ -0.16
PHACTR4-204ENST00000493669 USP6P35125 1406 aa14.02□□□□□ -0.17
PHACTR4-204ENST00000493669 LRRC7Q96NW7 1537 aa14.02□□□□□ -0.17
PHACTR4-204ENST00000493669 PDE3AQ14432 1141 aa14.02□□□□□ -0.17
PHACTR4-204ENST00000493669 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
PHACTR4-204ENST00000493669 ANKARQ7Z5J8 1434 aa14.01□□□□□ -0.17
PHACTR4-204ENST00000493669 OVOS2A0A0J9YW53 1432 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 OVOS2Q6IE36 1432 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 TTC21BQ7Z4L5 1316 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 NALCNQ8IZF0 1738 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 ACEP12821 1306 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 NCKAP5LQ9HCH0 1330 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 FANCIQ9NVI1 1328 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 NEFMP07197 916 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 SSH2Q76I76 1423 aa14□□□□□ -0.17
PHACTR4-204ENST00000493669 RSPH6AQ9H0K4 717 aa13.99□□□□□ -0.17
PHACTR4-204ENST00000493669 TTC21AQ8NDW8 1320 aa13.99□□□□□ -0.17
PHACTR4-204ENST00000493669 TCERG1O14776 1098 aaKnown RBP13.99□□□□□ -0.17
PHACTR4-204ENST00000493669 BCAR3O75815 825 aa13.99□□□□□ -0.17
PHACTR4-204ENST00000493669 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
PHACTR4-204ENST00000493669 IL13P35225 146 aa13.98□□□□□ -0.17
PHACTR4-204ENST00000493669 RARSP54136 660 aaKnown RBP13.98□□□□□ -0.17
PHACTR4-204ENST00000493669 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
PHACTR4-204ENST00000493669 AAMPQ13685 434 aa13.98□□□□□ -0.17
PHACTR4-204ENST00000493669 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
PHACTR4-204ENST00000493669 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
PHACTR4-204ENST00000493669 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
PHACTR4-204ENST00000493669 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
PHACTR4-204ENST00000493669 PPM1GO15355 546 aaPredicted RBP13.96□□□□□ -0.17
PHACTR4-204ENST00000493669 RIPK4P57078 832 aa13.96□□□□□ -0.17
PHACTR4-204ENST00000493669 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
PHACTR4-204ENST00000493669 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
PHACTR4-204ENST00000493669 MS4A1P11836 297 aa13.96□□□□□ -0.17
PHACTR4-204ENST00000493669 FMN2Q9NZ56 1722 aa13.96□□□□□ -0.17
PHACTR4-204ENST00000493669 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.18
PHACTR4-204ENST00000493669 PRKAR2BP31323 418 aa13.95□□□□□ -0.18
PHACTR4-204ENST00000493669 CHD2O14647 1828 aaKnown RBP13.95□□□□□ -0.18
PHACTR4-204ENST00000493669 CALD1Q05682 793 aaKnown RBP13.95□□□□□ -0.18
PHACTR4-204ENST00000493669 CANXP27824 592 aaKnown RBP13.94□□□□□ -0.18
PHACTR4-204ENST00000493669 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
PHACTR4-204ENST00000493669 KCNA6P17658 529 aa13.94□□□□□ -0.18
PHACTR4-204ENST00000493669 FBLN1P23142 703 aa13.93□□□□□ -0.18
PHACTR4-204ENST00000493669 USP54Q70EL1 1684 aa13.93□□□□□ -0.18
PHACTR4-204ENST00000493669 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
PHACTR4-204ENST00000493669 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
PHACTR4-204ENST00000493669 ZNF428Q96B54 188 aa13.91□□□□□ -0.18
PHACTR4-204ENST00000493669 RGPD8O14715 1765 aaPredicted RBP13.91□□□□□ -0.18
PHACTR4-204ENST00000493669 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
PHACTR4-204ENST00000493669 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
PHACTR4-204ENST00000493669 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.19
PHACTR4-204ENST00000493669 EXOSC9Q06265 439 aaKnown RBP13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 HMOX1P09601 288 aa13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 TSR2Q969E8 191 aaKnown RBP13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 PEAK1Q9H792 1746 aa13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 KIF24Q5T7B8 1368 aa13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 PIK3C2AO00443 1686 aa13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 CLUAP1Q96AJ1 413 aa13.89□□□□□ -0.19
PHACTR4-204ENST00000493669 NPHP4O75161 1426 aaPredicted RBP13.88□□□□□ -0.19
PHACTR4-204ENST00000493669 ZKSCAN2Q63HK3 967 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms