RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 MED1Q15648 1581 aaPredicted RBP19.45■□□□□ 0.7
CCM2-217ENST00000492883 NUTM2GQ5VZR2 741 aa19.45■□□□□ 0.7
CCM2-217ENST00000492883 SHPRHQ149N8 1683 aa19.44■□□□□ 0.7
CCM2-217ENST00000492883 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
CCM2-217ENST00000492883 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
CCM2-217ENST00000492883 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
CCM2-217ENST00000492883 LRP6O75581 1613 aa19.43■□□□□ 0.7
CCM2-217ENST00000492883 USP6P35125 1406 aa19.43■□□□□ 0.7
CCM2-217ENST00000492883 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
CCM2-217ENST00000492883 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
CCM2-217ENST00000492883 NGLY1Q96IV0 654 aa19.42■□□□□ 0.7
CCM2-217ENST00000492883 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
CCM2-217ENST00000492883 NLRP13Q86W25 1043 aa19.41■□□□□ 0.7
CCM2-217ENST00000492883 TTC21BQ7Z4L5 1316 aa19.41■□□□□ 0.7
CCM2-217ENST00000492883 NLRP6P59044 892 aa19.4■□□□□ 0.7
CCM2-217ENST00000492883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCM2-217ENST00000492883 ZEB1P37275 1124 aaPredicted RBP19.38■□□□□ 0.69
CCM2-217ENST00000492883 TTC21AQ8NDW8 1320 aa19.38■□□□□ 0.69
CCM2-217ENST00000492883 SSH2Q76I76 1423 aa19.37■□□□□ 0.69
CCM2-217ENST00000492883 A0A1W2PP64 1363 aa19.37■□□□□ 0.69
CCM2-217ENST00000492883 ZNF772Q68DY9 489 aaPredicted RBP19.37■□□□□ 0.69
CCM2-217ENST00000492883 RGS17Q9UGC6 210 aaPredicted RBP19.37■□□□□ 0.69
CCM2-217ENST00000492883 COL22A1Q8NFW1 1626 aaPredicted RBP19.36■□□□□ 0.69
CCM2-217ENST00000492883 AFF2P51816 1311 aa19.36■□□□□ 0.69
CCM2-217ENST00000492883 C11orf95C9JLR9 678 aaPredicted RBP19.36■□□□□ 0.69
CCM2-217ENST00000492883 TRPM3Q9HCF6 1732 aaPredicted RBP19.36■□□□□ 0.69
CCM2-217ENST00000492883 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
CCM2-217ENST00000492883 ANKRD36BQ8N2N9 1353 aa19.35■□□□□ 0.69
CCM2-217ENST00000492883 USP21Q9UK80 565 aa19.34■□□□□ 0.69
CCM2-217ENST00000492883 GCP02774 474 aa19.33■□□□□ 0.68
CCM2-217ENST00000492883 ZC3H6P61129 1189 aaKnown RBP19.33■□□□□ 0.68
CCM2-217ENST00000492883 NME9Q86XW9 330 aa19.33■□□□□ 0.68
CCM2-217ENST00000492883 FNBP4Q8N3X1 1017 aaPredicted RBP19.33■□□□□ 0.68
CCM2-217ENST00000492883 EDC4Q6P2E9 1401 aaKnown RBP19.33■□□□□ 0.68
CCM2-217ENST00000492883 FAM83GA6ND36 823 aa19.32■□□□□ 0.68
CCM2-217ENST00000492883 PRDM11Q9NQV5 511 aa19.32■□□□□ 0.68
CCM2-217ENST00000492883 USP19O94966 1318 aa19.31■□□□□ 0.68
CCM2-217ENST00000492883 ALS2Q96Q42 1657 aa19.31■□□□□ 0.68
CCM2-217ENST00000492883 POTEAQ6S8J7 498 aa19.31■□□□□ 0.68
CCM2-217ENST00000492883 ZRANB1Q9UGI0 708 aa19.31■□□□□ 0.68
CCM2-217ENST00000492883 QTRT2Q9H974 415 aaKnown RBP19.3■□□□□ 0.68
CCM2-217ENST00000492883 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
CCM2-217ENST00000492883 SOX12O15370 315 aa19.29■□□□□ 0.68
CCM2-217ENST00000492883 KCNH5Q8NCM2 988 aa19.29■□□□□ 0.68
CCM2-217ENST00000492883 ZBTB7CA1YPR0 619 aa19.28■□□□□ 0.68
CCM2-217ENST00000492883 CARD14Q9BXL6 1004 aa19.28■□□□□ 0.68
CCM2-217ENST00000492883 PANK3Q9H999 370 aa19.28■□□□□ 0.68
CCM2-217ENST00000492883 KIAA0232Q92628 1395 aa19.28■□□□□ 0.68
CCM2-217ENST00000492883 CHRNA2Q15822 529 aa19.27■□□□□ 0.68
CCM2-217ENST00000492883 UNC5CLQ8IV45 518 aa19.27■□□□□ 0.68
CCM2-217ENST00000492883 COG3Q96JB2 828 aa19.27■□□□□ 0.68
CCM2-217ENST00000492883 USP31Q70CQ4 1352 aa19.27■□□□□ 0.68
CCM2-217ENST00000492883 BTG4Q9NY30 223 aa19.26■□□□□ 0.67
CCM2-217ENST00000492883 TRPC5Q9UL62 973 aaPredicted RBP19.26■□□□□ 0.67
CCM2-217ENST00000492883 AKAP12Q02952 1782 aa19.25■□□□□ 0.67
CCM2-217ENST00000492883 FYB1O15117 783 aa19.25■□□□□ 0.67
CCM2-217ENST00000492883 RXRBP28702 533 aa19.24■□□□□ 0.67
CCM2-217ENST00000492883 ILDR2Q71H61 639 aa19.24■□□□□ 0.67
CCM2-217ENST00000492883 GGNBP2Q9H3C7 697 aa19.24■□□□□ 0.67
CCM2-217ENST00000492883 CCDC9Q9Y3X0 531 aaKnown RBP19.23■□□□□ 0.67
CCM2-217ENST00000492883 NSD3Q9BZ95 1437 aa19.23■□□□□ 0.67
CCM2-217ENST00000492883 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
CCM2-217ENST00000492883 BCL9LQ86UU0 1499 aa19.22■□□□□ 0.67
CCM2-217ENST00000492883 CPDO75976 1380 aa19.22■□□□□ 0.67
CCM2-217ENST00000492883 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
CCM2-217ENST00000492883 SLIT2O94813 1529 aa19.22■□□□□ 0.67
CCM2-217ENST00000492883 EVA1CP58658 441 aa19.22■□□□□ 0.67
CCM2-217ENST00000492883 MON2Q7Z3U7 1717 aa19.22■□□□□ 0.67
CCM2-217ENST00000492883 CGNL1Q0VF96 1302 aa19.22■□□□□ 0.67
CCM2-217ENST00000492883 RBM6P78332 1123 aaKnown RBP19.21■□□□□ 0.67
CCM2-217ENST00000492883 NRKQ7Z2Y5 1582 aa19.21■□□□□ 0.67
CCM2-217ENST00000492883 ARHGEF25Q86VW2 580 aa19.21■□□□□ 0.67
CCM2-217ENST00000492883 PIK3C2AO00443 1686 aa19.2■□□□□ 0.66
CCM2-217ENST00000492883 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
CCM2-217ENST00000492883 VPS72Q15906 364 aa19.19■□□□□ 0.66
CCM2-217ENST00000492883 GJD4Q96KN9 370 aaPredicted RBP19.19■□□□□ 0.66
CCM2-217ENST00000492883 KNSTRNQ9Y448 316 aa19.19■□□□□ 0.66
CCM2-217ENST00000492883 SLIT3O75094 1523 aa19.19■□□□□ 0.66
CCM2-217ENST00000492883 OVOS2A0A0J9YW53 1432 aa19.17■□□□□ 0.66
CCM2-217ENST00000492883 OVOS2Q6IE36 1432 aa19.17■□□□□ 0.66
CCM2-217ENST00000492883 ABCA3Q99758 1704 aa19.17■□□□□ 0.66
CCM2-217ENST00000492883 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
CCM2-217ENST00000492883 ATRNO75882 1429 aa19.17■□□□□ 0.66
CCM2-217ENST00000492883 PHRF1Q9P1Y6 1649 aaKnown RBP19.16■□□□□ 0.66
CCM2-217ENST00000492883 MYOM1P52179 1685 aa19.16■□□□□ 0.66
CCM2-217ENST00000492883 CRYBG1Q9Y4K1 1723 aa19.15■□□□□ 0.66
CCM2-217ENST00000492883 FBLN1P23142 703 aa19.15■□□□□ 0.66
CCM2-217ENST00000492883 AXIN2Q9Y2T1 843 aa19.15■□□□□ 0.66
CCM2-217ENST00000492883 MARF1Q9Y4F3 1742 aaKnown RBP19.14■□□□□ 0.65
CCM2-217ENST00000492883 COL14A1Q05707 1796 aaKnown RBP19.14■□□□□ 0.65
CCM2-217ENST00000492883 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
CCM2-217ENST00000492883 AMPHP49418 695 aa19.12■□□□□ 0.65
CCM2-217ENST00000492883 LARP1Q6PKG0 1096 aaKnown RBP19.12■□□□□ 0.65
CCM2-217ENST00000492883 USP35Q9P2H5 1018 aa19.12■□□□□ 0.65
CCM2-217ENST00000492883 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
CCM2-217ENST00000492883 CAMTA1Q9Y6Y1 1673 aa19.11■□□□□ 0.65
CCM2-217ENST00000492883 NFAT5O94916 1531 aa19.1■□□□□ 0.65
CCM2-217ENST00000492883 MAP3K19Q56UN5 1328 aa19.1■□□□□ 0.65
CCM2-217ENST00000492883 SPATA31A5Q5VU36 1347 aa19.1■□□□□ 0.65
CCM2-217ENST00000492883 SPATA31A7Q8IWB4 1347 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms