RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 CASC1Q6TDU7 716 aa8□□□□□ -1.13
NF1-215ENST00000493220 PNISRQ8TF01 805 aaKnown RBP8□□□□□ -1.13
NF1-215ENST00000493220 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
NF1-215ENST00000493220 FOXO3O43524 673 aa8□□□□□ -1.13
NF1-215ENST00000493220 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
NF1-215ENST00000493220 ABCC11Q96J66 1382 aa8□□□□□ -1.13
NF1-215ENST00000493220 KIDINS220Q9ULH0 1771 aa8□□□□□ -1.13
NF1-215ENST00000493220 SYNMO15061 1565 aa8□□□□□ -1.13
NF1-215ENST00000493220 TTC21BQ7Z4L5 1316 aa8□□□□□ -1.13
NF1-215ENST00000493220 RIPK4P57078 832 aa8□□□□□ -1.13
NF1-215ENST00000493220 GNAI1P63096 354 aa8□□□□□ -1.13
NF1-215ENST00000493220 RIMS1Q86UR5 1692 aaKnown RBP8□□□□□ -1.13
NF1-215ENST00000493220 ZFYVE9O95405 1425 aa7.99□□□□□ -1.13
NF1-215ENST00000493220 NGLY1Q96IV0 654 aa7.98□□□□□ -1.13
NF1-215ENST00000493220 PKNOX2Q96KN3 472 aa7.98□□□□□ -1.13
NF1-215ENST00000493220 REREQ9P2R6 1566 aa7.98□□□□□ -1.13
NF1-215ENST00000493220 ARHGEF10O15013 1369 aa7.98□□□□□ -1.13
NF1-215ENST00000493220 PTPRMP28827 1452 aa7.98□□□□□ -1.13
NF1-215ENST00000493220 PIK3C2GO75747 1445 aa7.98□□□□□ -1.13
NF1-215ENST00000493220 DDX58O95786 925 aaKnown RBP7.98□□□□□ -1.13
NF1-215ENST00000493220 LTKP29376 864 aa7.98□□□□□ -1.13
NF1-215ENST00000493220 RBM33Q96EV2 1170 aaKnown RBP7.98□□□□□ -1.13
NF1-215ENST00000493220 COL17A1Q9UMD9 1497 aaPredicted RBP7.98□□□□□ -1.13
NF1-215ENST00000493220 DISP3Q9P2K9 1392 aa7.97□□□□□ -1.13
NF1-215ENST00000493220 HMOX1P09601 288 aa7.97□□□□□ -1.13
NF1-215ENST00000493220 AMOTQ4VCS5 1084 aa7.97□□□□□ -1.13
NF1-215ENST00000493220 SMC4Q9NTJ3 1288 aa7.97□□□□□ -1.13
NF1-215ENST00000493220 FER1L4A9Z1Z3 1794 aa7.97□□□□□ -1.13
NF1-215ENST00000493220 ZC3H6P61129 1189 aaKnown RBP7.97□□□□□ -1.13
NF1-215ENST00000493220 TSPYL4Q9UJ04 414 aa7.97□□□□□ -1.13
NF1-215ENST00000493220 CLTCL1P53675 1640 aa7.97□□□□□ -1.13
NF1-215ENST00000493220 PPRC1Q5VV67 1664 aaKnown RBP7.96□□□□□ -1.13
NF1-215ENST00000493220 FAM135BQ49AJ0 1406 aa7.96□□□□□ -1.13
NF1-215ENST00000493220 SPATA31E1Q6ZUB1 1445 aa7.96□□□□□ -1.13
NF1-215ENST00000493220 MSH5O43196 834 aa7.96□□□□□ -1.13
NF1-215ENST00000493220 ADAMTS2O95450 1211 aa7.96□□□□□ -1.13
NF1-215ENST00000493220 CABP4P57796 275 aa7.96□□□□□ -1.13
NF1-215ENST00000493220 NME9Q86XW9 330 aa7.96□□□□□ -1.13
NF1-215ENST00000493220 USP35Q9P2H5 1018 aa7.96□□□□□ -1.13
NF1-215ENST00000493220 FBXO3Q9UK99 471 aa7.96□□□□□ -1.14
NF1-215ENST00000493220 CFAP44Q96MT7 982 aa7.96□□□□□ -1.14
NF1-215ENST00000493220 RRP7AQ9Y3A4 280 aaKnown RBP7.96□□□□□ -1.14
NF1-215ENST00000493220 LAMC1P11047 1609 aa7.96□□□□□ -1.14
NF1-215ENST00000493220 FCHSD2O94868 740 aa7.96□□□□□ -1.14
NF1-215ENST00000493220 GTF2E1P29083 439 aaPredicted RBP7.96□□□□□ -1.14
NF1-215ENST00000493220 NEXNQ0ZGT2 675 aa7.96□□□□□ -1.14
NF1-215ENST00000493220 NBR1Q14596 966 aa7.96□□□□□ -1.14
NF1-215ENST00000493220 ASXL1Q8IXJ9 1541 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 RICTORQ6R327 1708 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 RCAN3Q9UKA8 241 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 RRS1Q15050 365 aaKnown RBP7.95□□□□□ -1.14
NF1-215ENST00000493220 PLA2R1Q13018 1463 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 E9PCH4 1651 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 HSP90B1P14625 803 aaKnown RBP7.95□□□□□ -1.14
NF1-215ENST00000493220 PRKAR2BP31323 418 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 TAF7LQ5H9L4 462 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
NF1-215ENST00000493220 ZNF530Q6P9A1 599 aaPredicted RBP7.95□□□□□ -1.14
NF1-215ENST00000493220 SENP3-EIF4A1A0A087X0R7 540 aa7.94□□□□□ -1.14
NF1-215ENST00000493220 SLAIN2Q9P270 581 aa7.94□□□□□ -1.14
NF1-215ENST00000493220 EDC4Q6P2E9 1401 aaKnown RBP7.94□□□□□ -1.14
NF1-215ENST00000493220 HMMRO75330 724 aa7.94□□□□□ -1.14
NF1-215ENST00000493220 APAF1O14727 1248 aa7.94□□□□□ -1.14
NF1-215ENST00000493220 KDM5AP29375 1690 aaKnown RBP7.94□□□□□ -1.14
NF1-215ENST00000493220 PLCB2Q00722 1185 aa7.94□□□□□ -1.14
NF1-215ENST00000493220 ITPRIPQ8IWB1 547 aa7.94□□□□□ -1.14
NF1-215ENST00000493220 TMEM94Q12767 1356 aa7.94□□□□□ -1.14
NF1-215ENST00000493220 CEP170BQ9Y4F5 1589 aaPredicted RBP7.93□□□□□ -1.14
NF1-215ENST00000493220 ZBED9Q6R2W3 1325 aa7.93□□□□□ -1.14
NF1-215ENST00000493220 KIF6Q6ZMV9 814 aa7.93□□□□□ -1.14
NF1-215ENST00000493220 DCAF8L1A6NGE4 600 aa7.93□□□□□ -1.14
NF1-215ENST00000493220 DDX54Q8TDD1 881 aaKnown RBP7.93□□□□□ -1.14
NF1-215ENST00000493220 DIP2AQ14689 1571 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
NF1-215ENST00000493220 EXOC5O00471 708 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 ANP32AP39687 249 aaKnown RBP7.92□□□□□ -1.14
NF1-215ENST00000493220 GPATCH3Q96I76 525 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 PREX1Q8TCU6 1659 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 GNAT3A8MTJ3 354 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 SUPT16HQ9Y5B9 1047 aaKnown RBP7.92□□□□□ -1.14
NF1-215ENST00000493220 ANKARQ7Z5J8 1434 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 ANKRD24Q8TF21 1146 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 API5Q9BZZ5 524 aaKnown RBP7.92□□□□□ -1.14
NF1-215ENST00000493220 G3V3G9 751 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 DCAF8Q5TAQ9 597 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 CCDC30Q5VVM6 783 aa7.92□□□□□ -1.14
NF1-215ENST00000493220 METP08581 1390 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 SPATA31D1Q6ZQQ2 1576 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 MADDQ8WXG6 1647 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 EIF2S2P20042 333 aaKnown RBP7.91□□□□□ -1.14
NF1-215ENST00000493220 CFAP65Q6ZU64 1925 aaKnown RBP7.91□□□□□ -1.14
NF1-215ENST00000493220 RBM42Q9BTD8 480 aaKnown RBP7.91□□□□□ -1.14
NF1-215ENST00000493220 SBNO2Q9Y2G9 1366 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 DEPDC5O75140 1603 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 ERICH6BQ5W0A0 696 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 SLC4A10Q6U841 1118 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 RWDD1Q9H446 243 aaPredicted RBP7.91□□□□□ -1.14
NF1-215ENST00000493220 TMOD3Q9NYL9 352 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 CHMP3Q9Y3E7 222 aa7.91□□□□□ -1.14
NF1-215ENST00000493220 ANP32BQ92688 251 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms