RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 SPATA31E1Q6ZUB1 1445 aa5.78□□□□□ -1.48
TRA2B-215ENST00000492417 ABCC11Q96J66 1382 aa5.78□□□□□ -1.48
TRA2B-215ENST00000492417 ZNF530Q6P9A1 599 aaPredicted RBP5.78□□□□□ -1.48
TRA2B-215ENST00000492417 TTC5Q8N0Z6 440 aa5.78□□□□□ -1.48
TRA2B-215ENST00000492417 KLHL34Q8N239 644 aa5.78□□□□□ -1.48
TRA2B-215ENST00000492417 RBM42Q9BTD8 480 aaKnown RBP5.78□□□□□ -1.48
TRA2B-215ENST00000492417 SUPT16HQ9Y5B9 1047 aaKnown RBP5.78□□□□□ -1.48
TRA2B-215ENST00000492417 MADDQ8WXG6 1647 aa5.77□□□□□ -1.49
TRA2B-215ENST00000492417 FTSJ3Q8IY81 847 aaKnown RBP5.77□□□□□ -1.49
TRA2B-215ENST00000492417 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.77□□□□□ -1.49
TRA2B-215ENST00000492417 CERKQ8TCT0 537 aa5.77□□□□□ -1.49
TRA2B-215ENST00000492417 CARD14Q9BXL6 1004 aa5.77□□□□□ -1.49
TRA2B-215ENST00000492417 BTG4Q9NY30 223 aa5.77□□□□□ -1.49
TRA2B-215ENST00000492417 KIF13AQ9H1H9 1805 aa5.77□□□□□ -1.49
TRA2B-215ENST00000492417 ANKRD24Q8TF21 1146 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 CLUAP1Q96AJ1 413 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 RALGAPBQ86X10 1494 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 AGLP35573 1532 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 SF3B2Q13435 895 aaKnown RBP5.76□□□□□ -1.49
TRA2B-215ENST00000492417 PLEKHO1Q53GL0 409 aaPredicted RBP5.76□□□□□ -1.49
TRA2B-215ENST00000492417 SLC4A10Q6U841 1118 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 TCP11L2Q8N4U5 519 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 TRPM2O94759 1503 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 DCTN1Q14203 1278 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 THUMPD2Q9BTF0 503 aaKnown RBP5.76□□□□□ -1.49
TRA2B-215ENST00000492417 TET3O43151 1660 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 GOLGA2Q08379 1002 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 A0A1W2PP64 1363 aa5.76□□□□□ -1.49
TRA2B-215ENST00000492417 SETD1BQ9UPS6 1966 aaKnown RBP5.75□□□□□ -1.49
TRA2B-215ENST00000492417 FRMPD1Q5SYB0 1578 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 PRR36Q9H6K5 1346 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 BRINP3Q76B58 766 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 MIS18AQ9NYP9 233 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 SMG6Q86US8 1419 aaKnown RBP5.75□□□□□ -1.49
TRA2B-215ENST00000492417 PTCD1O75127 700 aaKnown RBP5.75□□□□□ -1.49
TRA2B-215ENST00000492417 GTF2E1P29083 439 aaPredicted RBP5.75□□□□□ -1.49
TRA2B-215ENST00000492417 LMOD3Q0VAK6 560 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 MPRIPQ6WCQ1 1025 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 RUNDC1Q96C34 613 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 ACSBG1Q96GR2 724 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 STK31Q9BXU1 1019 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 TSPYL4Q9UJ04 414 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 RNF17Q9BXT8 1623 aaKnown RBP5.75□□□□□ -1.49
TRA2B-215ENST00000492417 EXOC5O00471 708 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 PIAS4Q8N2W9 510 aaPredicted RBP5.75□□□□□ -1.49
TRA2B-215ENST00000492417 PPRC1Q5VV67 1664 aaKnown RBP5.75□□□□□ -1.49
TRA2B-215ENST00000492417 CLTCL1P53675 1640 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 CAMSAP1Q5T5Y3 1602 aa5.75□□□□□ -1.49
TRA2B-215ENST00000492417 ZMYM4Q5VZL5 1548 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 RICTORQ6R327 1708 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 CROCC2H7BZ55 1655 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 FAM177BA6PVY3 158 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 CALD1Q05682 793 aaKnown RBP5.74□□□□□ -1.49
TRA2B-215ENST00000492417 AIMP1Q12904 312 aaKnown RBP5.74□□□□□ -1.49
TRA2B-215ENST00000492417 MYH16Q9H6N6 1097 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 IQGAP3Q86VI3 1631 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 CABP4P57796 275 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 AEBP1Q8IUX7 1158 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 SMC4Q9NTJ3 1288 aa5.74□□□□□ -1.49
TRA2B-215ENST00000492417 PPP1R1BQ9UD71 204 aaPredicted RBP5.74□□□□□ -1.49
TRA2B-215ENST00000492417 MAP3K19Q56UN5 1328 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 E9PCH4 1651 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 APBB1O00213 710 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 FAM98CQ17RN3 349 aaKnown RBP5.73□□□□□ -1.49
TRA2B-215ENST00000492417 MCM10Q7L590 875 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 SPG7Q9UQ90 795 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 KIF1BO60333 1816 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 PIK3C2GO75747 1445 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 ANKRD36BQ8N2N9 1353 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 TTC21AQ8NDW8 1320 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 HSPA1LP34931 641 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 GAS2L2Q8NHY3 880 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 CCDC136Q96JN2 1154 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 POLKQ9UBT6 870 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 USP21Q9UK80 565 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 CHMP3Q9Y3E7 222 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 FAM182BQ5T319 152 aa5.73□□□□□ -1.49
TRA2B-215ENST00000492417 PLEKHG3A1L390 1219 aa5.72□□□□□ -1.49
TRA2B-215ENST00000492417 TSR2Q969E8 191 aaKnown RBP5.72□□□□□ -1.49
TRA2B-215ENST00000492417 UNC13BO14795 1591 aa5.72□□□□□ -1.49
TRA2B-215ENST00000492417 PRKCSHP14314 528 aaPredicted RBP5.72□□□□□ -1.49
TRA2B-215ENST00000492417 CDCA7LQ96GN5 454 aa5.72□□□□□ -1.49
TRA2B-215ENST00000492417 FER1L4A9Z1Z3 1794 aa5.72□□□□□ -1.49
TRA2B-215ENST00000492417 FAM83GA6ND36 823 aa5.72□□□□□ -1.49
TRA2B-215ENST00000492417 NPM3O75607 178 aaKnown RBP5.72□□□□□ -1.49
TRA2B-215ENST00000492417 DDB1Q16531 1140 aa5.72□□□□□ -1.49
TRA2B-215ENST00000492417 SIRT1Q96EB6 747 aa5.72□□□□□ -1.49
TRA2B-215ENST00000492417 EIF2AK4Q9P2K8 1649 aaKnown RBP5.71□□□□□ -1.49
TRA2B-215ENST00000492417 PLIN1O60240 522 aa5.71□□□□□ -1.5
TRA2B-215ENST00000492417 OS9Q13438 667 aaPredicted RBP5.71□□□□□ -1.5
TRA2B-215ENST00000492417 EIF4A2Q14240 407 aaKnown RBP5.71□□□□□ -1.5
TRA2B-215ENST00000492417 PIK3C2BO00750 1634 aa5.71□□□□□ -1.5
TRA2B-215ENST00000492417 ADGRB3O60242 1522 aa5.71□□□□□ -1.5
TRA2B-215ENST00000492417 CEP170BQ9Y4F5 1589 aaPredicted RBP5.71□□□□□ -1.5
TRA2B-215ENST00000492417 HOXC9P31274 260 aa5.71□□□□□ -1.5
TRA2B-215ENST00000492417 ITPRIPQ8IWB1 547 aa5.71□□□□□ -1.5
TRA2B-215ENST00000492417 PNISRQ8TF01 805 aaKnown RBP5.7□□□□□ -1.5
TRA2B-215ENST00000492417 EYA1Q99502 592 aa5.7□□□□□ -1.5
TRA2B-215ENST00000492417 QTRT2Q9H974 415 aaKnown RBP5.7□□□□□ -1.5
TRA2B-215ENST00000492417 RCAN3Q9UKA8 241 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms