RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 NNTQ13423 1086 aa13.33□□□□□ -0.28
COL12A1-209ENST00000493109 PARP9Q8IXQ6 854 aa13.33□□□□□ -0.28
COL12A1-209ENST00000493109 MPNDQ8N594 471 aa13.33□□□□□ -0.28
COL12A1-209ENST00000493109 ZFP42Q96MM3 310 aa13.33□□□□□ -0.28
COL12A1-209ENST00000493109 SPDYE5A6NIY4 337 aa13.32□□□□□ -0.28
COL12A1-209ENST00000493109 GMPRP36959 345 aa13.32□□□□□ -0.28
COL12A1-209ENST00000493109 VARSP26640 1264 aaKnown RBP13.31□□□□□ -0.28
COL12A1-209ENST00000493109 LYPD8Q6UX82 237 aa13.31□□□□□ -0.28
COL12A1-209ENST00000493109 TIMP2P16035 220 aa13.3□□□□□ -0.28
COL12A1-209ENST00000493109 GJA5P36382 358 aa13.3□□□□□ -0.28
COL12A1-209ENST00000493109 KLF16Q9BXK1 252 aaPredicted RBP13.3□□□□□ -0.28
COL12A1-209ENST00000493109 H3BM21 787 aa13.29□□□□□ -0.28
COL12A1-209ENST00000493109 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
COL12A1-209ENST00000493109 MAP10Q9P2G4 905 aa13.29□□□□□ -0.28
COL12A1-209ENST00000493109 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
COL12A1-209ENST00000493109 SPTLC1O15269 473 aa13.28□□□□□ -0.28
COL12A1-209ENST00000493109 SLC16A10Q8TF71 515 aa13.28□□□□□ -0.28
COL12A1-209ENST00000493109 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
COL12A1-209ENST00000493109 HRCP23327 699 aa13.27□□□□□ -0.29
COL12A1-209ENST00000493109 NPAS3Q8IXF0 933 aa13.27□□□□□ -0.29
COL12A1-209ENST00000493109 CTHP32929 405 aa13.26□□□□□ -0.29
COL12A1-209ENST00000493109 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
COL12A1-209ENST00000493109 TRIM66O15016 1216 aa13.25□□□□□ -0.29
COL12A1-209ENST00000493109 C4orf48Q5BLP8 95 aa13.25□□□□□ -0.29
COL12A1-209ENST00000493109 MRPL14Q6P1L8 145 aaKnown RBP13.25□□□□□ -0.29
COL12A1-209ENST00000493109 CABLES1Q8TDN4 633 aa13.25□□□□□ -0.29
COL12A1-209ENST00000493109 WDR4P57081 412 aaKnown RBP13.24□□□□□ -0.29
COL12A1-209ENST00000493109 SOBPA7XYQ1 873 aa13.23□□□□□ -0.29
COL12A1-209ENST00000493109 PER1O15534 1290 aaPredicted RBP13.23□□□□□ -0.29
COL12A1-209ENST00000493109 ADH1CP00326 375 aa13.23□□□□□ -0.29
COL12A1-209ENST00000493109 IRF7Q92985 503 aa13.23□□□□□ -0.29
COL12A1-209ENST00000493109 CDK15Q96Q40 435 aa13.23□□□□□ -0.29
COL12A1-209ENST00000493109 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
COL12A1-209ENST00000493109 NR3C2P08235 984 aa13.21□□□□□ -0.29
COL12A1-209ENST00000493109 FAM174AQ8TBP5 190 aa13.21□□□□□ -0.29
COL12A1-209ENST00000493109 ZBTB3Q9H5J0 574 aa13.21□□□□□ -0.29
COL12A1-209ENST00000493109 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
COL12A1-209ENST00000493109 ZFAND3Q9H8U3 227 aa13.2□□□□□ -0.3
COL12A1-209ENST00000493109 LIMD1Q9UGP4 676 aa13.19□□□□□ -0.3
COL12A1-209ENST00000493109 DIXDC1Q155Q3 683 aa13.18□□□□□ -0.3
COL12A1-209ENST00000493109 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
COL12A1-209ENST00000493109 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
COL12A1-209ENST00000493109 ZSCAN1Q8NBB4 408 aa13.17□□□□□ -0.3
COL12A1-209ENST00000493109 ITPKCQ96DU7 683 aa13.17□□□□□ -0.3
COL12A1-209ENST00000493109 GRM5P41594 1212 aa13.16□□□□□ -0.3
COL12A1-209ENST00000493109 QPCTQ16769 361 aa13.16□□□□□ -0.3
COL12A1-209ENST00000493109 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
COL12A1-209ENST00000493109 ARID5BQ14865 1188 aa13.15□□□□□ -0.3
COL12A1-209ENST00000493109 SCARF1Q14162 830 aa13.14□□□□□ -0.31
COL12A1-209ENST00000493109 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
COL12A1-209ENST00000493109 AK7Q96M32 723 aa13.13□□□□□ -0.31
COL12A1-209ENST00000493109 VSIG8P0DPA2 414 aa13.11□□□□□ -0.31
COL12A1-209ENST00000493109 SH3RF1Q7Z6J0 888 aa13.11□□□□□ -0.31
COL12A1-209ENST00000493109 C1QTNF2Q9BXJ5 285 aa13.11□□□□□ -0.31
COL12A1-209ENST00000493109 LILRB3O75022 631 aa13.1□□□□□ -0.31
COL12A1-209ENST00000493109 NR5A1Q13285 461 aa13.1□□□□□ -0.31
COL12A1-209ENST00000493109 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
COL12A1-209ENST00000493109 BPHLQ86WA6 291 aaPredicted RBP13.08□□□□□ -0.32
COL12A1-209ENST00000493109 PDE4DQ08499 809 aa13.07□□□□□ -0.32
COL12A1-209ENST00000493109 AGERQ15109 404 aa13.07□□□□□ -0.32
COL12A1-209ENST00000493109 TUSC1Q2TAM9 212 aa13.07□□□□□ -0.32
COL12A1-209ENST00000493109 RTL5Q5HYW3 569 aaPredicted RBP13.07□□□□□ -0.32
COL12A1-209ENST00000493109 MEIOBQ8N635 442 aa13.07□□□□□ -0.32
COL12A1-209ENST00000493109 TSC1Q92574 1164 aa13.07□□□□□ -0.32
COL12A1-209ENST00000493109 FAM181BA6NEQ2 426 aa13.06□□□□□ -0.32
COL12A1-209ENST00000493109 SH3BP5LQ7L8J4 393 aa13.06□□□□□ -0.32
COL12A1-209ENST00000493109 LINC00528Q8N1L1 170 aa13.04□□□□□ -0.32
COL12A1-209ENST00000493109 FSHRP23945 695 aa13.03□□□□□ -0.32
COL12A1-209ENST00000493109 DNMT3LQ9UJW3 386 aa13.03□□□□□ -0.32
COL12A1-209ENST00000493109 NUTM2BA6NNL0 878 aaPredicted RBP13.02□□□□□ -0.33
COL12A1-209ENST00000493109 NUTM2EB1AL46 878 aaPredicted RBP13.02□□□□□ -0.33
COL12A1-209ENST00000493109 MAN1A2O60476 641 aa13.02□□□□□ -0.33
COL12A1-209ENST00000493109 NUTM2DQ5VT03 806 aaPredicted RBP13.02□□□□□ -0.33
COL12A1-209ENST00000493109 NUTM2AQ8IVF1 878 aaPredicted RBP13.02□□□□□ -0.33
COL12A1-209ENST00000493109 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.33
COL12A1-209ENST00000493109 MAP4K5Q9Y4K4 846 aa13.02□□□□□ -0.33
COL12A1-209ENST00000493109 SOS2Q07890 1332 aaPredicted RBP13.02□□□□□ -0.33
COL12A1-209ENST00000493109 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
COL12A1-209ENST00000493109 BMP2P12643 396 aa13□□□□□ -0.33
COL12A1-209ENST00000493109 MAGEB6P1A0A0J9YX57 407 aa12.97□□□□□ -0.33
COL12A1-209ENST00000493109 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
COL12A1-209ENST00000493109 NBPF14Q5TI25 921 aa12.97□□□□□ -0.33
COL12A1-209ENST00000493109 VASH1Q7L8A9 365 aaPredicted RBP12.97□□□□□ -0.33
COL12A1-209ENST00000493109 ARMC2Q8NEN0 867 aa12.97□□□□□ -0.33
COL12A1-209ENST00000493109 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
COL12A1-209ENST00000493109 FBXO31Q5XUX0 539 aaPredicted RBP12.96□□□□□ -0.33
COL12A1-209ENST00000493109 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
COL12A1-209ENST00000493109 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
COL12A1-209ENST00000493109 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
COL12A1-209ENST00000493109 CCDC116Q8IYX3 515 aa12.94□□□□□ -0.34
COL12A1-209ENST00000493109 KRT76Q01546 638 aa12.93□□□□□ -0.34
COL12A1-209ENST00000493109 CTDSPL2Q05D32 466 aa12.93□□□□□ -0.34
COL12A1-209ENST00000493109 UPP2O95045 317 aa12.92□□□□□ -0.34
COL12A1-209ENST00000493109 GPR161Q8N6U8 529 aaKnown RBP12.92□□□□□ -0.34
COL12A1-209ENST00000493109 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
COL12A1-209ENST00000493109 CBLBQ13191 982 aa12.91□□□□□ -0.34
COL12A1-209ENST00000493109 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
COL12A1-209ENST00000493109 GSK3AP49840 483 aa12.9□□□□□ -0.34
COL12A1-209ENST00000493109 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
COL12A1-209ENST00000493109 PPP1R26Q5T8A7 1209 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms