RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 ADGRB2O60241 1585 aa20.51■□□□□ 0.87
KLF4-204ENST00000493306 OFD1O75665 1012 aa20.51■□□□□ 0.87
KLF4-204ENST00000493306 TMEM57Q8N5G2 664 aa20.51■□□□□ 0.87
KLF4-204ENST00000493306 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
KLF4-204ENST00000493306 NOB1Q9ULX3 412 aaKnown RBP20.5■□□□□ 0.87
KLF4-204ENST00000493306 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
KLF4-204ENST00000493306 KLHL40Q2TBA0 621 aa20.5■□□□□ 0.87
KLF4-204ENST00000493306 USP32Q8NFA0 1604 aa20.5■□□□□ 0.87
KLF4-204ENST00000493306 IPO8O15397 1037 aaKnown RBP20.49■□□□□ 0.87
KLF4-204ENST00000493306 DEPDC5O75140 1603 aa20.49■□□□□ 0.87
KLF4-204ENST00000493306 KIF16BQ96L93 1317 aa20.49■□□□□ 0.87
KLF4-204ENST00000493306 TERF1P54274 439 aa20.48■□□□□ 0.87
KLF4-204ENST00000493306 ABCC11Q96J66 1382 aa20.48■□□□□ 0.87
KLF4-204ENST00000493306 KIF2CQ99661 725 aa20.48■□□□□ 0.87
KLF4-204ENST00000493306 SSFA2P28290 1259 aa20.47■□□□□ 0.87
KLF4-204ENST00000493306 KIF1BO60333 1816 aa20.47■□□□□ 0.87
KLF4-204ENST00000493306 CLEC17AQ6ZS10 378 aa20.47■□□□□ 0.87
KLF4-204ENST00000493306 CFAP74Q9C0B2 1584 aa20.46■□□□□ 0.87
KLF4-204ENST00000493306 CD2BP2O95400 341 aaKnown RBP20.46■□□□□ 0.87
KLF4-204ENST00000493306 BAG4O95429 457 aaKnown RBP20.44■□□□□ 0.86
KLF4-204ENST00000493306 NOS1P29475 1434 aa20.44■□□□□ 0.86
KLF4-204ENST00000493306 NSD2O96028 1365 aa20.44■□□□□ 0.86
KLF4-204ENST00000493306 HS1BP3Q53T59 392 aa20.44■□□□□ 0.86
KLF4-204ENST00000493306 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
KLF4-204ENST00000493306 ZFYVE16Q7Z3T8 1539 aa20.44■□□□□ 0.86
KLF4-204ENST00000493306 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
KLF4-204ENST00000493306 GAS2L2Q8NHY3 880 aa20.43■□□□□ 0.86
KLF4-204ENST00000493306 MAP7D2Q96T17 732 aa20.43■□□□□ 0.86
KLF4-204ENST00000493306 IFT172Q9UG01 1749 aa20.43■□□□□ 0.86
KLF4-204ENST00000493306 UGGT1Q9NYU2 1555 aa20.43■□□□□ 0.86
KLF4-204ENST00000493306 IL16Q14005 1332 aa20.43■□□□□ 0.86
KLF4-204ENST00000493306 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
KLF4-204ENST00000493306 QRICH2Q9H0J4 1663 aa20.42■□□□□ 0.86
KLF4-204ENST00000493306 ZNF445P59923 1031 aa20.42■□□□□ 0.86
KLF4-204ENST00000493306 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
KLF4-204ENST00000493306 NRXN1Q9ULB1 1477 aa20.42■□□□□ 0.86
KLF4-204ENST00000493306 TBC1D9Q6ZT07 1266 aa20.41■□□□□ 0.86
KLF4-204ENST00000493306 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
KLF4-204ENST00000493306 VWDEQ8N2E2 1590 aa20.41■□□□□ 0.86
KLF4-204ENST00000493306 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
KLF4-204ENST00000493306 CALD1Q05682 793 aaKnown RBP20.41■□□□□ 0.86
KLF4-204ENST00000493306 ZC3H13Q5T200 1668 aaKnown RBP20.41■□□□□ 0.86
KLF4-204ENST00000493306 AFAP1Q8N556 730 aa20.4■□□□□ 0.86
KLF4-204ENST00000493306 RBM42Q9BTD8 480 aaKnown RBP20.4■□□□□ 0.86
KLF4-204ENST00000493306 TRIM35Q9UPQ4 493 aa20.4■□□□□ 0.86
KLF4-204ENST00000493306 CD109Q6YHK3 1445 aa20.4■□□□□ 0.86
KLF4-204ENST00000493306 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
KLF4-204ENST00000493306 R3HCC1Q9Y3T6 440 aaKnown RBP20.39■□□□□ 0.85
KLF4-204ENST00000493306 INO80Q9ULG1 1556 aaPredicted RBP20.39■□□□□ 0.85
KLF4-204ENST00000493306 KIF3BO15066 747 aa20.39■□□□□ 0.85
KLF4-204ENST00000493306 NCLP19338 710 aaKnown RBP20.39■□□□□ 0.85
KLF4-204ENST00000493306 RIPK4P57078 832 aa20.39■□□□□ 0.85
KLF4-204ENST00000493306 NUCB2P80303 420 aa20.39■□□□□ 0.85
KLF4-204ENST00000493306 RBM10P98175 930 aaKnown RBP20.39■□□□□ 0.85
KLF4-204ENST00000493306 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
KLF4-204ENST00000493306 PLEKHF1Q96S99 279 aa20.38■□□□□ 0.85
KLF4-204ENST00000493306 MCTP1Q6DN14 999 aa20.38■□□□□ 0.85
KLF4-204ENST00000493306 CAVIN1Q6NZI2 390 aaKnown RBP20.38■□□□□ 0.85
KLF4-204ENST00000493306 NOL7Q9UMY1 257 aaKnown RBP20.38■□□□□ 0.85
KLF4-204ENST00000493306 ARHGAP31Q2M1Z3 1444 aa20.38■□□□□ 0.85
KLF4-204ENST00000493306 ANKRD36BQ8N2N9 1353 aa20.37■□□□□ 0.85
KLF4-204ENST00000493306 ZNF500O60304 480 aaPredicted RBP20.36■□□□□ 0.85
KLF4-204ENST00000493306 CDC45O75419 566 aa20.36■□□□□ 0.85
KLF4-204ENST00000493306 ZSCAN23Q3MJ62 389 aa20.36■□□□□ 0.85
KLF4-204ENST00000493306 FAM13BQ9NYF5 915 aa20.36■□□□□ 0.85
KLF4-204ENST00000493306 MROH2AA6NES4 1674 aa20.36■□□□□ 0.85
KLF4-204ENST00000493306 RABEP1Q15276 862 aa20.35■□□□□ 0.85
KLF4-204ENST00000493306 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
KLF4-204ENST00000493306 MED14O60244 1454 aa20.34■□□□□ 0.85
KLF4-204ENST00000493306 CFAP44Q96MT7 982 aa20.34■□□□□ 0.85
KLF4-204ENST00000493306 PPIP5K1Q6PFW1 1433 aa20.34■□□□□ 0.85
KLF4-204ENST00000493306 CHGAP10645 457 aaKnown RBP20.33■□□□□ 0.85
KLF4-204ENST00000493306 PDLIM2Q96JY6 352 aa20.33■□□□□ 0.85
KLF4-204ENST00000493306 REREQ9P2R6 1566 aa20.33■□□□□ 0.85
KLF4-204ENST00000493306 CSPP1Q1MSJ5 1256 aa20.33■□□□□ 0.85
KLF4-204ENST00000493306 EVC2Q86UK5 1308 aa20.33■□□□□ 0.84
KLF4-204ENST00000493306 PUS7Q96PZ0 661 aaKnown RBP20.33■□□□□ 0.84
KLF4-204ENST00000493306 FGD1P98174 961 aa20.32■□□□□ 0.84
KLF4-204ENST00000493306 MTERF4Q7Z6M4 381 aaKnown RBP20.32■□□□□ 0.84
KLF4-204ENST00000493306 ZNF428Q96B54 188 aa20.32■□□□□ 0.84
KLF4-204ENST00000493306 C14orf93Q9H972 538 aaKnown RBP20.32■□□□□ 0.84
KLF4-204ENST00000493306 ATP7AQ04656 1500 aa20.32■□□□□ 0.84
KLF4-204ENST00000493306 UQCRHLA0A096LP55 91 aa20.32■□□□□ 0.84
KLF4-204ENST00000493306 UQCRHP07919 91 aa20.32■□□□□ 0.84
KLF4-204ENST00000493306 RBSNQ9H1K0 784 aa20.32■□□□□ 0.84
KLF4-204ENST00000493306 LMBRD1Q9NUN5 540 aa20.32■□□□□ 0.84
KLF4-204ENST00000493306 EFCAB6Q5THR3 1501 aa20.31■□□□□ 0.84
KLF4-204ENST00000493306 ZBTB7BO15156 539 aaPredicted RBP20.31■□□□□ 0.84
KLF4-204ENST00000493306 XPCQ01831 940 aaPredicted RBP20.31■□□□□ 0.84
KLF4-204ENST00000493306 MCM5P33992 734 aa20.3■□□□□ 0.84
KLF4-204ENST00000493306 ZKSCAN5Q9Y2L8 839 aa20.3■□□□□ 0.84
KLF4-204ENST00000493306 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
KLF4-204ENST00000493306 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
KLF4-204ENST00000493306 C1orf115Q9H7X2 142 aa20.29■□□□□ 0.84
KLF4-204ENST00000493306 CYP2E1P05181 493 aaPredicted RBP20.29■□□□□ 0.84
KLF4-204ENST00000493306 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
KLF4-204ENST00000493306 BRPF1P55201 1214 aaPredicted RBP20.29■□□□□ 0.84
KLF4-204ENST00000493306 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
KLF4-204ENST00000493306 ADGRB3O60242 1522 aa20.29■□□□□ 0.84
KLF4-204ENST00000493306 ADGRB1O14514 1584 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms