RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ZNF511Q8NB15 262 aa7.13□□□□□ -1.27
HMGB1P30-201ENST00000492455 BAP1Q92560 729 aa7.13□□□□□ -1.27
HMGB1P30-201ENST00000492455 FDX1P10109 184 aa7.12□□□□□ -1.27
HMGB1P30-201ENST00000492455 CLCN1P35523 988 aa7.12□□□□□ -1.27
HMGB1P30-201ENST00000492455 FAM174AQ8TBP5 190 aa7.12□□□□□ -1.27
HMGB1P30-201ENST00000492455 GPCPD1Q9NPB8 672 aa7.12□□□□□ -1.27
HMGB1P30-201ENST00000492455 EVA1BQ9NVM1 165 aa7.12□□□□□ -1.27
HMGB1P30-201ENST00000492455 TULP1O00294 542 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P30-201ENST00000492455 RASSF7Q02833 373 aa7.11□□□□□ -1.27
HMGB1P30-201ENST00000492455 KCNH2Q12809 1159 aa7.11□□□□□ -1.27
HMGB1P30-201ENST00000492455 C6orf118Q5T5N4 469 aa7.11□□□□□ -1.27
HMGB1P30-201ENST00000492455 IRF6O14896 467 aa7.1□□□□□ -1.27
HMGB1P30-201ENST00000492455 PPFIA3O75145 1194 aa7.09□□□□□ -1.27
HMGB1P30-201ENST00000492455 BMP2P12643 396 aa7.09□□□□□ -1.27
HMGB1P30-201ENST00000492455 ARID5BQ14865 1188 aa7.09□□□□□ -1.27
HMGB1P30-201ENST00000492455 MINK1Q8N4C8 1332 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P30-201ENST00000492455 ZIC2O95409 532 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P30-201ENST00000492455 FAM217BQ9NTX9 383 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P30-201ENST00000492455 CTHP32929 405 aa7.07□□□□□ -1.28
HMGB1P30-201ENST00000492455 GSK3AP49840 483 aa7.07□□□□□ -1.28
HMGB1P30-201ENST00000492455 SPDYE5A6NIY4 337 aa7.06□□□□□ -1.28
HMGB1P30-201ENST00000492455 SPTLC1O15269 473 aa7.06□□□□□ -1.28
HMGB1P30-201ENST00000492455 NR5A1Q13285 461 aa7.06□□□□□ -1.28
HMGB1P30-201ENST00000492455 PRR7Q8TB68 274 aa7.06□□□□□ -1.28
HMGB1P30-201ENST00000492455 ADAMTS8Q9UP79 889 aa7.06□□□□□ -1.28
HMGB1P30-201ENST00000492455 IGHA1P01876 353 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 AGERQ15109 404 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 DESI1Q6ICB0 168 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 CNTNAP3BQ96NU0 1288 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 KLF16Q9BXK1 252 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 CNTNAP3Q9BZ76 1288 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 ZFAND3Q9H8U3 227 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 PCDHGC3Q9UN70 934 aa7.05□□□□□ -1.28
HMGB1P30-201ENST00000492455 MTMR2Q13614 643 aa7.04□□□□□ -1.28
HMGB1P30-201ENST00000492455 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
HMGB1P30-201ENST00000492455 SVOPQ8N4V2 548 aa7.04□□□□□ -1.28
HMGB1P30-201ENST00000492455 CCDC102AQ96A19 550 aa7.04□□□□□ -1.28
HMGB1P30-201ENST00000492455 ITPKCQ96DU7 683 aa7.04□□□□□ -1.28
HMGB1P30-201ENST00000492455 CDK15Q96Q40 435 aa7.04□□□□□ -1.28
HMGB1P30-201ENST00000492455 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.03□□□□□ -1.28
HMGB1P30-201ENST00000492455 DNMT3AQ9Y6K1 912 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P30-201ENST00000492455 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
HMGB1P30-201ENST00000492455 FOXK2Q01167 660 aa7.01□□□□□ -1.29
HMGB1P30-201ENST00000492455 MEIOBQ8N635 442 aa7.01□□□□□ -1.29
HMGB1P30-201ENST00000492455 BCANQ96GW7 911 aa7.01□□□□□ -1.29
HMGB1P30-201ENST00000492455 TSEN34Q9BSV6 310 aaKnown RBP7.01□□□□□ -1.29
HMGB1P30-201ENST00000492455 DNMT3LQ9UJW3 386 aa7.01□□□□□ -1.29
HMGB1P30-201ENST00000492455 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P30-201ENST00000492455 IRS1P35568 1242 aa7□□□□□ -1.29
HMGB1P30-201ENST00000492455 KANK3Q6NY19 840 aa7□□□□□ -1.29
HMGB1P30-201ENST00000492455 BPHLQ86WA6 291 aaPredicted RBP7□□□□□ -1.29
HMGB1P30-201ENST00000492455 SPIRE2Q8WWL2 714 aa7□□□□□ -1.29
HMGB1P30-201ENST00000492455 COL25A1Q9BXS0 654 aaPredicted RBP7□□□□□ -1.29
HMGB1P30-201ENST00000492455 NR3C2P08235 984 aa6.99□□□□□ -1.29
HMGB1P30-201ENST00000492455 NDUFV2P19404 249 aa6.99□□□□□ -1.29
HMGB1P30-201ENST00000492455 FOXJ1Q92949 421 aa6.99□□□□□ -1.29
HMGB1P30-201ENST00000492455 MOXD2PA6NHM9 499 aa6.98□□□□□ -1.29
HMGB1P30-201ENST00000492455 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
HMGB1P30-201ENST00000492455 KRT76Q01546 638 aa6.98□□□□□ -1.29
HMGB1P30-201ENST00000492455 LYPD8Q6UX82 237 aa6.98□□□□□ -1.29
HMGB1P30-201ENST00000492455 SCARF2Q96GP6 870 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P30-201ENST00000492455 SSTR3P32745 418 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P30-201ENST00000492455 PTSQ03393 145 aa6.97□□□□□ -1.29
HMGB1P30-201ENST00000492455 ZNF385CQ66K41 422 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P30-201ENST00000492455 GPR161Q8N6U8 529 aaKnown RBP6.97□□□□□ -1.29
HMGB1P30-201ENST00000492455 EMILIN1Q9Y6C2 1016 aa6.97□□□□□ -1.29
HMGB1P30-201ENST00000492455 FSHRP23945 695 aa6.96□□□□□ -1.3
HMGB1P30-201ENST00000492455 GRM5P41594 1212 aa6.96□□□□□ -1.3
HMGB1P30-201ENST00000492455 NANOS1Q8WY41 292 aaKnown RBP6.96□□□□□ -1.3
HMGB1P30-201ENST00000492455 TTLL12Q14166 644 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P30-201ENST00000492455 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
HMGB1P30-201ENST00000492455 VASH1Q7L8A9 365 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P30-201ENST00000492455 ARMC2Q8NEN0 867 aa6.95□□□□□ -1.3
HMGB1P30-201ENST00000492455 MAP10Q9P2G4 905 aa6.95□□□□□ -1.3
HMGB1P30-201ENST00000492455 CDC14CA4D256 554 aa6.94□□□□□ -1.3
HMGB1P30-201ENST00000492455 MAP3K10Q02779 954 aa6.94□□□□□ -1.3
HMGB1P30-201ENST00000492455 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
HMGB1P30-201ENST00000492455 FIGNL2A6NMB9 653 aa6.93□□□□□ -1.3
HMGB1P30-201ENST00000492455 GJA5P36382 358 aa6.93□□□□□ -1.3
HMGB1P30-201ENST00000492455 NBPF14Q5TI25 921 aa6.93□□□□□ -1.3
HMGB1P30-201ENST00000492455 SV2AQ7L0J3 742 aa6.93□□□□□ -1.3
HMGB1P30-201ENST00000492455 CCDC116Q8IYX3 515 aa6.93□□□□□ -1.3
HMGB1P30-201ENST00000492455 PGPEP1Q9NXJ5 209 aa6.93□□□□□ -1.3
HMGB1P30-201ENST00000492455 MAP4K5Q9Y4K4 846 aa6.93□□□□□ -1.3
HMGB1P30-201ENST00000492455 SLURP2P0DP57 97 aa6.92□□□□□ -1.3
HMGB1P30-201ENST00000492455 RNFT1Q5M7Z0 435 aa6.92□□□□□ -1.3
HMGB1P30-201ENST00000492455 ZBTB3Q9H5J0 574 aa6.92□□□□□ -1.3
HMGB1P30-201ENST00000492455 F12P00748 615 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P30-201ENST00000492455 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
HMGB1P30-201ENST00000492455 ENAMQ9NRM1 1142 aa6.91□□□□□ -1.3
HMGB1P30-201ENST00000492455 CFAP99D6REC4 459 aa6.9□□□□□ -1.3
HMGB1P30-201ENST00000492455 ARHGEF15O94989 841 aa6.9□□□□□ -1.3
HMGB1P30-201ENST00000492455 ITGA6P23229 1130 aa6.9□□□□□ -1.3
HMGB1P30-201ENST00000492455 VWA5B2Q8N398 1253 aa6.9□□□□□ -1.3
HMGB1P30-201ENST00000492455 WHAMMQ8TF30 809 aa6.9□□□□□ -1.3
HMGB1P30-201ENST00000492455 MAGEB6P1A0A0J9YX57 407 aa6.89□□□□□ -1.31
HMGB1P30-201ENST00000492455 MSTNO14793 375 aa6.89□□□□□ -1.31
HMGB1P30-201ENST00000492455 XP32Q5T750 250 aa6.89□□□□□ -1.31
HMGB1P30-201ENST00000492455 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms