RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ZNF692Q9BU19 519 aaPredicted RBP21.68■■□□□ 1.06
HPS4-216ENST00000493455 NRKQ7Z2Y5 1582 aa21.68■■□□□ 1.06
HPS4-216ENST00000493455 KIF20BQ96Q89 1820 aa21.66■■□□□ 1.06
HPS4-216ENST00000493455 COL16A1Q07092 1604 aaPredicted RBP21.66■■□□□ 1.06
HPS4-216ENST00000493455 NUTM2GQ5VZR2 741 aa21.65■■□□□ 1.06
HPS4-216ENST00000493455 FBXO41Q8TF61 875 aa21.65■■□□□ 1.06
HPS4-216ENST00000493455 EDC4Q6P2E9 1401 aaKnown RBP21.64■■□□□ 1.06
HPS4-216ENST00000493455 HSPA1LP34931 641 aa21.64■■□□□ 1.05
HPS4-216ENST00000493455 CARD14Q9BXL6 1004 aa21.64■■□□□ 1.05
HPS4-216ENST00000493455 SOS2Q07890 1332 aaPredicted RBP21.63■■□□□ 1.05
HPS4-216ENST00000493455 TTC21BQ7Z4L5 1316 aa21.63■■□□□ 1.05
HPS4-216ENST00000493455 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
HPS4-216ENST00000493455 KNSTRNQ9Y448 316 aa21.62■■□□□ 1.05
HPS4-216ENST00000493455 PIK3C2AO00443 1686 aa21.61■■□□□ 1.05
HPS4-216ENST00000493455 ALS2Q96Q42 1657 aa21.61■■□□□ 1.05
HPS4-216ENST00000493455 NME9Q86XW9 330 aa21.61■■□□□ 1.05
HPS4-216ENST00000493455 ABTB2Q8N961 1025 aa21.61■■□□□ 1.05
HPS4-216ENST00000493455 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
HPS4-216ENST00000493455 SPATA31A3Q5VYP0 1347 aa21.59■■□□□ 1.05
HPS4-216ENST00000493455 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
HPS4-216ENST00000493455 ZRANB1Q9UGI0 708 aa21.59■■□□□ 1.05
HPS4-216ENST00000493455 TTC21AQ8NDW8 1320 aa21.58■■□□□ 1.05
HPS4-216ENST00000493455 SSH2Q76I76 1423 aa21.58■■□□□ 1.05
HPS4-216ENST00000493455 GGNBP2Q9H3C7 697 aa21.58■■□□□ 1.05
HPS4-216ENST00000493455 CGNL1Q0VF96 1302 aa21.57■■□□□ 1.04
HPS4-216ENST00000493455 NLRP6P59044 892 aa21.57■■□□□ 1.04
HPS4-216ENST00000493455 BRD4O60885 1362 aaPredicted RBP21.57■■□□□ 1.04
HPS4-216ENST00000493455 SOX12O15370 315 aa21.56■■□□□ 1.04
HPS4-216ENST00000493455 CC2D1BQ5T0F9 858 aaKnown RBP21.56■■□□□ 1.04
HPS4-216ENST00000493455 ARHGEF10O15013 1369 aa21.55■■□□□ 1.04
HPS4-216ENST00000493455 HAP1P54257 671 aaPredicted RBP21.54■■□□□ 1.04
HPS4-216ENST00000493455 ANKRD26Q9UPS8 1709 aa21.54■■□□□ 1.04
HPS4-216ENST00000493455 PNPLA6Q8IY17 1366 aa21.53■■□□□ 1.04
HPS4-216ENST00000493455 MARF1Q9Y4F3 1742 aaKnown RBP21.53■■□□□ 1.04
HPS4-216ENST00000493455 FYB1O15117 783 aa21.53■■□□□ 1.04
HPS4-216ENST00000493455 CABLES1Q8TDN4 633 aa21.53■■□□□ 1.04
HPS4-216ENST00000493455 SHPRHQ149N8 1683 aa21.53■■□□□ 1.04
HPS4-216ENST00000493455 PER1O15534 1290 aaPredicted RBP21.52■■□□□ 1.04
HPS4-216ENST00000493455 NLRP13Q86W25 1043 aa21.52■■□□□ 1.04
HPS4-216ENST00000493455 COG3Q96JB2 828 aa21.52■■□□□ 1.04
HPS4-216ENST00000493455 NUTM2BA6NNL0 878 aaPredicted RBP21.51■■□□□ 1.03
HPS4-216ENST00000493455 NUTM2EB1AL46 878 aaPredicted RBP21.51■■□□□ 1.03
HPS4-216ENST00000493455 NUTM2AQ8IVF1 878 aaPredicted RBP21.51■■□□□ 1.03
HPS4-216ENST00000493455 ABCA3Q99758 1704 aa21.51■■□□□ 1.03
HPS4-216ENST00000493455 PHRF1Q9P1Y6 1649 aaKnown RBP21.51■■□□□ 1.03
HPS4-216ENST00000493455 JCADQ9P266 1359 aa21.5■■□□□ 1.03
HPS4-216ENST00000493455 ZBTB7CA1YPR0 619 aa21.5■■□□□ 1.03
HPS4-216ENST00000493455 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
HPS4-216ENST00000493455 MED1Q15648 1581 aaPredicted RBP21.49■■□□□ 1.03
HPS4-216ENST00000493455 COL22A1Q8NFW1 1626 aaPredicted RBP21.49■■□□□ 1.03
HPS4-216ENST00000493455 AMER1Q5JTC6 1135 aaPredicted RBP21.49■■□□□ 1.03
HPS4-216ENST00000493455 CRYBG1Q9Y4K1 1723 aa21.49■■□□□ 1.03
HPS4-216ENST00000493455 MORC1Q86VD1 984 aa21.48■■□□□ 1.03
HPS4-216ENST00000493455 OVOS2A0A0J9YW53 1432 aa21.47■■□□□ 1.03
HPS4-216ENST00000493455 OVOS2Q6IE36 1432 aa21.47■■□□□ 1.03
HPS4-216ENST00000493455 USP54Q70EL1 1684 aa21.47■■□□□ 1.03
HPS4-216ENST00000493455 NSD2O96028 1365 aa21.47■■□□□ 1.03
HPS4-216ENST00000493455 USP31Q70CQ4 1352 aa21.47■■□□□ 1.03
HPS4-216ENST00000493455 FBLN1P23142 703 aa21.44■■□□□ 1.02
HPS4-216ENST00000493455 ILDR1Q86SU0 546 aaPredicted RBP21.44■■□□□ 1.02
HPS4-216ENST00000493455 USP19O94966 1318 aa21.43■■□□□ 1.02
HPS4-216ENST00000493455 SLIT3O75094 1523 aa21.43■■□□□ 1.02
HPS4-216ENST00000493455 LTN1O94822 1766 aa21.43■■□□□ 1.02
HPS4-216ENST00000493455 ADAMTS2O95450 1211 aa21.42■■□□□ 1.02
HPS4-216ENST00000493455 ZC3H6P61129 1189 aaKnown RBP21.42■■□□□ 1.02
HPS4-216ENST00000493455 MAP2P11137 1827 aaKnown RBP21.41■■□□□ 1.02
HPS4-216ENST00000493455 GCP02774 474 aa21.41■■□□□ 1.02
HPS4-216ENST00000493455 KCNH5Q8NCM2 988 aa21.4■■□□□ 1.02
HPS4-216ENST00000493455 NPC1L1Q9UHC9 1359 aa21.39■■□□□ 1.02
HPS4-216ENST00000493455 MEX3CQ5U5Q3 659 aaKnown RBP21.39■■□□□ 1.01
HPS4-216ENST00000493455 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
HPS4-216ENST00000493455 NFAT5O94916 1531 aa21.39■■□□□ 1.01
HPS4-216ENST00000493455 SPATA31A6Q5VVP1 1343 aa21.38■■□□□ 1.01
HPS4-216ENST00000493455 RRS1Q15050 365 aaKnown RBP21.38■■□□□ 1.01
HPS4-216ENST00000493455 LRP6O75581 1613 aa21.37■■□□□ 1.01
HPS4-216ENST00000493455 PPM1GO15355 546 aaPredicted RBP21.37■■□□□ 1.01
HPS4-216ENST00000493455 ANP32CO43423 234 aa21.37■■□□□ 1.01
HPS4-216ENST00000493455 KIAA0232Q92628 1395 aa21.36■■□□□ 1.01
HPS4-216ENST00000493455 CHRNA2Q15822 529 aa21.36■■□□□ 1.01
HPS4-216ENST00000493455 PRDM11Q9NQV5 511 aa21.36■■□□□ 1.01
HPS4-216ENST00000493455 RGPD5Q99666 1765 aa21.34■■□□□ 1.01
HPS4-216ENST00000493455 EMILIN1Q9Y6C2 1016 aa21.34■■□□□ 1.01
HPS4-216ENST00000493455 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
HPS4-216ENST00000493455 AMPHP49418 695 aa21.33■■□□□ 1.01
HPS4-216ENST00000493455 C8orf37Q96NL8 207 aa21.33■■□□□ 1.01
HPS4-216ENST00000493455 MAP3K19Q56UN5 1328 aa21.32■■□□□ 1
HPS4-216ENST00000493455 PLCH1Q4KWH8 1693 aa21.32■■□□□ 1
HPS4-216ENST00000493455 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
HPS4-216ENST00000493455 PEAK1Q9H792 1746 aa21.32■■□□□ 1
HPS4-216ENST00000493455 RALBP1Q15311 655 aa21.31■■□□□ 1
HPS4-216ENST00000493455 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
HPS4-216ENST00000493455 PPP2R1AP30153 589 aa21.3■■□□□ 1
HPS4-216ENST00000493455 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
HPS4-216ENST00000493455 AATKQ6ZMQ8 1374 aa21.3■■□□□ 1
HPS4-216ENST00000493455 FAM83GA6ND36 823 aa21.29■■□□□ 1
HPS4-216ENST00000493455 POLKQ9UBT6 870 aa21.29■■□□□ 1
HPS4-216ENST00000493455 CPDO75976 1380 aa21.28■■□□□ 1
HPS4-216ENST00000493455 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
HPS4-216ENST00000493455 NGLY1Q96IV0 654 aa21.28■■□□□ 1
HPS4-216ENST00000493455 MTHFSP49914 203 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms