RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 ARHGEF28Q8N1W1 1705 aaKnown RBP17.83■□□□□ 0.45
ZIC4-215ENST00000493664 MINK1Q8N4C8 1332 aaPredicted RBP17.83■□□□□ 0.44
ZIC4-215ENST00000493664 C22orf23Q9BZE7 217 aa17.82■□□□□ 0.44
ZIC4-215ENST00000493664 SIGLEC1Q9BZZ2 1709 aa17.82■□□□□ 0.44
ZIC4-215ENST00000493664 RIPK4P57078 832 aa17.82■□□□□ 0.44
ZIC4-215ENST00000493664 ATF7IPQ6VMQ6 1270 aa17.82■□□□□ 0.44
ZIC4-215ENST00000493664 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
ZIC4-215ENST00000493664 ADGRB2O60241 1585 aa17.82■□□□□ 0.44
ZIC4-215ENST00000493664 FBLN1P23142 703 aa17.81■□□□□ 0.44
ZIC4-215ENST00000493664 IDI1Q13907 227 aa17.81■□□□□ 0.44
ZIC4-215ENST00000493664 ABCC3O15438 1527 aa17.81■□□□□ 0.44
ZIC4-215ENST00000493664 NSD2O96028 1365 aa17.81■□□□□ 0.44
ZIC4-215ENST00000493664 CAMSAP1Q5T5Y3 1602 aa17.81■□□□□ 0.44
ZIC4-215ENST00000493664 POGZQ7Z3K3 1410 aa17.8■□□□□ 0.44
ZIC4-215ENST00000493664 FYB1O15117 783 aa17.8■□□□□ 0.44
ZIC4-215ENST00000493664 GZF1Q9H116 711 aaPredicted RBP17.8■□□□□ 0.44
ZIC4-215ENST00000493664 DDX19BQ9UMR2 479 aa17.79■□□□□ 0.44
ZIC4-215ENST00000493664 ABCC11Q96J66 1382 aa17.79■□□□□ 0.44
ZIC4-215ENST00000493664 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
ZIC4-215ENST00000493664 HECW2Q9P2P5 1572 aa17.78■□□□□ 0.44
ZIC4-215ENST00000493664 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
ZIC4-215ENST00000493664 HDAC1Q13547 482 aaPredicted RBP17.78■□□□□ 0.44
ZIC4-215ENST00000493664 NEXMIFQ5QGS0 1516 aa17.78■□□□□ 0.44
ZIC4-215ENST00000493664 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.44
ZIC4-215ENST00000493664 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
ZIC4-215ENST00000493664 CT47B1P0C2W7 299 aaPredicted RBP17.77■□□□□ 0.44
ZIC4-215ENST00000493664 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
ZIC4-215ENST00000493664 MLH3Q9UHC1 1453 aa17.76■□□□□ 0.43
ZIC4-215ENST00000493664 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
ZIC4-215ENST00000493664 COL3A1P02461 1466 aaPredicted RBP17.75■□□□□ 0.43
ZIC4-215ENST00000493664 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
ZIC4-215ENST00000493664 ZBTB40Q9NUA8 1239 aa17.75■□□□□ 0.43
ZIC4-215ENST00000493664 SMC5Q8IY18 1101 aa17.75■□□□□ 0.43
ZIC4-215ENST00000493664 MCM4P33991 863 aa17.74■□□□□ 0.43
ZIC4-215ENST00000493664 TERF2IPQ9NYB0 399 aa17.73■□□□□ 0.43
ZIC4-215ENST00000493664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.73■□□□□ 0.43
ZIC4-215ENST00000493664 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
ZIC4-215ENST00000493664 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
ZIC4-215ENST00000493664 C1orf115Q9H7X2 142 aa17.72■□□□□ 0.43
ZIC4-215ENST00000493664 CABP1Q9NZU7 370 aa17.72■□□□□ 0.43
ZIC4-215ENST00000493664 MYO5BQ9ULV0 1848 aa17.71■□□□□ 0.43
ZIC4-215ENST00000493664 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.43
ZIC4-215ENST00000493664 PIK3C2BO00750 1634 aa17.71■□□□□ 0.43
ZIC4-215ENST00000493664 HMOX1P09601 288 aa17.7■□□□□ 0.42
ZIC4-215ENST00000493664 PRKAR2BP31323 418 aa17.7■□□□□ 0.42
ZIC4-215ENST00000493664 CD163L1Q9NR16 1453 aa17.7■□□□□ 0.42
ZIC4-215ENST00000493664 CHMP5Q9NZZ3 219 aa17.7■□□□□ 0.42
ZIC4-215ENST00000493664 FAM69CQ0P6D2 419 aa17.7■□□□□ 0.42
ZIC4-215ENST00000493664 KIF16BQ96L93 1317 aa17.7■□□□□ 0.42
ZIC4-215ENST00000493664 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
ZIC4-215ENST00000493664 IL16Q14005 1332 aa17.69■□□□□ 0.42
ZIC4-215ENST00000493664 IPO8O15397 1037 aaKnown RBP17.69■□□□□ 0.42
ZIC4-215ENST00000493664 XRCC6P12956 609 aaKnown RBP eCLIP17.69■□□□□ 0.42
ZIC4-215ENST00000493664 HSCBQ8IWL3 235 aa17.69■□□□□ 0.42
ZIC4-215ENST00000493664 PANK2Q9BZ23 570 aa17.69■□□□□ 0.42
ZIC4-215ENST00000493664 NUCB1Q02818 461 aa17.69■□□□□ 0.42
ZIC4-215ENST00000493664 L1TD1Q5T7N2 865 aaKnown RBP17.69■□□□□ 0.42
ZIC4-215ENST00000493664 RRAGDQ9NQL2 400 aaPredicted RBP17.69■□□□□ 0.42
ZIC4-215ENST00000493664 PHACTR3Q96KR7 559 aa17.68■□□□□ 0.42
ZIC4-215ENST00000493664 PTPRMP28827 1452 aa17.68■□□□□ 0.42
ZIC4-215ENST00000493664 ATAD2Q6PL18 1390 aa17.68■□□□□ 0.42
ZIC4-215ENST00000493664 TRAK2O60296 914 aa17.67■□□□□ 0.42
ZIC4-215ENST00000493664 FBXO31Q5XUX0 539 aaPredicted RBP17.67■□□□□ 0.42
ZIC4-215ENST00000493664 HDGFL2Q7Z4V5 671 aaPredicted RBP17.67■□□□□ 0.42
ZIC4-215ENST00000493664 CHD1LQ86WJ1 897 aa17.67■□□□□ 0.42
ZIC4-215ENST00000493664 GOLGA6L3A6NEY3 463 aa17.67■□□□□ 0.42
ZIC4-215ENST00000493664 TSPYL6Q8N831 410 aa17.67■□□□□ 0.42
ZIC4-215ENST00000493664 ANKRD45Q5TZF3 282 aa17.67■□□□□ 0.42
ZIC4-215ENST00000493664 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
ZIC4-215ENST00000493664 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
ZIC4-215ENST00000493664 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
ZIC4-215ENST00000493664 SLC52A1Q9NWF4 448 aa17.65■□□□□ 0.42
ZIC4-215ENST00000493664 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
ZIC4-215ENST00000493664 POLKQ9UBT6 870 aa17.65■□□□□ 0.42
ZIC4-215ENST00000493664 LRRC7Q96NW7 1537 aa17.65■□□□□ 0.42
ZIC4-215ENST00000493664 FCHSD2O94868 740 aa17.64■□□□□ 0.42
ZIC4-215ENST00000493664 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.42
ZIC4-215ENST00000493664 PNPLA6Q8IY17 1366 aa17.64■□□□□ 0.41
ZIC4-215ENST00000493664 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
ZIC4-215ENST00000493664 ZBTB7BO15156 539 aaPredicted RBP17.63■□□□□ 0.41
ZIC4-215ENST00000493664 CFAP74Q9C0B2 1584 aa17.63■□□□□ 0.41
ZIC4-215ENST00000493664 FSD2A1L4K1 749 aa17.63■□□□□ 0.41
ZIC4-215ENST00000493664 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
ZIC4-215ENST00000493664 EMILIN1Q9Y6C2 1016 aa17.63■□□□□ 0.41
ZIC4-215ENST00000493664 ANKRD26Q9UPS8 1709 aa17.63■□□□□ 0.41
ZIC4-215ENST00000493664 PPIP5K1Q6PFW1 1433 aa17.62■□□□□ 0.41
ZIC4-215ENST00000493664 YEATS2Q9ULM3 1422 aa17.62■□□□□ 0.41
ZIC4-215ENST00000493664 VAMP4O75379 141 aa17.62■□□□□ 0.41
ZIC4-215ENST00000493664 RBM25P49756 843 aaKnown RBP17.62■□□□□ 0.41
ZIC4-215ENST00000493664 DIP2BQ9P265 1576 aa17.62■□□□□ 0.41
ZIC4-215ENST00000493664 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
ZIC4-215ENST00000493664 CD2BP2O95400 341 aaKnown RBP17.62■□□□□ 0.41
ZIC4-215ENST00000493664 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
ZIC4-215ENST00000493664 ZFYVE9O95405 1425 aa17.61■□□□□ 0.41
ZIC4-215ENST00000493664 HSP90AB1P08238 724 aaKnown RBP17.61■□□□□ 0.41
ZIC4-215ENST00000493664 MRPL50Q8N5N7 158 aaKnown RBP17.61■□□□□ 0.41
ZIC4-215ENST00000493664 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
ZIC4-215ENST00000493664 ZRANB1Q9UGI0 708 aa17.61■□□□□ 0.41
ZIC4-215ENST00000493664 SIRT2Q8IXJ6 389 aa17.6■□□□□ 0.41
ZIC4-215ENST00000493664 MED14O60244 1454 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms